RNA–Protein interactions for RNA: ENST00000576952.1

POLR2A-208, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-208ENST00000576952 SMC5Q8IY18 1101 aa18.5■□□□□ 0.55
POLR2A-208ENST00000576952 PI4K2BQ8TCG2 481 aa18.5■□□□□ 0.55
POLR2A-208ENST00000576952 PTPN18Q99952 460 aa18.5■□□□□ 0.55
POLR2A-208ENST00000576952 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.5■□□□□ 0.552e-13■■■□□ 16.2
POLR2A-208ENST00000576952 DHX36Q9H2U1 1008 aaKnown RBP18.5■□□□□ 0.55
POLR2A-208ENST00000576952 TESPA1A2RU30 521 aaPredicted RBP18.49■□□□□ 0.55
POLR2A-208ENST00000576952 MX1P20591 662 aa18.49■□□□□ 0.55
POLR2A-208ENST00000576952 PPATQ06203 517 aa18.49■□□□□ 0.55
POLR2A-208ENST00000576952 PPIL2Q13356 520 aa18.49■□□□□ 0.55
POLR2A-208ENST00000576952 B4GALNT3Q6L9W6 998 aa18.49■□□□□ 0.55
POLR2A-208ENST00000576952 LCORLQ8N3X6 602 aa18.49■□□□□ 0.55
POLR2A-208ENST00000576952 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.49■□□□□ 0.55
POLR2A-208ENST00000576952 PI4KBQ9UBF8 816 aa18.49■□□□□ 0.55
POLR2A-208ENST00000576952 CCL15-CCL14A0A0B4J2E2 113 aa18.48■□□□□ 0.55
POLR2A-208ENST00000576952 GTF2A2P52657 109 aa18.48■□□□□ 0.55
POLR2A-208ENST00000576952 RRP1BQ14684 758 aaKnown RBP18.48■□□□□ 0.55
POLR2A-208ENST00000576952 CCL15Q16663 113 aa18.48■□□□□ 0.55
POLR2A-208ENST00000576952 SCYL3Q8IZE3 742 aa18.48■□□□□ 0.55
POLR2A-208ENST00000576952 KBTBD3Q8NAB2 608 aa18.48■□□□□ 0.55
POLR2A-208ENST00000576952 BRI3BPQ8WY22 251 aa18.48■□□□□ 0.55
POLR2A-208ENST00000576952 R3HDMLQ9H3Y0 253 aa18.48■□□□□ 0.55
POLR2A-208ENST00000576952 ARMT1Q9H993 441 aa18.48■□□□□ 0.55
POLR2A-208ENST00000576952 ERC2O15083 957 aa18.47■□□□□ 0.55
POLR2A-208ENST00000576952 CTNND1O60716 968 aaKnown RBP18.47■□□□□ 0.55
POLR2A-208ENST00000576952 GLRX3O76003 335 aaKnown RBP18.47■□□□□ 0.55
POLR2A-208ENST00000576952 MBD4O95243 580 aa18.47■□□□□ 0.55
POLR2A-208ENST00000576952 UBE3CQ15386 1083 aa18.47■□□□□ 0.55
POLR2A-208ENST00000576952 TNS4Q8IZW8 715 aa18.47■□□□□ 0.55
POLR2A-208ENST00000576952 SDR42E1Q8WUS8 393 aa18.47■□□□□ 0.55
POLR2A-208ENST00000576952 CRNKL1Q9BZJ0 848 aaKnown RBP18.47■□□□□ 0.55
POLR2A-208ENST00000576952 LNPKQ9C0E8 428 aa18.47■□□□□ 0.55
POLR2A-208ENST00000576952 DNAJC18Q9H819 358 aa18.47■□□□□ 0.55
POLR2A-208ENST00000576952 HERC5Q9UII4 1024 aaKnown RBP18.47■□□□□ 0.55
POLR2A-208ENST00000576952 ALDH1A1P00352 501 aa18.46■□□□□ 0.55
POLR2A-208ENST00000576952 PTPRAP18433 802 aa18.46■□□□□ 0.55
POLR2A-208ENST00000576952 SNAPC2Q13487 334 aa18.46■□□□□ 0.55
POLR2A-208ENST00000576952 ZSCAN25Q6NSZ9 544 aa18.46■□□□□ 0.55
POLR2A-208ENST00000576952 CCDC84Q86UT8 332 aaPredicted RBP18.46■□□□□ 0.55
POLR2A-208ENST00000576952 PICK1Q9NRD5 415 aa18.46■□□□□ 0.55
POLR2A-208ENST00000576952 LOC285556D6RIA3 1793 aa18.45■□□□□ 0.54
POLR2A-208ENST00000576952 PRKAB2O43741 272 aa18.45■□□□□ 0.54
POLR2A-208ENST00000576952 HLA-DOAP06340 250 aa18.45■□□□□ 0.54
POLR2A-208ENST00000576952 CETPP11597 493 aa18.45■□□□□ 0.54
POLR2A-208ENST00000576952 METTL16Q86W50 562 aaKnown RBP18.45■□□□□ 0.54
POLR2A-208ENST00000576952 FOXP4Q8IVH2 680 aaPredicted RBP18.45■□□□□ 0.54
POLR2A-208ENST00000576952 FAM43AQ8N2R8 423 aa18.45■□□□□ 0.54
POLR2A-208ENST00000576952 CRACR2BQ8N4Y2 399 aaPredicted RBP18.45■□□□□ 0.54
POLR2A-208ENST00000576952 PUS7LQ9H0K6 701 aaKnown RBP18.45■□□□□ 0.54
POLR2A-208ENST00000576952 ZHX2Q9Y6X8 837 aa18.45■□□□□ 0.54
POLR2A-208ENST00000576952 ZSWIM8A7E2V4 1837 aa18.44■□□□□ 0.54
POLR2A-208ENST00000576952 CAP2P40123 477 aa18.44■□□□□ 0.54
POLR2A-208ENST00000576952 PDE1AP54750 535 aa18.44■□□□□ 0.54
POLR2A-208ENST00000576952 OTUD7BQ6GQQ9 843 aa18.44■□□□□ 0.54
POLR2A-208ENST00000576952 CFHR5Q9BXR6 569 aa18.44■□□□□ 0.54
POLR2A-208ENST00000576952 TRIM34Q9BYJ4 488 aa18.44■□□□□ 0.54
POLR2A-208ENST00000576952 STAP2Q9UGK3 403 aa18.44■□□□□ 0.54
POLR2A-208ENST00000576952 KCNH4Q9UQ05 1017 aa18.44■□□□□ 0.54
POLR2A-208ENST00000576952 MGAMO43451 1857 aa18.43■□□□□ 0.54
POLR2A-208ENST00000576952 BTBD19C9JJ37 291 aa18.43■□□□□ 0.54
POLR2A-208ENST00000576952 GPR25O00155 361 aa18.43■□□□□ 0.54
POLR2A-208ENST00000576952 RNF113AO15541 343 aaKnown RBP18.43■□□□□ 0.54
POLR2A-208ENST00000576952 PLCD1P51178 756 aa18.43■□□□□ 0.54
POLR2A-208ENST00000576952 EVX2Q03828 476 aa18.43■□□□□ 0.54
POLR2A-208ENST00000576952 CRHR2Q13324 411 aa18.43■□□□□ 0.54
POLR2A-208ENST00000576952 SHROOM1Q2M3G4 852 aaPredicted RBP18.43■□□□□ 0.54
POLR2A-208ENST00000576952 CHD1LQ86WJ1 897 aa18.43■□□□□ 0.54
POLR2A-208ENST00000576952 DCP1AQ9NPI6 582 aaPredicted RBP18.43■□□□□ 0.54
POLR2A-208ENST00000576952 MCM9Q9NXL9 1143 aa18.43■□□□□ 0.54
POLR2A-208ENST00000576952 AFG3L2Q9Y4W6 797 aa18.43■□□□□ 0.54
POLR2A-208ENST00000576952 POLR3DP05423 398 aaPredicted RBP18.42■□□□□ 0.54
POLR2A-208ENST00000576952 JAG1P78504 1218 aa18.42■□□□□ 0.54
POLR2A-208ENST00000576952 NUCB1Q02818 461 aa18.42■□□□□ 0.54
POLR2A-208ENST00000576952 MOGSQ13724 837 aa18.42■□□□□ 0.54
POLR2A-208ENST00000576952 TTC6Q86TZ1 520 aa18.42■□□□□ 0.54
POLR2A-208ENST00000576952 ZNF296Q8WUU4 475 aaPredicted RBP18.42■□□□□ 0.54
POLR2A-208ENST00000576952 CXCL11O14625 94 aa18.41■□□□□ 0.54
POLR2A-208ENST00000576952 GDF11O95390 407 aa18.41■□□□□ 0.54
POLR2A-208ENST00000576952 CYP2D6P10635 497 aa18.41■□□□□ 0.54
POLR2A-208ENST00000576952 TAF1CQ15572 869 aaPredicted RBP18.41■□□□□ 0.54
POLR2A-208ENST00000576952 APPBP2Q92624 585 aa18.41■□□□□ 0.54
POLR2A-208ENST00000576952 OSBP2Q969R2 916 aa18.41■□□□□ 0.54
POLR2A-208ENST00000576952 FSD1Q9BTV5 496 aa18.41■□□□□ 0.54
POLR2A-208ENST00000576952 EHD4Q9H223 541 aa18.41■□□□□ 0.54
POLR2A-208ENST00000576952 SERPINB13Q9UIV8 391 aa18.41■□□□□ 0.54
POLR2A-208ENST00000576952 SLC4A4Q9Y6R1 1079 aa18.41■□□□□ 0.54
POLR2A-208ENST00000576952 TRIM75PA6NK02 468 aa18.4■□□□□ 0.54
POLR2A-208ENST00000576952 ZFYP08048 801 aaPredicted RBP18.4■□□□□ 0.54
POLR2A-208ENST00000576952 A0A0G2JLL6 359 aaPredicted RBP18.39■□□□□ 0.53
POLR2A-208ENST00000576952 M0R2C6 588 aa18.39■□□□□ 0.53
POLR2A-208ENST00000576952 NOM1Q5C9Z4 860 aaKnown RBP18.39■□□□□ 0.53
POLR2A-208ENST00000576952 PRRT2Q7Z6L0 340 aaPredicted RBP18.39■□□□□ 0.53
POLR2A-208ENST00000576952 PLEKHM2Q8IWE5 1019 aa18.39■□□□□ 0.53
POLR2A-208ENST00000576952 STRBPQ96SI9 672 aaKnown RBP18.39■□□□□ 0.53
POLR2A-208ENST00000576952 SEC62Q99442 399 aaKnown RBP18.39■□□□□ 0.53
POLR2A-208ENST00000576952 ATP8A2Q9NTI2 1148 aa18.39■□□□□ 0.53
POLR2A-208ENST00000576952 DOCK3Q8IZD9 2030 aa18.39■□□□□ 0.53
POLR2A-208ENST00000576952 CYP2D7A0A087X1C5 515 aa18.38■□□□□ 0.53
POLR2A-208ENST00000576952 USP17L5A8MUK1 530 aa18.38■□□□□ 0.53
POLR2A-208ENST00000576952 SMIM22K7EJ46 135 aa18.38■□□□□ 0.53
POLR2A-208ENST00000576952 FKTNO75072 461 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms