RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 CETPP11597 493 aa28.38■■■□□ 2.13
SNF8-217ENST00000576353 CCL15Q16663 113 aa28.38■■■□□ 2.13
SNF8-217ENST00000576353 KBTBD3Q8NAB2 608 aa28.38■■■□□ 2.13
SNF8-217ENST00000576353 CFHR5Q9BXR6 569 aa28.38■■■□□ 2.13
SNF8-217ENST00000576353 TRIM34Q9BYJ4 488 aa28.38■■■□□ 2.13
SNF8-217ENST00000576353 SAP30BPQ9UHR5 308 aaKnown RBP28.38■■■□□ 2.13
SNF8-217ENST00000576353 TBC1D8O95759 1140 aa28.37■■■□□ 2.13
SNF8-217ENST00000576353 IGHDP01880 384 aa28.37■■■□□ 2.13
SNF8-217ENST00000576353 TNS4Q8IZW8 715 aa28.37■■■□□ 2.13
SNF8-217ENST00000576353 PI4K2BQ8TCG2 481 aa28.37■■■□□ 2.13
SNF8-217ENST00000576353 FAM196BA6NMK8 535 aa28.36■■■□□ 2.13
SNF8-217ENST00000576353 LRRFIP1Q32MZ4 808 aaKnown RBP28.36■■■□□ 2.13
SNF8-217ENST00000576353 CRACR2BQ8N4Y2 399 aaPredicted RBP28.36■■■□□ 2.13
SNF8-217ENST00000576353 BRI3BPQ8WY22 251 aa28.36■■■□□ 2.13
SNF8-217ENST00000576353 PTPN18Q99952 460 aa28.36■■■□□ 2.13
SNF8-217ENST00000576353 PTPRAP18433 802 aa28.35■■■□□ 2.13
SNF8-217ENST00000576353 IRX6P78412 446 aaPredicted RBP28.35■■■□□ 2.13
SNF8-217ENST00000576353 TTC6Q86TZ1 520 aa28.35■■■□□ 2.13
SNF8-217ENST00000576353 METTL16Q86W50 562 aaKnown RBP28.35■■■□□ 2.13
SNF8-217ENST00000576353 LCORLQ8N3X6 602 aa28.35■■■□□ 2.13
SNF8-217ENST00000576353 NOM1Q5C9Z4 860 aaKnown RBP28.34■■■□□ 2.13
SNF8-217ENST00000576353 ARMT1Q9H993 441 aa28.34■■■□□ 2.13
SNF8-217ENST00000576353 STAP2Q9UGK3 403 aa28.34■■■□□ 2.13
SNF8-217ENST00000576353 KCNH4Q9UQ05 1017 aa28.34■■■□□ 2.13
SNF8-217ENST00000576353 ZHX2Q9Y6X8 837 aa28.34■■■□□ 2.13
SNF8-217ENST00000576353 SALL3Q9BXA9 1300 aa28.34■■■□□ 2.13
SNF8-217ENST00000576353 CXCL11O14625 94 aa28.33■■■□□ 2.13
SNF8-217ENST00000576353 MBD4O95243 580 aa28.33■■■□□ 2.13
SNF8-217ENST00000576353 ZFYP08048 801 aaPredicted RBP28.33■■■□□ 2.13
SNF8-217ENST00000576353 CAP2P40123 477 aa28.33■■■□□ 2.13
SNF8-217ENST00000576353 SLFNL1Q499Z3 407 aa28.33■■■□□ 2.13
SNF8-217ENST00000576353 B4GALNT3Q6L9W6 998 aa28.33■■■□□ 2.13
SNF8-217ENST00000576353 LNPKQ9C0E8 428 aa28.32■■■□□ 2.12
SNF8-217ENST00000576353 GPR25O00155 361 aa28.31■■■□□ 2.12
SNF8-217ENST00000576353 RNF113AO15541 343 aaKnown RBP28.31■■■□□ 2.12
SNF8-217ENST00000576353 PDE1AP54750 535 aa28.31■■■□□ 2.12
SNF8-217ENST00000576353 CHD1LQ86WJ1 897 aa28.31■■■□□ 2.12
SNF8-217ENST00000576353 EHD4Q9H223 541 aa28.31■■■□□ 2.12
SNF8-217ENST00000576353 ZCCHC17Q9NP64 241 aaKnown RBP28.31■■■□□ 2.12
SNF8-217ENST00000576353 ATP8A2Q9NTI2 1148 aa28.31■■■□□ 2.12
SNF8-217ENST00000576353 SERPINB13Q9UIV8 391 aa28.31■■■□□ 2.12
SNF8-217ENST00000576353 CHGBP05060 677 aa28.3■■■□□ 2.12
SNF8-217ENST00000576353 POLR3DP05423 398 aaPredicted RBP28.3■■■□□ 2.12
SNF8-217ENST00000576353 NUCB1Q02818 461 aa28.3■■■□□ 2.12
SNF8-217ENST00000576353 SLC4A8Q2Y0W8 1093 aa28.3■■■□□ 2.12
SNF8-217ENST00000576353 MCM9Q9NXL9 1143 aa28.3■■■□□ 2.12
SNF8-217ENST00000576353 FAM43AQ8N2R8 423 aa28.29■■■□□ 2.12
SNF8-217ENST00000576353 SDR42E1Q8WUS8 393 aa28.29■■■□□ 2.12
SNF8-217ENST00000576353 APPBP2Q92624 585 aa28.29■■■□□ 2.12
SNF8-217ENST00000576353 DDRGK1Q96HY6 314 aa28.29■■■□□ 2.12
SNF8-217ENST00000576353 TBC1D2Q9BYX2 928 aa28.29■■■□□ 2.12
SNF8-217ENST00000576353 PUS7LQ9H0K6 701 aaKnown RBP28.29■■■□□ 2.12
SNF8-217ENST00000576353 DNAJC18Q9H819 358 aa28.29■■■□□ 2.12
SNF8-217ENST00000576353 DCP1AQ9NPI6 582 aaPredicted RBP28.29■■■□□ 2.12
SNF8-217ENST00000576353 AFG3L2Q9Y4W6 797 aa28.29■■■□□ 2.12
SNF8-217ENST00000576353 LAMB1P07942 1786 aa28.29■■■□□ 2.12
SNF8-217ENST00000576353 CRHR2Q13324 411 aa28.28■■■□□ 2.12
SNF8-217ENST00000576353 RRP1BQ14684 758 aaKnown RBP28.28■■■□□ 2.12
SNF8-217ENST00000576353 ZNF296Q8WUU4 475 aaPredicted RBP28.28■■■□□ 2.12
SNF8-217ENST00000576353 FSD1Q9BTV5 496 aa28.28■■■□□ 2.12
SNF8-217ENST00000576353 R3HDMLQ9H3Y0 253 aa28.28■■■□□ 2.12
SNF8-217ENST00000576353 GINM1Q9NU53 330 aa28.28■■■□□ 2.12
SNF8-217ENST00000576353 FOCADQ5VW36 1801 aa28.27■■■□□ 2.12
SNF8-217ENST00000576353 BTBD19C9JJ37 291 aa28.27■■■□□ 2.12
SNF8-217ENST00000576353 PRKAB2O43741 272 aa28.27■■■□□ 2.12
SNF8-217ENST00000576353 ASNSP08243 561 aa28.27■■■□□ 2.12
SNF8-217ENST00000576353 TAF1CQ15572 869 aaPredicted RBP28.27■■■□□ 2.12
SNF8-217ENST00000576353 ZFYVE28Q9HCC9 887 aa28.27■■■□□ 2.12
SNF8-217ENST00000576353 CDK5RAP2Q96SN8 1893 aa28.26■■■□□ 2.11
SNF8-217ENST00000576353 USP17L5A8MUK1 530 aa28.26■■■□□ 2.11
SNF8-217ENST00000576353 PLCD1P51178 756 aa28.26■■■□□ 2.11
SNF8-217ENST00000576353 FASTKD5Q7L8L6 764 aaKnown RBP28.26■■■□□ 2.11
SNF8-217ENST00000576353 ANKRD23Q86SG2 305 aa28.26■■■□□ 2.11
SNF8-217ENST00000576353 SLC4A4Q9Y6R1 1079 aa28.26■■■□□ 2.11
SNF8-217ENST00000576353 A0A0G2JLL6 359 aaPredicted RBP28.25■■■□□ 2.11
SNF8-217ENST00000576353 FKTNO75072 461 aa28.25■■■□□ 2.11
SNF8-217ENST00000576353 TATDN1Q6P1N9 297 aa28.25■■■□□ 2.11
SNF8-217ENST00000576353 PRRT2Q7Z6L0 340 aaPredicted RBP28.25■■■□□ 2.11
SNF8-217ENST00000576353 AMOTL1Q8IY63 956 aa28.25■■■□□ 2.11
SNF8-217ENST00000576353 OSBP2Q969R2 916 aa28.25■■■□□ 2.11
SNF8-217ENST00000576353 EVI5LQ96CN4 794 aa28.25■■■□□ 2.11
SNF8-217ENST00000576353 STRBPQ96SI9 672 aaKnown RBP28.25■■■□□ 2.11
SNF8-217ENST00000576353 AS3MTQ9HBK9 375 aa28.25■■■□□ 2.11
SNF8-217ENST00000576353 TAOK2Q9UL54 1235 aa28.25■■■□□ 2.11
SNF8-217ENST00000576353 TRIM75PA6NK02 468 aa28.24■■■□□ 2.11
SNF8-217ENST00000576353 ZNF280CQ8ND82 737 aa28.24■■■□□ 2.11
SNF8-217ENST00000576353 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.24■■■□□ 2.11
SNF8-217ENST00000576353 MOGSQ13724 837 aa28.23■■■□□ 2.11
SNF8-217ENST00000576353 CCDC84Q86UT8 332 aaPredicted RBP28.23■■■□□ 2.11
SNF8-217ENST00000576353 PDHXO00330 501 aa28.22■■■□□ 2.11
SNF8-217ENST00000576353 SPP2Q13103 211 aa28.22■■■□□ 2.11
SNF8-217ENST00000576353 CASP8AP2Q9UKL3 1982 aa28.22■■■□□ 2.11
SNF8-217ENST00000576353 DOCK1Q14185 1865 aa28.21■■■□□ 2.11
SNF8-217ENST00000576353 GDF11O95390 407 aa28.21■■■□□ 2.11
SNF8-217ENST00000576353 GNAT2P19087 354 aa28.21■■■□□ 2.11
SNF8-217ENST00000576353 GABPAQ06546 454 aa28.21■■■□□ 2.11
SNF8-217ENST00000576353 DGKZQ13574 1117 aa28.21■■■□□ 2.11
SNF8-217ENST00000576353 PLEKHM2Q8IWE5 1019 aa28.21■■■□□ 2.11
SNF8-217ENST00000576353 WDR18Q9BV38 432 aa28.21■■■□□ 2.11
SNF8-217ENST00000576353 ZBTB21Q9ULJ3 1066 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms