RNA–Protein interactions for RNA: ENST00000575069.5

P4HB-220, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

TSL 2

Gene P4HB, Length 2,453 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-220ENST00000575069 UPF1Q92900 1129 aaKnown RBP eCLIP17.61■□□□□ 0.415e-51■■■■■ 69.8
P4HB-220ENST00000575069 DYNLL2Q96FJ2 89 aa17.61■□□□□ 0.41
P4HB-220ENST00000575069 UBAC1Q9BSL1 405 aa17.61■□□□□ 0.41
P4HB-220ENST00000575069 ERICH2A1L162 156 aa17.6■□□□□ 0.41
P4HB-220ENST00000575069 CCDC69A6NI79 296 aa17.6■□□□□ 0.41
P4HB-220ENST00000575069 ZBTB43O43298 467 aa17.6■□□□□ 0.41
P4HB-220ENST00000575069 PPIP5K2O43314 1243 aa17.6■□□□□ 0.41
P4HB-220ENST00000575069 ORC4O43929 436 aa17.6■□□□□ 0.41
P4HB-220ENST00000575069 METAP2P50579 478 aaKnown RBP eCLIP17.6■□□□□ 0.411e-7■□□□□ 11
P4HB-220ENST00000575069 SEC23AQ15436 765 aa17.6■□□□□ 0.41
P4HB-220ENST00000575069 CCDC93Q567U6 631 aa17.6■□□□□ 0.41
P4HB-220ENST00000575069 DACT2Q5SW24 774 aa17.6■□□□□ 0.41
P4HB-220ENST00000575069 STRIP1Q5VSL9 837 aa17.6■□□□□ 0.41
P4HB-220ENST00000575069 FERMT3Q86UX7 667 aa17.6■□□□□ 0.41
P4HB-220ENST00000575069 CHMP4CQ96CF2 233 aa17.6■□□□□ 0.41
P4HB-220ENST00000575069 SLC12A7Q9Y666 1083 aa17.6■□□□□ 0.41
P4HB-220ENST00000575069 DHX16O60231 1041 aaKnown RBP17.6■□□□□ 0.41
P4HB-220ENST00000575069 SLC3A2P08195 630 aaKnown RBP17.6■□□□□ 0.41
P4HB-220ENST00000575069 CDC27P30260 824 aa17.6■□□□□ 0.41
P4HB-220ENST00000575069 PLCD1P51178 756 aa17.6■□□□□ 0.41
P4HB-220ENST00000575069 FOSBP53539 338 aa17.6■□□□□ 0.41
P4HB-220ENST00000575069 FAM47AQ5JRC9 791 aa17.6■□□□□ 0.41
P4HB-220ENST00000575069 NAP1L5Q96NT1 182 aaPredicted RBP17.6■□□□□ 0.41
P4HB-220ENST00000575069 MTA3Q9BTC8 594 aa17.6■□□□□ 0.41
P4HB-220ENST00000575069 TNKSO95271 1327 aa17.59■□□□□ 0.41
P4HB-220ENST00000575069 CPLX1O14810 134 aa17.59■□□□□ 0.41
P4HB-220ENST00000575069 PDIA4P13667 645 aaKnown RBP17.59■□□□□ 0.41
P4HB-220ENST00000575069 PDE4BQ07343 736 aa17.59■□□□□ 0.41
P4HB-220ENST00000575069 RTKN2Q8IZC4 609 aa17.59■□□□□ 0.41
P4HB-220ENST00000575069 ZSCAN10Q96SZ4 725 aaPredicted RBP17.59■□□□□ 0.41
P4HB-220ENST00000575069 FAM217BQ9NTX9 383 aaPredicted RBP17.59■□□□□ 0.41
P4HB-220ENST00000575069 NAV1Q8NEY1 1877 aa17.59■□□□□ 0.41
P4HB-220ENST00000575069 FLT1P17948 1338 aa17.59■□□□□ 0.41
P4HB-220ENST00000575069 USP17L3A6NCW0 530 aa17.59■□□□□ 0.41
P4HB-220ENST00000575069 USP17L4A6NCW7 530 aa17.59■□□□□ 0.41
P4HB-220ENST00000575069 POLR3DP05423 398 aaPredicted RBP17.59■□□□□ 0.41
P4HB-220ENST00000575069 USP17L1Q7RTZ2 530 aa17.59■□□□□ 0.41
P4HB-220ENST00000575069 KIAA0825Q8IV33 1275 aa17.59■□□□□ 0.41
P4HB-220ENST00000575069 GDPD2Q9HCC8 539 aa17.59■□□□□ 0.41
P4HB-220ENST00000575069 PPP1R1BQ9UD71 204 aaPredicted RBP17.59■□□□□ 0.41
P4HB-220ENST00000575069 YDJCA8MPS7 323 aa17.58■□□□□ 0.41
P4HB-220ENST00000575069 PTMSP20962 102 aa17.58■□□□□ 0.41
P4HB-220ENST00000575069 TGFB2P61812 414 aa17.58■□□□□ 0.41
P4HB-220ENST00000575069 TMTC2Q8N394 836 aa17.58■□□□□ 0.41
P4HB-220ENST00000575069 ENAHQ8N8S7 591 aaPredicted RBP17.58■□□□□ 0.41
P4HB-220ENST00000575069 PIM2Q9P1W9 311 aa17.58■□□□□ 0.41
P4HB-220ENST00000575069 ADAMTSL1Q8N6G6 1762 aa17.58■□□□□ 0.4
P4HB-220ENST00000575069 PSDA5PKW4 1024 aaPredicted RBP17.58■□□□□ 0.4
P4HB-220ENST00000575069 GOLGA8AA7E2F4 631 aa17.58■□□□□ 0.4
P4HB-220ENST00000575069 NMT2O60551 498 aa17.58■□□□□ 0.4
P4HB-220ENST00000575069 HHIPL2Q6UWX4 724 aa17.58■□□□□ 0.4
P4HB-220ENST00000575069 H3BQV1 296 aa17.57■□□□□ 0.4
P4HB-220ENST00000575069 GRIPAP1Q4V328 841 aa17.57■□□□□ 0.4
P4HB-220ENST00000575069 IFFO2Q5TF58 517 aa17.57■□□□□ 0.4
P4HB-220ENST00000575069 SYNE3Q6ZMZ3 975 aa17.57■□□□□ 0.4
P4HB-220ENST00000575069 AMOTL1Q8IY63 956 aa17.57■□□□□ 0.4
P4HB-220ENST00000575069 TEKT1Q969V4 418 aa17.57■□□□□ 0.4
P4HB-220ENST00000575069 PSMD1Q99460 953 aa17.57■□□□□ 0.4
P4HB-220ENST00000575069 ZNF277Q9NRM2 450 aaPredicted RBP17.57■□□□□ 0.4
P4HB-220ENST00000575069 USP40Q9NVE5 1235 aa17.57■□□□□ 0.4
P4HB-220ENST00000575069 CNPY2Q9Y2B0 182 aa17.57■□□□□ 0.4
P4HB-220ENST00000575069 PCDHAC2Q9Y5I4 1007 aa17.57■□□□□ 0.4
P4HB-220ENST00000575069 MYH1P12882 1939 aa17.57■□□□□ 0.4
P4HB-220ENST00000575069 ZNF646O15015 1829 aaPredicted RBP17.57■□□□□ 0.4
P4HB-220ENST00000575069 CRKP46108 304 aa17.57■□□□□ 0.4
P4HB-220ENST00000575069 FKBP1AP62942 108 aaKnown RBP17.57■□□□□ 0.4
P4HB-220ENST00000575069 APOBEC3HQ6NTF7 200 aaKnown RBP17.57■□□□□ 0.4
P4HB-220ENST00000575069 FAM173BQ6P4H8 233 aa17.57■□□□□ 0.4
P4HB-220ENST00000575069 IQCA1Q86XH1 822 aa17.57■□□□□ 0.4
P4HB-220ENST00000575069 SLC44A5Q8NCS7 719 aa17.57■□□□□ 0.4
P4HB-220ENST00000575069 ORC3Q9UBD5 711 aaPredicted RBP17.57■□□□□ 0.4
P4HB-220ENST00000575069 ATP6V1DQ9Y5K8 247 aa17.57■□□□□ 0.4
P4HB-220ENST00000575069 DNM1Q05193 864 aaKnown RBP17.56■□□□□ 0.4
P4HB-220ENST00000575069 SKOR2Q2VWA4 1001 aaPredicted RBP17.56■□□□□ 0.4
P4HB-220ENST00000575069 ZNF654Q8IZM8 581 aa17.56■□□□□ 0.4
P4HB-220ENST00000575069 PICALMQ13492 652 aa17.56■□□□□ 0.4
P4HB-220ENST00000575069 NTRK3Q16288 839 aa17.56■□□□□ 0.4
P4HB-220ENST00000575069 CDC42EP5Q6NZY7 148 aa17.56■□□□□ 0.4
P4HB-220ENST00000575069 MKNK2Q9HBH9 465 aa17.56■□□□□ 0.4
P4HB-220ENST00000575069 DDX4Q9NQI0 724 aaKnown RBP17.56■□□□□ 0.4
P4HB-220ENST00000575069 KIF3AQ9Y496 699 aa17.56■□□□□ 0.4
P4HB-220ENST00000575069 DDX49Q9Y6V7 483 aaKnown RBP17.56■□□□□ 0.4
P4HB-220ENST00000575069 TSPY2A6NKD2 308 aa17.55■□□□□ 0.4
P4HB-220ENST00000575069 WDHD1O75717 1129 aaPredicted RBP17.55■□□□□ 0.4
P4HB-220ENST00000575069 TFAP4Q01664 338 aa17.55■□□□□ 0.4
P4HB-220ENST00000575069 GUCY1B3Q02153 619 aa17.55■□□□□ 0.4
P4HB-220ENST00000575069 USP48Q86UV5 1035 aa17.55■□□□□ 0.4
P4HB-220ENST00000575069 KLHL34Q8N239 644 aa17.55■□□□□ 0.4
P4HB-220ENST00000575069 PHKBQ93100 1093 aa17.55■□□□□ 0.4
P4HB-220ENST00000575069 SGIP1Q9BQI5 828 aa17.55■□□□□ 0.4
P4HB-220ENST00000575069 ROBO3Q96MS0 1386 aa17.55■□□□□ 0.4
P4HB-220ENST00000575069 FOCADQ5VW36 1801 aa17.55■□□□□ 0.4
P4HB-220ENST00000575069 IFIT1BQ5T764 474 aaKnown RBP17.55■□□□□ 0.4
P4HB-220ENST00000575069 NUP133Q8WUM0 1156 aa17.55■□□□□ 0.4
P4HB-220ENST00000575069 NCLP19338 710 aaKnown RBP17.54■□□□□ 0.4
P4HB-220ENST00000575069 OTUD7BQ6GQQ9 843 aa17.54■□□□□ 0.4
P4HB-220ENST00000575069 LARGE2Q8N3Y3 721 aa17.54■□□□□ 0.4
P4HB-220ENST00000575069 DALRD3Q5D0E6 543 aaKnown RBP17.54■□□□□ 0.4
P4HB-220ENST00000575069 FANCBQ8NB91 859 aa17.54■□□□□ 0.4
P4HB-220ENST00000575069 ZDHHC15Q96MV8 337 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms