RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 SH2B1Q9NRF2 756 aaPredicted RBP8.69□□□□□ -1.02
RPA1-207ENST00000574049 HOOK1Q9UJC3 728 aaKnown RBP8.69□□□□□ -1.02
RPA1-207ENST00000574049 XDHP47989 1333 aa8.69□□□□□ -1.02
RPA1-207ENST00000574049 CYP2D7A0A087X1C5 515 aa8.69□□□□□ -1.02
RPA1-207ENST00000574049 BBOX1O75936 387 aa8.69□□□□□ -1.02
RPA1-207ENST00000574049 GTF2F1P35269 517 aaKnown RBP eCLIP8.69□□□□□ -1.02
RPA1-207ENST00000574049 CEP57L1Q8IYX8 460 aa8.69□□□□□ -1.02
RPA1-207ENST00000574049 PLIN2Q99541 437 aa8.69□□□□□ -1.02
RPA1-207ENST00000574049 BRIP1Q9BX63 1249 aa8.69□□□□□ -1.02
RPA1-207ENST00000574049 SRRTQ9BXP5 876 aaKnown RBP8.69□□□□□ -1.02
RPA1-207ENST00000574049 SCAND2PQ9GZW5 306 aaPredicted RBP8.69□□□□□ -1.02
RPA1-207ENST00000574049 F13A1P00488 732 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 FGAP02671 866 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 LMOD1P29536 600 aaPredicted RBP8.68□□□□□ -1.02
RPA1-207ENST00000574049 HSPA4P34932 840 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 IARSP41252 1262 aaKnown RBP8.68□□□□□ -1.02
RPA1-207ENST00000574049 AFMP43652 599 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 SLC10A5Q5PT55 438 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 FKBP15Q5T1M5 1219 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 ANKRD20A12PQ8NF67 263 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 SNX21Q969T3 373 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 TCEAL9Q9UHQ7 104 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 CTDP1Q9Y5B0 961 aaPredicted RBP8.68□□□□□ -1.02
RPA1-207ENST00000574049 COL22A1Q8NFW1 1626 aaPredicted RBP8.68□□□□□ -1.02
RPA1-207ENST00000574049 CACNA1FO60840 1977 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 PPIP5K2O43314 1243 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 LRMPQ12912 555 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 MCM9Q9NXL9 1143 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 A0A1B0GVL5 298 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 CYP21A2P08686 494 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 NPR1P16066 1061 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 ERCC3P19447 782 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 TM4SF1P30408 202 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 METAP2P50579 478 aaKnown RBP eCLIP8.68□□□□□ -1.029e-6■■■■□ 23.9
RPA1-207ENST00000574049 ZMYM1Q5SVZ6 1142 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 LARGE2Q8N3Y3 721 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 GPT2Q8TD30 523 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 CAMKK2Q96RR4 588 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 HELLSQ9NRZ9 838 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 LMBRD1Q9NUN5 540 aa8.68□□□□□ -1.02
RPA1-207ENST00000574049 MYH14Q7Z406 1995 aaKnown RBP8.68□□□□□ -1.02
RPA1-207ENST00000574049 TOGARAM1Q9Y4F4 1720 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 ITGB4P16144 1822 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 FSD2A1L4K1 749 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 B4E1Z4 1266 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 PRC1O43663 620 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 LETM1O95202 739 aaPredicted RBP8.67□□□□□ -1.02
RPA1-207ENST00000574049 LCORLQ8N3X6 602 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 MASTLQ96GX5 879 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 TANGO6Q9C0B7 1094 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 PRDM16Q9HAZ2 1276 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 GPHNQ9NQX3 736 aaPredicted RBP8.67□□□□□ -1.02
RPA1-207ENST00000574049 TSPY2A6NKD2 308 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 RAD17O75943 681 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 KRT18P05783 430 aaKnown RBP8.67□□□□□ -1.02
RPA1-207ENST00000574049 ADD2P35612 726 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 TMC6Q7Z403 805 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 MAPKAPK5Q8IW41 473 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 JMYQ8N9B5 988 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 AKT1S1Q96B36 256 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 POM121Q96HA1 1249 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 ATP2B4P23634 1241 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 UBE2HP62256 183 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 TCP10Q12799 353 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 GPS2Q13227 327 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 MAP4K1Q92918 833 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 PHKBQ93100 1093 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 CDK5RAP3Q96JB5 506 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 KIF2CQ99661 725 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 POLLQ9UGP5 575 aa8.67□□□□□ -1.02
RPA1-207ENST00000574049 MFSD6Q6ZSS7 791 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 VGLL2Q8N8G2 317 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 CNNM3Q8NE01 707 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 TGFBRAP1Q8WUH2 860 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 CD209Q9NNX6 404 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 TTF2Q9UNY4 1162 aaKnown RBP8.66□□□□□ -1.02
RPA1-207ENST00000574049 DPEP1P16444 411 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 MECOMQ03112 1051 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 PTPN14Q15678 1187 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 AOC3Q16853 763 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 GOLGA6L1Q8N7Z2 621 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 GPATCH11Q8N954 259 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 NCOA7Q8NI08 942 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 TBC1D16Q8TBP0 767 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 CCDC43Q96MW1 224 aaKnown RBP8.66□□□□□ -1.02
RPA1-207ENST00000574049 HINFPQ9BQA5 517 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 ALG1Q9BT22 464 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 ZNF277Q9NRM2 450 aaPredicted RBP8.66□□□□□ -1.02
RPA1-207ENST00000574049 LEMD3Q9Y2U8 911 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 GJA3Q9Y6H8 435 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 PTPDC1A2A3K4 754 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 SLC3A2P08195 630 aaKnown RBP8.66□□□□□ -1.02
RPA1-207ENST00000574049 SRGNP10124 158 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 CACNB3P54284 484 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 STX17P56962 302 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 COL9A3Q14050 684 aaPredicted RBP8.66□□□□□ -1.02
RPA1-207ENST00000574049 TAF3Q5VWG9 929 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 CDC37L1Q7L3B6 337 aa8.66□□□□□ -1.02
RPA1-207ENST00000574049 NOL7Q9UMY1 257 aaKnown RBP8.66□□□□□ -1.02
RPA1-207ENST00000574049 SCAF8Q9UPN6 1271 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms