RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 SLC10A4Q96EP9 437 aa13.26□□□□□ -0.29
CHD3-216ENST00000573936 DDRGK1Q96HY6 314 aa13.26□□□□□ -0.29
CHD3-216ENST00000573936 ATP8A2Q9NTI2 1148 aa13.26□□□□□ -0.29
CHD3-216ENST00000573936 PI4KBQ9UBF8 816 aa13.26□□□□□ -0.29
CHD3-216ENST00000573936 MYO5AQ9Y4I1 1855 aaKnown RBP13.26□□□□□ -0.29
CHD3-216ENST00000573936 GNAT2P19087 354 aa13.25□□□□□ -0.29
CHD3-216ENST00000573936 MIGA2Q7L4E1 593 aa13.25□□□□□ -0.29
CHD3-216ENST00000573936 SH3BP5LQ7L8J4 393 aa13.25□□□□□ -0.29
CHD3-216ENST00000573936 TTC6Q86TZ1 520 aa13.25□□□□□ -0.29
CHD3-216ENST00000573936 FOXP4Q8IVH2 680 aaPredicted RBP13.25□□□□□ -0.29
CHD3-216ENST00000573936 LCORLQ8N3X6 602 aa13.25□□□□□ -0.29
CHD3-216ENST00000573936 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.25□□□□□ -0.292e-6■□□□□ 9.8
CHD3-216ENST00000573936 OSBP2Q969R2 916 aa13.25□□□□□ -0.29
CHD3-216ENST00000573936 PUS7LQ9H0K6 701 aaKnown RBP13.25□□□□□ -0.29
CHD3-216ENST00000573936 ARMT1Q9H993 441 aa13.25□□□□□ -0.29
CHD3-216ENST00000573936 HERC5Q9UII4 1024 aaKnown RBP13.25□□□□□ -0.29
CHD3-216ENST00000573936 ZNF112Q9UJU3 913 aa13.25□□□□□ -0.29
CHD3-216ENST00000573936 FZD1Q9UP38 647 aa13.25□□□□□ -0.29
CHD3-216ENST00000573936 CSADQ9Y600 493 aa13.25□□□□□ -0.29
CHD3-216ENST00000573936 HIP1O00291 1037 aa13.24□□□□□ -0.29
CHD3-216ENST00000573936 SREBF2Q12772 1141 aa13.24□□□□□ -0.29
CHD3-216ENST00000573936 SLFNL1Q499Z3 407 aa13.24□□□□□ -0.29
CHD3-216ENST00000573936 ZMYM1Q5SVZ6 1142 aa13.24□□□□□ -0.29
CHD3-216ENST00000573936 TTC22Q5TAA0 569 aa13.24□□□□□ -0.29
CHD3-216ENST00000573936 AMOTL1Q8IY63 956 aa13.24□□□□□ -0.29
CHD3-216ENST00000573936 WRNIP1Q96S55 665 aa13.24□□□□□ -0.29
CHD3-216ENST00000573936 TRIM34Q9BYJ4 488 aa13.24□□□□□ -0.29
CHD3-216ENST00000573936 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.24□□□□□ -0.29
CHD3-216ENST00000573936 HELLSQ9NRZ9 838 aa13.24□□□□□ -0.29
CHD3-216ENST00000573936 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.24□□□□□ -0.29
CHD3-216ENST00000573936 SLC4A4Q9Y6R1 1079 aa13.24□□□□□ -0.29
CHD3-216ENST00000573936 MKI67P46013 3256 aaKnown RBP13.23□□□□□ -0.29
CHD3-216ENST00000573936 GPR25O00155 361 aa13.23□□□□□ -0.29
CHD3-216ENST00000573936 CHGBP05060 677 aa13.23□□□□□ -0.29
CHD3-216ENST00000573936 POLR3DP05423 398 aaPredicted RBP13.23□□□□□ -0.29
CHD3-216ENST00000573936 TM4SF4P48230 202 aa13.23□□□□□ -0.29
CHD3-216ENST00000573936 GIMAP6Q6P9H5 292 aa13.23□□□□□ -0.29
CHD3-216ENST00000573936 FBXO46Q6PJ61 603 aaPredicted RBP13.23□□□□□ -0.29
CHD3-216ENST00000573936 CRACR2BQ8N4Y2 399 aaPredicted RBP13.23□□□□□ -0.29
CHD3-216ENST00000573936 STRBPQ96SI9 672 aaKnown RBP13.23□□□□□ -0.29
CHD3-216ENST00000573936 DCP1AQ9NPI6 582 aaPredicted RBP13.23□□□□□ -0.29
CHD3-216ENST00000573936 MCM9Q9NXL9 1143 aa13.23□□□□□ -0.29
CHD3-216ENST00000573936 SAP30BPQ9UHR5 308 aaKnown RBP13.23□□□□□ -0.29
CHD3-216ENST00000573936 TAOK2Q9UL54 1235 aa13.23□□□□□ -0.29
CHD3-216ENST00000573936 PALD1Q9ULE6 856 aa13.23□□□□□ -0.29
CHD3-216ENST00000573936 GPAA1O43292 621 aa13.22□□□□□ -0.29
CHD3-216ENST00000573936 FKTNO75072 461 aa13.22□□□□□ -0.29
CHD3-216ENST00000573936 SDSP20132 328 aa13.22□□□□□ -0.29
CHD3-216ENST00000573936 MCMDC2Q4G0Z9 681 aa13.22□□□□□ -0.29
CHD3-216ENST00000573936 NOL9Q5SY16 702 aaKnown RBP13.22□□□□□ -0.29
CHD3-216ENST00000573936 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.22□□□□□ -0.29
CHD3-216ENST00000573936 METTL16Q86W50 562 aaKnown RBP13.22□□□□□ -0.29
CHD3-216ENST00000573936 SDR42E1Q8WUS8 393 aa13.22□□□□□ -0.29
CHD3-216ENST00000573936 BRCA2P51587 3418 aa13.22□□□□□ -0.29
CHD3-216ENST00000573936 MYH7P12883 1935 aa13.21□□□□□ -0.29
CHD3-216ENST00000573936 PHF20L1A8MW92 1017 aa13.21□□□□□ -0.29
CHD3-216ENST00000573936 PATL2C9JE40 543 aaKnown RBP13.21□□□□□ -0.29
CHD3-216ENST00000573936 M0R2C6 588 aa13.21□□□□□ -0.29
CHD3-216ENST00000573936 PRKAB2O43741 272 aa13.21□□□□□ -0.29
CHD3-216ENST00000573936 CTNND1O60716 968 aaKnown RBP13.21□□□□□ -0.29
CHD3-216ENST00000573936 ZBTB48P10074 688 aaPredicted RBP13.21□□□□□ -0.29
CHD3-216ENST00000573936 MFAP1P55081 439 aaKnown RBP13.21□□□□□ -0.29
CHD3-216ENST00000573936 VGLL4Q14135 290 aa13.21□□□□□ -0.29
CHD3-216ENST00000573936 SPRYD7Q5W111 196 aa13.21□□□□□ -0.29
CHD3-216ENST00000573936 NACAP1Q9BZK3 213 aa13.21□□□□□ -0.29
CHD3-216ENST00000573936 EHD4Q9H223 541 aa13.21□□□□□ -0.29
CHD3-216ENST00000573936 DIAPH3Q9NSV4 1193 aa13.21□□□□□ -0.29
CHD3-216ENST00000573936 OTOFQ9HC10 1997 aa13.21□□□□□ -0.29
CHD3-216ENST00000573936 AK9Q5TCS8 1911 aa13.2□□□□□ -0.3
CHD3-216ENST00000573936 ALDH1A1P00352 501 aa13.2□□□□□ -0.3
CHD3-216ENST00000573936 APPP05067 770 aa13.2□□□□□ -0.3
CHD3-216ENST00000573936 GSPT1P15170 499 aaKnown RBP13.2□□□□□ -0.3
CHD3-216ENST00000573936 INPP5BP32019 993 aa13.2□□□□□ -0.3
CHD3-216ENST00000573936 INHBEP58166 350 aa13.2□□□□□ -0.3
CHD3-216ENST00000573936 NOM1Q5C9Z4 860 aaKnown RBP13.2□□□□□ -0.3
CHD3-216ENST00000573936 ERO1BQ86YB8 467 aa13.2□□□□□ -0.3
CHD3-216ENST00000573936 SCYL3Q8IZE3 742 aa13.2□□□□□ -0.3
CHD3-216ENST00000573936 ZKSCAN4Q969J2 545 aaPredicted RBP13.2□□□□□ -0.3
CHD3-216ENST00000573936 OPTNQ96CV9 577 aa13.2□□□□□ -0.3
CHD3-216ENST00000573936 WNK4Q96J92 1243 aa13.2□□□□□ -0.3
CHD3-216ENST00000573936 CLMNQ96JQ2 1002 aa13.2□□□□□ -0.3
CHD3-216ENST00000573936 ELP3Q9H9T3 547 aa13.2□□□□□ -0.3
CHD3-216ENST00000573936 PICK1Q9NRD5 415 aa13.2□□□□□ -0.3
CHD3-216ENST00000573936 GINM1Q9NU53 330 aa13.2□□□□□ -0.3
CHD3-216ENST00000573936 ARPP21Q9UBL0 812 aaPredicted RBP13.2□□□□□ -0.3
CHD3-216ENST00000573936 SERPINB13Q9UIV8 391 aa13.2□□□□□ -0.3
CHD3-216ENST00000573936 SNCAIPQ9Y6H5 919 aa13.2□□□□□ -0.3
CHD3-216ENST00000573936 FOCADQ5VW36 1801 aa13.19□□□□□ -0.3
CHD3-216ENST00000573936 MANSC4A6NHS7 340 aaPredicted RBP13.19□□□□□ -0.3
CHD3-216ENST00000573936 GSG1L2A8MUP6 293 aa13.19□□□□□ -0.3
CHD3-216ENST00000573936 PPATQ06203 517 aa13.19□□□□□ -0.3
CHD3-216ENST00000573936 SBK1Q52WX2 424 aa13.19□□□□□ -0.3
CHD3-216ENST00000573936 SEC62Q99442 399 aaKnown RBP13.19□□□□□ -0.3
CHD3-216ENST00000573936 TBC1D2Q9BYX2 928 aa13.19□□□□□ -0.3
CHD3-216ENST00000573936 R3HDMLQ9H3Y0 253 aa13.19□□□□□ -0.3
CHD3-216ENST00000573936 LAMB1P07942 1786 aa13.19□□□□□ -0.3
CHD3-216ENST00000573936 SPDYE5A6NIY4 337 aa13.18□□□□□ -0.3
CHD3-216ENST00000573936 USP17L12C9JPN9 530 aa13.18□□□□□ -0.3
CHD3-216ENST00000573936 USP17L21D6R901 530 aa13.18□□□□□ -0.3
CHD3-216ENST00000573936 CAP2P40123 477 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms