RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 BAG3O95817 575 aa21.28■■□□□ 1
SMG6-214ENST00000573827 PLCG2P16885 1265 aa21.28■■□□□ 1
SMG6-214ENST00000573827 DYNLL1P63167 89 aaKnown RBP21.28■■□□□ 1
SMG6-214ENST00000573827 CCDC84Q86UT8 332 aaPredicted RBP21.28■■□□□ 1
SMG6-214ENST00000573827 EFCC1Q9HA90 598 aa21.28■■□□□ 1
SMG6-214ENST00000573827 RAB11FIP3O75154 756 aa21.27■■□□□ 1
SMG6-214ENST00000573827 IDH1O75874 414 aaKnown RBP21.27■■□□□ 1
SMG6-214ENST00000573827 CYP7A1P22680 504 aa21.27■■□□□ 1
SMG6-214ENST00000573827 CTGFP29279 349 aa21.27■■□□□ 1
SMG6-214ENST00000573827 MLLT1Q03111 559 aaPredicted RBP21.27■■□□□ 1
SMG6-214ENST00000573827 MAPKAPK5Q8IW41 473 aa21.27■■□□□ 1
SMG6-214ENST00000573827 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.27■■□□□ 1
SMG6-214ENST00000573827 TGFBRAP1Q8WUH2 860 aa21.27■■□□□ 1
SMG6-214ENST00000573827 ARHGAP39Q9C0H5 1083 aa21.27■■□□□ 1
SMG6-214ENST00000573827 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.27■■□□□ 1
SMG6-214ENST00000573827 PICK1Q9NRD5 415 aa21.27■■□□□ 1
SMG6-214ENST00000573827 APBB1O00213 710 aa21.26■□□□□ 0.99
SMG6-214ENST00000573827 JAG1P78504 1218 aa21.26■□□□□ 0.99
SMG6-214ENST00000573827 CLASRPQ8N2M8 674 aaKnown RBP21.26■□□□□ 0.99
SMG6-214ENST00000573827 MAGEB6Q8N7X4 407 aa21.26■□□□□ 0.99
SMG6-214ENST00000573827 DHX36Q9H2U1 1008 aaKnown RBP21.26■□□□□ 0.99
SMG6-214ENST00000573827 CHMP4BQ9H444 224 aaKnown RBP21.26■□□□□ 0.99
SMG6-214ENST00000573827 PI4KBQ9UBF8 816 aa21.26■□□□□ 0.99
SMG6-214ENST00000573827 HERC5Q9UII4 1024 aaKnown RBP21.26■□□□□ 0.99
SMG6-214ENST00000573827 CAP2P40123 477 aa21.25■□□□□ 0.99
SMG6-214ENST00000573827 LACTBP83111 547 aaPredicted RBP21.25■□□□□ 0.99
SMG6-214ENST00000573827 TMED8Q6PL24 325 aaPredicted RBP21.25■□□□□ 0.99
SMG6-214ENST00000573827 ARMC5Q96C12 935 aa21.25■□□□□ 0.99
SMG6-214ENST00000573827 RIOK1Q9BRS2 568 aaKnown RBP21.25■□□□□ 0.99
SMG6-214ENST00000573827 BCRP11274 1271 aa21.24■□□□□ 0.99
SMG6-214ENST00000573827 MIGA1Q8NAN2 632 aa21.24■□□□□ 0.99
SMG6-214ENST00000573827 NOL10Q9BSC4 688 aaKnown RBP21.24■□□□□ 0.99
SMG6-214ENST00000573827 PALD1Q9ULE6 856 aa21.24■□□□□ 0.99
SMG6-214ENST00000573827 CYP2C8P10632 490 aa21.23■□□□□ 0.99
SMG6-214ENST00000573827 SHROOM1Q2M3G4 852 aaPredicted RBP21.23■□□□□ 0.99
SMG6-214ENST00000573827 CPA4Q9UI42 421 aa21.23■□□□□ 0.99
SMG6-214ENST00000573827 SLC45A1Q9Y2W3 748 aa21.23■□□□□ 0.99
SMG6-214ENST00000573827 TCRBV5S4A2TA0A5A2 114 aa21.22■□□□□ 0.99
SMG6-214ENST00000573827 TRIM75PA6NK02 468 aa21.22■□□□□ 0.99
SMG6-214ENST00000573827 MAP3K12Q12852 859 aa21.22■□□□□ 0.99
SMG6-214ENST00000573827 FASTKD5Q7L8L6 764 aaKnown RBP21.22■□□□□ 0.99
SMG6-214ENST00000573827 EDC3Q96F86 508 aaKnown RBP21.22■□□□□ 0.99
SMG6-214ENST00000573827 ATAD5Q96QE3 1844 aa21.22■□□□□ 0.99
SMG6-214ENST00000573827 DDX60LQ5H9U9 1706 aaKnown RBP21.21■□□□□ 0.99
SMG6-214ENST00000573827 IFIT2P09913 472 aaKnown RBP21.21■□□□□ 0.99
SMG6-214ENST00000573827 PDE6AP16499 860 aa21.21■□□□□ 0.99
SMG6-214ENST00000573827 FOXP4Q8IVH2 680 aaPredicted RBP21.21■□□□□ 0.99
SMG6-214ENST00000573827 PARK7Q99497 189 aaKnown RBP21.21■□□□□ 0.99
SMG6-214ENST00000573827 PTCH2Q9Y6C5 1203 aa21.21■□□□□ 0.99
SMG6-214ENST00000573827 LOC285556D6RIA3 1793 aa21.2■□□□□ 0.99
SMG6-214ENST00000573827 ATP5JP18859 108 aa21.2■□□□□ 0.98
SMG6-214ENST00000573827 TREML2Q5T2D2 321 aa21.2■□□□□ 0.98
SMG6-214ENST00000573827 CERS3Q8IU89 383 aa21.2■□□□□ 0.98
SMG6-214ENST00000573827 ZNF280CQ8ND82 737 aa21.2■□□□□ 0.98
SMG6-214ENST00000573827 TRIM47Q96LD4 638 aa21.2■□□□□ 0.98
SMG6-214ENST00000573827 SAP30BPQ9UHR5 308 aaKnown RBP21.2■□□□□ 0.98
SMG6-214ENST00000573827 GOLIM4O00461 696 aa21.19■□□□□ 0.98
SMG6-214ENST00000573827 SPP2Q13103 211 aa21.19■□□□□ 0.98
SMG6-214ENST00000573827 TTF1Q15361 905 aaPredicted RBP21.19■□□□□ 0.98
SMG6-214ENST00000573827 WDR18Q9BV38 432 aa21.19■□□□□ 0.98
SMG6-214ENST00000573827 DCTPP1Q9H773 170 aa21.19■□□□□ 0.98
SMG6-214ENST00000573827 AGTPBP1Q9UPW5 1226 aa21.19■□□□□ 0.98
SMG6-214ENST00000573827 MYH1P12882 1939 aa21.18■□□□□ 0.98
SMG6-214ENST00000573827 SMARCA5O60264 1052 aaPredicted RBP21.18■□□□□ 0.98
SMG6-214ENST00000573827 SH3D19Q5HYK7 790 aa21.18■□□□□ 0.98
SMG6-214ENST00000573827 SLC9C2Q5TAH2 1124 aa21.18■□□□□ 0.98
SMG6-214ENST00000573827 GADL1Q6ZQY3 521 aa21.18■□□□□ 0.98
SMG6-214ENST00000573827 ZNF333Q96JL9 665 aa21.18■□□□□ 0.98
SMG6-214ENST00000573827 HAUS7Q99871 368 aa21.18■□□□□ 0.98
SMG6-214ENST00000573827 USP17L5A8MUK1 530 aa21.17■□□□□ 0.98
SMG6-214ENST00000573827 GNRH1P01148 92 aa21.17■□□□□ 0.98
SMG6-214ENST00000573827 ARHGEF6Q15052 776 aa21.17■□□□□ 0.98
SMG6-214ENST00000573827 SLFNL1Q499Z3 407 aa21.17■□□□□ 0.98
SMG6-214ENST00000573827 TATDN1Q6P1N9 297 aa21.17■□□□□ 0.98
SMG6-214ENST00000573827 PROCA1Q8NCQ7 364 aaPredicted RBP21.17■□□□□ 0.98
SMG6-214ENST00000573827 DNAJC2Q99543 621 aaKnown RBP21.17■□□□□ 0.98
SMG6-214ENST00000573827 TBC1D2Q9BYX2 928 aa21.17■□□□□ 0.98
SMG6-214ENST00000573827 LRRCC1Q9C099 1032 aa21.17■□□□□ 0.98
SMG6-214ENST00000573827 EHD4Q9H223 541 aa21.17■□□□□ 0.98
SMG6-214ENST00000573827 BOLA2Q9H3K6 86 aa21.17■□□□□ 0.98
SMG6-214ENST00000573827 PCDHB15Q9Y5E8 787 aa21.17■□□□□ 0.98
SMG6-214ENST00000573827 ZNF532Q9HCE3 1301 aa21.17■□□□□ 0.98
SMG6-214ENST00000573827 RBBP6Q7Z6E9 1792 aaKnown RBP21.17■□□□□ 0.98
SMG6-214ENST00000573827 POTEFA5A3E0 1075 aa21.16■□□□□ 0.98
SMG6-214ENST00000573827 CHGBP05060 677 aa21.16■□□□□ 0.98
SMG6-214ENST00000573827 PSMC4P43686 418 aa21.16■□□□□ 0.98
SMG6-214ENST00000573827 PAG1Q9NWQ8 432 aa21.16■□□□□ 0.98
SMG6-214ENST00000573827 ZBTB21Q9ULJ3 1066 aa21.16■□□□□ 0.98
SMG6-214ENST00000573827 MAGEB6P1A0A0J9YX57 407 aa21.15■□□□□ 0.98
SMG6-214ENST00000573827 GDF11O95390 407 aa21.15■□□□□ 0.98
SMG6-214ENST00000573827 ASNSP08243 561 aa21.15■□□□□ 0.98
SMG6-214ENST00000573827 OSBPP22059 807 aa21.15■□□□□ 0.98
SMG6-214ENST00000573827 HMGCS2P54868 508 aa21.15■□□□□ 0.98
SMG6-214ENST00000573827 EVX2Q03828 476 aa21.15■□□□□ 0.98
SMG6-214ENST00000573827 SLC4A8Q2Y0W8 1093 aa21.15■□□□□ 0.98
SMG6-214ENST00000573827 GINM1Q9NU53 330 aa21.15■□□□□ 0.98
SMG6-214ENST00000573827 SRRDQ9UH36 339 aa21.15■□□□□ 0.98
SMG6-214ENST00000573827 CEP290O15078 2479 aa21.14■□□□□ 0.98
SMG6-214ENST00000573827 HLA-DOAP06340 250 aa21.14■□□□□ 0.97
SMG6-214ENST00000573827 ADD2P35612 726 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms