RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 DIXDC1Q155Q3 683 aa12.7□□□□□ -0.38
CHMP6-203ENST00000572525 LRRC26Q2I0M4 334 aa12.7□□□□□ -0.38
CHMP6-203ENST00000572525 SH3D19Q5HYK7 790 aa12.7□□□□□ -0.38
CHMP6-203ENST00000572525 ZGPATQ8N5A5 531 aaKnown RBP12.7□□□□□ -0.38
CHMP6-203ENST00000572525 MAFAQ8NHW3 353 aaPredicted RBP12.7□□□□□ -0.38
CHMP6-203ENST00000572525 LPIN2Q92539 896 aa12.7□□□□□ -0.38
CHMP6-203ENST00000572525 FAM163AQ96GL9 167 aaPredicted RBP12.7□□□□□ -0.38
CHMP6-203ENST00000572525 OSBPL5Q9H0X9 879 aaPredicted RBP12.7□□□□□ -0.38
CHMP6-203ENST00000572525 TMEM265A0A087WTH1 108 aa12.69□□□□□ -0.38
CHMP6-203ENST00000572525 SLC5A1P13866 664 aa12.69□□□□□ -0.38
CHMP6-203ENST00000572525 TRIM32Q13049 653 aa12.69□□□□□ -0.38
CHMP6-203ENST00000572525 TREML2Q5T2D2 321 aa12.69□□□□□ -0.38
CHMP6-203ENST00000572525 ZFPM1Q8IX07 1006 aa12.69□□□□□ -0.38
CHMP6-203ENST00000572525 LBHD1Q9BQE6 289 aaPredicted RBP12.69□□□□□ -0.38
CHMP6-203ENST00000572525 NUDT12Q9BQG2 462 aa12.69□□□□□ -0.38
CHMP6-203ENST00000572525 BICC1Q9H694 974 aaKnown RBP12.69□□□□□ -0.38
CHMP6-203ENST00000572525 FBXO3Q9UK99 471 aa12.69□□□□□ -0.38
CHMP6-203ENST00000572525 SIPA1L1O43166 1804 aa12.69□□□□□ -0.38
CHMP6-203ENST00000572525 PDS5AQ29RF7 1337 aaKnown RBP12.68□□□□□ -0.38
CHMP6-203ENST00000572525 MAP4K4O95819 1239 aaPredicted RBP12.68□□□□□ -0.38
CHMP6-203ENST00000572525 NBPF7P0C2Y1 421 aaPredicted RBP12.68□□□□□ -0.38
CHMP6-203ENST00000572525 MDM2Q00987 491 aaPredicted RBP12.68□□□□□ -0.38
CHMP6-203ENST00000572525 DIEXFQ68CQ4 756 aaKnown RBP12.68□□□□□ -0.38
CHMP6-203ENST00000572525 LHX8Q68G74 356 aa12.68□□□□□ -0.38
CHMP6-203ENST00000572525 SH3BP5LQ7L8J4 393 aa12.68□□□□□ -0.38
CHMP6-203ENST00000572525 SLF2Q8IX21 1173 aa12.68□□□□□ -0.38
CHMP6-203ENST00000572525 ANKRD44Q8N8A2 993 aa12.68□□□□□ -0.38
CHMP6-203ENST00000572525 ZNF280CQ8ND82 737 aa12.68□□□□□ -0.38
CHMP6-203ENST00000572525 USP6NLQ92738 828 aa12.68□□□□□ -0.38
CHMP6-203ENST00000572525 CDX2Q99626 313 aaPredicted RBP12.68□□□□□ -0.38
CHMP6-203ENST00000572525 ASCC2Q9H1I8 757 aaPredicted RBP12.68□□□□□ -0.38
CHMP6-203ENST00000572525 GNL3LQ9NVN8 582 aaKnown RBP12.68□□□□□ -0.38
CHMP6-203ENST00000572525 ZNF236Q9UL36 1845 aa12.67□□□□□ -0.38
CHMP6-203ENST00000572525 MSCO60682 206 aa12.67□□□□□ -0.38
CHMP6-203ENST00000572525 MAPK4P31152 587 aa12.67□□□□□ -0.38
CHMP6-203ENST00000572525 HOXA7P31268 230 aaPredicted RBP12.67□□□□□ -0.38
CHMP6-203ENST00000572525 SMAD3P84022 425 aaKnown RBP12.67□□□□□ -0.38
CHMP6-203ENST00000572525 WDR63Q8IWG1 891 aa12.67□□□□□ -0.38
CHMP6-203ENST00000572525 GTF3C2Q8WUA4 911 aaPredicted RBP12.67□□□□□ -0.38
CHMP6-203ENST00000572525 DENND2AQ9ULE3 1009 aa12.67□□□□□ -0.38
CHMP6-203ENST00000572525 CHD9Q3L8U1 2897 aa12.66□□□□□ -0.38
CHMP6-203ENST00000572525 DDTLA6NHG4 134 aaPredicted RBP12.66□□□□□ -0.38
CHMP6-203ENST00000572525 ZKSCAN1P17029 563 aaPredicted RBP12.66□□□□□ -0.38
CHMP6-203ENST00000572525 CACNB2Q08289 660 aaPredicted RBP12.66□□□□□ -0.38
CHMP6-203ENST00000572525 ZSCAN29Q8IWY8 852 aaPredicted RBP12.66□□□□□ -0.38
CHMP6-203ENST00000572525 SEMA6BQ9H3T3 888 aa12.66□□□□□ -0.38
CHMP6-203ENST00000572525 PIEZO1Q92508 2521 aa12.65□□□□□ -0.38
CHMP6-203ENST00000572525 EYA2O00167 538 aa12.65□□□□□ -0.38
CHMP6-203ENST00000572525 CYP2B6P20813 491 aa12.65□□□□□ -0.38
CHMP6-203ENST00000572525 COL9A1P20849 921 aa12.65□□□□□ -0.38
CHMP6-203ENST00000572525 RGS2P41220 211 aa12.65□□□□□ -0.38
CHMP6-203ENST00000572525 EXOSC9Q06265 439 aaKnown RBP12.65□□□□□ -0.38
CHMP6-203ENST00000572525 SPP2Q13103 211 aa12.65□□□□□ -0.38
CHMP6-203ENST00000572525 DDX10Q13206 875 aaKnown RBP12.65□□□□□ -0.38
CHMP6-203ENST00000572525 PDE3AQ14432 1141 aa12.65□□□□□ -0.38
CHMP6-203ENST00000572525 APBA2Q99767 749 aa12.65□□□□□ -0.38
CHMP6-203ENST00000572525 WDR18Q9BV38 432 aa12.65□□□□□ -0.38
CHMP6-203ENST00000572525 AS3MTQ9HBK9 375 aa12.65□□□□□ -0.38
CHMP6-203ENST00000572525 USP17L5A8MUK1 530 aa12.64□□□□□ -0.39
CHMP6-203ENST00000572525 CAP2P40123 477 aa12.64□□□□□ -0.39
CHMP6-203ENST00000572525 HMGCS2P54868 508 aa12.64□□□□□ -0.39
CHMP6-203ENST00000572525 TJAP1Q5JTD0 557 aa12.64□□□□□ -0.39
CHMP6-203ENST00000572525 MORN1Q5T089 497 aa12.64□□□□□ -0.39
CHMP6-203ENST00000572525 GPRC5AQ8NFJ5 357 aa12.64□□□□□ -0.39
CHMP6-203ENST00000572525 FAM161BQ96MY7 647 aa12.64□□□□□ -0.39
CHMP6-203ENST00000572525 DDX4Q9NQI0 724 aaKnown RBP12.64□□□□□ -0.39
CHMP6-203ENST00000572525 PRKAG2Q9UGJ0 569 aa12.64□□□□□ -0.39
CHMP6-203ENST00000572525 HERC5Q9UII4 1024 aaKnown RBP12.64□□□□□ -0.39
CHMP6-203ENST00000572525 TRANK1O15050 2925 aa12.64□□□□□ -0.39
CHMP6-203ENST00000572525 ZNFX1Q9P2E3 1918 aaKnown RBP12.63□□□□□ -0.39
CHMP6-203ENST00000572525 TNFRSF10AO00220 468 aa12.63□□□□□ -0.39
CHMP6-203ENST00000572525 RFX5P48382 616 aaPredicted RBP12.63□□□□□ -0.39
CHMP6-203ENST00000572525 IRX3P78415 501 aaPredicted RBP12.63□□□□□ -0.39
CHMP6-203ENST00000572525 SLC4A10Q6U841 1118 aa12.63□□□□□ -0.39
CHMP6-203ENST00000572525 LPAR1Q92633 364 aa12.63□□□□□ -0.39
CHMP6-203ENST00000572525 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.63□□□□□ -0.398e-10■■■■■ 55.9
CHMP6-203ENST00000572525 GINM1Q9NU53 330 aa12.63□□□□□ -0.39
CHMP6-203ENST00000572525 MROH7-TTC4A0A0A0MT08 1334 aa12.62□□□□□ -0.39
CHMP6-203ENST00000572525 SMCHD1A6NHR9 2005 aa12.62□□□□□ -0.39
CHMP6-203ENST00000572525 GPR75-ASB3A0A0A6YYF3 556 aa12.62□□□□□ -0.39
CHMP6-203ENST00000572525 C19orf81C9J6K1 198 aa12.62□□□□□ -0.39
CHMP6-203ENST00000572525 DNM1LO00429 736 aa12.62□□□□□ -0.39
CHMP6-203ENST00000572525 CIAO1O76071 339 aa12.62□□□□□ -0.39
CHMP6-203ENST00000572525 CCND3P30281 292 aaPredicted RBP12.62□□□□□ -0.39
CHMP6-203ENST00000572525 BACE1P56817 501 aa12.62□□□□□ -0.39
CHMP6-203ENST00000572525 RHBDL3P58872 404 aa12.62□□□□□ -0.39
CHMP6-203ENST00000572525 HERVK_113P62684 666 aa12.62□□□□□ -0.39
CHMP6-203ENST00000572525 ATP2B3Q16720 1220 aa12.62□□□□□ -0.39
CHMP6-203ENST00000572525 SPTY2D1Q68D10 685 aaPredicted RBP12.62□□□□□ -0.39
CHMP6-203ENST00000572525 ATG9AQ7Z3C6 839 aa12.62□□□□□ -0.39
CHMP6-203ENST00000572525 CCDC84Q86UT8 332 aaPredicted RBP12.62□□□□□ -0.39
CHMP6-203ENST00000572525 DZIP1Q86YF9 867 aaKnown RBP12.62□□□□□ -0.39
CHMP6-203ENST00000572525 TTYH1Q9H313 450 aaPredicted RBP12.62□□□□□ -0.39
CHMP6-203ENST00000572525 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.62□□□□□ -0.39
CHMP6-203ENST00000572525 MYH1P12882 1939 aa12.61□□□□□ -0.39
CHMP6-203ENST00000572525 ASNSP08243 561 aa12.61□□□□□ -0.39
CHMP6-203ENST00000572525 HOXC6P09630 235 aa12.61□□□□□ -0.39
CHMP6-203ENST00000572525 FOSL2P15408 326 aa12.61□□□□□ -0.39
CHMP6-203ENST00000572525 PLA2G5P39877 138 aa12.61□□□□□ -0.39
CHMP6-203ENST00000572525 BTDP43251 543 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms