RNA–Protein interactions for RNA: ENST00000572383.1

PFN1-202, Transcript of profilin 1, humanhuman

TSL 3

Gene PFN1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-202ENST00000572383 PALD1Q9ULE6 856 aa21.81■■□□□ 1.08
PFN1-202ENST00000572383 MANSC4A6NHS7 340 aaPredicted RBP21.8■■□□□ 1.08
PFN1-202ENST00000572383 M0R2C6 588 aa21.8■■□□□ 1.08
PFN1-202ENST00000572383 PRKAB2O43741 272 aa21.8■■□□□ 1.08
PFN1-202ENST00000572383 INHBEP58166 350 aa21.8■■□□□ 1.08
PFN1-202ENST00000572383 SLC4A8Q2Y0W8 1093 aa21.8■■□□□ 1.08
PFN1-202ENST00000572383 SKAP1Q86WV1 359 aa21.8■■□□□ 1.08
PFN1-202ENST00000572383 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.8■■□□□ 1.084e-22■□□□□ 9.3
PFN1-202ENST00000572383 SEC62Q99442 399 aaKnown RBP21.8■■□□□ 1.08
PFN1-202ENST00000572383 ZNF341Q9BYN7 854 aa21.8■■□□□ 1.08
PFN1-202ENST00000572383 GSPT1P15170 499 aaKnown RBP21.79■■□□□ 1.08
PFN1-202ENST00000572383 TTC22Q5TAA0 569 aa21.79■■□□□ 1.08
PFN1-202ENST00000572383 WRNIP1Q96S55 665 aa21.79■■□□□ 1.08
PFN1-202ENST00000572383 DHX36Q9H2U1 1008 aaKnown RBP21.79■■□□□ 1.08
PFN1-202ENST00000572383 PPP4R2Q9NY27 417 aa21.79■■□□□ 1.08
PFN1-202ENST00000572383 FAM196BA6NMK8 535 aa21.78■■□□□ 1.08
PFN1-202ENST00000572383 MAP3K9P80192 1104 aa21.78■■□□□ 1.08
PFN1-202ENST00000572383 MAP3K10Q02779 954 aa21.78■■□□□ 1.08
PFN1-202ENST00000572383 DGKZQ13574 1117 aa21.78■■□□□ 1.08
PFN1-202ENST00000572383 ZMYM1Q5SVZ6 1142 aa21.78■■□□□ 1.08
PFN1-202ENST00000572383 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.78■■□□□ 1.08
PFN1-202ENST00000572383 STRBPQ96SI9 672 aaKnown RBP21.78■■□□□ 1.08
PFN1-202ENST00000572383 SLC4A4Q9Y6R1 1079 aa21.78■■□□□ 1.08
PFN1-202ENST00000572383 GPAA1O43292 621 aa21.77■■□□□ 1.08
PFN1-202ENST00000572383 ALDH1A1P00352 501 aa21.77■■□□□ 1.08
PFN1-202ENST00000572383 VGLL4Q14135 290 aa21.77■■□□□ 1.08
PFN1-202ENST00000572383 ZKSCAN4Q969J2 545 aaPredicted RBP21.77■■□□□ 1.08
PFN1-202ENST00000572383 CFHR5Q9BXR6 569 aa21.77■■□□□ 1.08
PFN1-202ENST00000572383 DCP1AQ9NPI6 582 aaPredicted RBP21.77■■□□□ 1.08
PFN1-202ENST00000572383 PI4KBQ9UBF8 816 aa21.77■■□□□ 1.08
PFN1-202ENST00000572383 ZNF112Q9UJU3 913 aa21.77■■□□□ 1.08
PFN1-202ENST00000572383 DDX60LQ5H9U9 1706 aaKnown RBP21.77■■□□□ 1.08
PFN1-202ENST00000572383 NAV1Q8NEY1 1877 aa21.77■■□□□ 1.08
PFN1-202ENST00000572383 SIPA1L1O43166 1804 aa21.76■■□□□ 1.07
PFN1-202ENST00000572383 INPP5BP32019 993 aa21.76■■□□□ 1.07
PFN1-202ENST00000572383 NOM1Q5C9Z4 860 aaKnown RBP21.76■■□□□ 1.07
PFN1-202ENST00000572383 ELP3Q9H9T3 547 aa21.76■■□□□ 1.07
PFN1-202ENST00000572383 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.76■■□□□ 1.07
PFN1-202ENST00000572383 MYH1P12882 1939 aa21.76■■□□□ 1.07
PFN1-202ENST00000572383 PHF20L1A8MW92 1017 aa21.75■■□□□ 1.07
PFN1-202ENST00000572383 TBC1D12O60347 775 aa21.75■■□□□ 1.07
PFN1-202ENST00000572383 HLA-DOAP06340 250 aa21.75■■□□□ 1.07
PFN1-202ENST00000572383 FAM227BQ96M60 508 aa21.75■■□□□ 1.07
PFN1-202ENST00000572383 ATP8A2Q9NTI2 1148 aa21.75■■□□□ 1.07
PFN1-202ENST00000572383 MCM9Q9NXL9 1143 aa21.75■■□□□ 1.07
PFN1-202ENST00000572383 CSADQ9Y600 493 aa21.75■■□□□ 1.07
PFN1-202ENST00000572383 CCDC85CA6NKD9 419 aa21.74■■□□□ 1.07
PFN1-202ENST00000572383 TBC1D8O95759 1140 aa21.74■■□□□ 1.07
PFN1-202ENST00000572383 SDSP20132 328 aa21.74■■□□□ 1.07
PFN1-202ENST00000572383 PLCD1P51178 756 aa21.74■■□□□ 1.07
PFN1-202ENST00000572383 CCDC129Q6ZRS4 1044 aa21.74■■□□□ 1.07
PFN1-202ENST00000572383 TICAM2Q86XR7 235 aa21.74■■□□□ 1.07
PFN1-202ENST00000572383 OPTNQ96CV9 577 aa21.74■■□□□ 1.07
PFN1-202ENST00000572383 SNCAIPQ9Y6H5 919 aa21.74■■□□□ 1.07
PFN1-202ENST00000572383 A0A0D9SFI3 127 aa21.73■■□□□ 1.07
PFN1-202ENST00000572383 GSG1L2A8MUP6 293 aa21.73■■□□□ 1.07
PFN1-202ENST00000572383 POLR3DP05423 398 aaPredicted RBP21.73■■□□□ 1.07
PFN1-202ENST00000572383 GJA5P36382 358 aa21.73■■□□□ 1.07
PFN1-202ENST00000572383 EVX2Q03828 476 aa21.73■■□□□ 1.07
PFN1-202ENST00000572383 NMIQ13287 307 aaPredicted RBP21.73■■□□□ 1.07
PFN1-202ENST00000572383 METTL16Q86W50 562 aaKnown RBP21.73■■□□□ 1.07
PFN1-202ENST00000572383 IFNL1Q8IU54 200 aa21.73■■□□□ 1.07
PFN1-202ENST00000572383 FOXP4Q8IVH2 680 aaPredicted RBP21.73■■□□□ 1.07
PFN1-202ENST00000572383 CRACR2BQ8N4Y2 399 aaPredicted RBP21.73■■□□□ 1.07
PFN1-202ENST00000572383 CNKSR2Q8WXI2 1034 aa21.73■■□□□ 1.07
PFN1-202ENST00000572383 DNAJC18Q9H819 358 aa21.73■■□□□ 1.07
PFN1-202ENST00000572383 HELLSQ9NRZ9 838 aa21.73■■□□□ 1.07
PFN1-202ENST00000572383 HERC5Q9UII4 1024 aaKnown RBP21.73■■□□□ 1.07
PFN1-202ENST00000572383 CYP2D6P10635 497 aa21.72■■□□□ 1.07
PFN1-202ENST00000572383 TTC6Q86TZ1 520 aa21.72■■□□□ 1.07
PFN1-202ENST00000572383 TESPA1A2RU30 521 aaPredicted RBP21.71■■□□□ 1.07
PFN1-202ENST00000572383 GPR25O00155 361 aa21.71■■□□□ 1.07
PFN1-202ENST00000572383 GNAT2P19087 354 aa21.71■■□□□ 1.07
PFN1-202ENST00000572383 RRP1BQ14684 758 aaKnown RBP21.71■■□□□ 1.07
PFN1-202ENST00000572383 OTUD7BQ6GQQ9 843 aa21.71■■□□□ 1.07
PFN1-202ENST00000572383 ZNF296Q8WUU4 475 aaPredicted RBP21.71■■□□□ 1.07
PFN1-202ENST00000572383 DDRGK1Q96HY6 314 aa21.71■■□□□ 1.07
PFN1-202ENST00000572383 TRIM34Q9BYJ4 488 aa21.71■■□□□ 1.07
PFN1-202ENST00000572383 R3HDMLQ9H3Y0 253 aa21.71■■□□□ 1.07
PFN1-202ENST00000572383 EPB41L4AQ9HCS5 686 aaPredicted RBP21.71■■□□□ 1.07
PFN1-202ENST00000572383 CYP2D7A0A087X1C5 515 aa21.7■■□□□ 1.06
PFN1-202ENST00000572383 PATL2C9JE40 543 aaKnown RBP21.7■■□□□ 1.06
PFN1-202ENST00000572383 USP17L12C9JPN9 530 aa21.7■■□□□ 1.06
PFN1-202ENST00000572383 USP17L21D6R901 530 aa21.7■■□□□ 1.06
PFN1-202ENST00000572383 IGF2BP3O00425 579 aaKnown RBP eCLIP21.7■■□□□ 1.06
PFN1-202ENST00000572383 APPP05067 770 aa21.7■■□□□ 1.06
PFN1-202ENST00000572383 MCMDC2Q4G0Z9 681 aa21.7■■□□□ 1.06
PFN1-202ENST00000572383 NOL9Q5SY16 702 aaKnown RBP21.7■■□□□ 1.06
PFN1-202ENST00000572383 CTU1Q7Z7A3 348 aaKnown RBP21.7■■□□□ 1.06
PFN1-202ENST00000572383 EHD4Q9H223 541 aa21.7■■□□□ 1.06
PFN1-202ENST00000572383 SERPINB13Q9UIV8 391 aa21.7■■□□□ 1.06
PFN1-202ENST00000572383 BAZ2AQ9UIF9 1905 aaKnown RBP21.69■■□□□ 1.06
PFN1-202ENST00000572383 SPDYE5A6NIY4 337 aa21.69■■□□□ 1.06
PFN1-202ENST00000572383 SMIM22K7EJ46 135 aa21.69■■□□□ 1.06
PFN1-202ENST00000572383 CTNND1O60716 968 aaKnown RBP21.69■■□□□ 1.06
PFN1-202ENST00000572383 CTR9Q6PD62 1173 aa21.69■■□□□ 1.06
PFN1-202ENST00000572383 CWC27Q6UX04 472 aaKnown RBP21.69■■□□□ 1.06
PFN1-202ENST00000572383 SCYL3Q8IZE3 742 aa21.69■■□□□ 1.06
PFN1-202ENST00000572383 OTUD5Q96G74 571 aa21.69■■□□□ 1.06
PFN1-202ENST00000572383 DIAPH3Q9NSV4 1193 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms