RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 MIGA2Q7L4E1 593 aa9.42□□□□□ -0.9
SMG6-211ENST00000572369 ANKRD13AQ8IZ07 590 aa9.42□□□□□ -0.9
SMG6-211ENST00000572369 MIGA1Q8NAN2 632 aa9.42□□□□□ -0.9
SMG6-211ENST00000572369 SH3RF3Q8TEJ3 882 aaPredicted RBP9.42□□□□□ -0.9
SMG6-211ENST00000572369 ZNF384Q8TF68 577 aa9.42□□□□□ -0.9
SMG6-211ENST00000572369 TEPSINQ96N21 525 aa9.42□□□□□ -0.9
SMG6-211ENST00000572369 IDI2Q9BXS1 227 aa9.42□□□□□ -0.9
SMG6-211ENST00000572369 FAM198AQ9UFP1 575 aa9.42□□□□□ -0.9
SMG6-211ENST00000572369 STAP2Q9UGK3 403 aa9.42□□□□□ -0.9
SMG6-211ENST00000572369 CSADQ9Y600 493 aa9.42□□□□□ -0.9
SMG6-211ENST00000572369 RPAP1Q9BWH6 1393 aaPredicted RBP9.41□□□□□ -0.9
SMG6-211ENST00000572369 FOCADQ5VW36 1801 aa9.41□□□□□ -0.9
SMG6-211ENST00000572369 MX1P20591 662 aa9.41□□□□□ -0.9
SMG6-211ENST00000572369 USP5P45974 858 aa9.41□□□□□ -0.9
SMG6-211ENST00000572369 DYNLL1P63167 89 aaKnown RBP9.41□□□□□ -0.9
SMG6-211ENST00000572369 MAP3K9P80192 1104 aa9.41□□□□□ -0.9
SMG6-211ENST00000572369 SREBF2Q12772 1141 aa9.41□□□□□ -0.9
SMG6-211ENST00000572369 TSHZ3Q63HK5 1081 aa9.41□□□□□ -0.9
SMG6-211ENST00000572369 ZSCAN25Q6NSZ9 544 aa9.41□□□□□ -0.9
SMG6-211ENST00000572369 TMED8Q6PL24 325 aaPredicted RBP9.41□□□□□ -0.9
SMG6-211ENST00000572369 NBPF11Q86T75 865 aa9.41□□□□□ -0.9
SMG6-211ENST00000572369 CERS3Q8IU89 383 aa9.41□□□□□ -0.9
SMG6-211ENST00000572369 CDAN1Q8IWY9 1227 aa9.41□□□□□ -0.9
SMG6-211ENST00000572369 EDC3Q96F86 508 aaKnown RBP9.41□□□□□ -0.9
SMG6-211ENST00000572369 ERO1AQ96HE7 468 aa9.41□□□□□ -0.9
SMG6-211ENST00000572369 GUCD1Q96NT3 240 aa9.41□□□□□ -0.9
SMG6-211ENST00000572369 HAUS7Q99871 368 aa9.41□□□□□ -0.9
SMG6-211ENST00000572369 TRIM34Q9BYJ4 488 aa9.41□□□□□ -0.9
SMG6-211ENST00000572369 ZNF341Q9BYN7 854 aa9.41□□□□□ -0.9
SMG6-211ENST00000572369 MYH1P12882 1939 aa9.41□□□□□ -0.9
SMG6-211ENST00000572369 TTC41PQ6P2S7 1318 aa9.4□□□□□ -0.9
SMG6-211ENST00000572369 ZNF532Q9HCE3 1301 aa9.4□□□□□ -0.9
SMG6-211ENST00000572369 MAGEB6P1A0A0J9YX57 407 aa9.4□□□□□ -0.9
SMG6-211ENST00000572369 UNCXA6NJT0 531 aa9.4□□□□□ -0.9
SMG6-211ENST00000572369 WDHD1O75717 1129 aaPredicted RBP9.4□□□□□ -0.9
SMG6-211ENST00000572369 PDE6AP16499 860 aa9.4□□□□□ -0.9
SMG6-211ENST00000572369 RHBDL3P58872 404 aa9.4□□□□□ -0.9
SMG6-211ENST00000572369 MAP3K11Q16584 847 aa9.4□□□□□ -0.9
SMG6-211ENST00000572369 SLC9C1Q4G0N8 1177 aa9.4□□□□□ -0.9
SMG6-211ENST00000572369 LDLRAD1Q5T700 205 aa9.4□□□□□ -0.9
SMG6-211ENST00000572369 ADGRA1Q86SQ6 560 aa9.4□□□□□ -0.9
SMG6-211ENST00000572369 MAPKAPK5Q8IW41 473 aa9.4□□□□□ -0.9
SMG6-211ENST00000572369 ZFPM1Q8IX07 1006 aa9.4□□□□□ -0.9
SMG6-211ENST00000572369 TGFBRAP1Q8WUH2 860 aa9.4□□□□□ -0.9
SMG6-211ENST00000572369 SHISA4Q96DD7 197 aa9.4□□□□□ -0.9
SMG6-211ENST00000572369 CLMNQ96JQ2 1002 aa9.4□□□□□ -0.9
SMG6-211ENST00000572369 WRNIP1Q96S55 665 aa9.4□□□□□ -0.9
SMG6-211ENST00000572369 ELP3Q9H9T3 547 aa9.4□□□□□ -0.9
SMG6-211ENST00000572369 EFCC1Q9HA90 598 aa9.4□□□□□ -0.9
SMG6-211ENST00000572369 DDX4Q9NQI0 724 aaKnown RBP9.4□□□□□ -0.9
SMG6-211ENST00000572369 DDTLA6NHG4 134 aaPredicted RBP9.39□□□□□ -0.91
SMG6-211ENST00000572369 GLRX3O76003 335 aaKnown RBP9.39□□□□□ -0.91
SMG6-211ENST00000572369 MYCP01106 439 aaPredicted RBP9.39□□□□□ -0.91
SMG6-211ENST00000572369 IGHDP01880 384 aa9.39□□□□□ -0.91
SMG6-211ENST00000572369 HLA-DOAP06340 250 aa9.39□□□□□ -0.91
SMG6-211ENST00000572369 PPP4CP60510 307 aa9.39□□□□□ -0.91
SMG6-211ENST00000572369 LRRFIP1Q32MZ4 808 aaKnown RBP9.39□□□□□ -0.91
SMG6-211ENST00000572369 SPRYD7Q5W111 196 aa9.39□□□□□ -0.91
SMG6-211ENST00000572369 CRACR2BQ8N4Y2 399 aaPredicted RBP9.39□□□□□ -0.91
SMG6-211ENST00000572369 CD99L2Q8TCZ2 262 aa9.39□□□□□ -0.91
SMG6-211ENST00000572369 CRNKL1Q9BZJ0 848 aaKnown RBP9.39□□□□□ -0.91
SMG6-211ENST00000572369 LNPKQ9C0E8 428 aa9.39□□□□□ -0.91
SMG6-211ENST00000572369 OSBPL5Q9H0X9 879 aaPredicted RBP9.39□□□□□ -0.91
SMG6-211ENST00000572369 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMG6-211ENST00000572369 NAV1Q8NEY1 1877 aa9.38□□□□□ -0.91
SMG6-211ENST00000572369 NPM3O75607 178 aaKnown RBP9.38□□□□□ -0.91
SMG6-211ENST00000572369 ALDH1A1P00352 501 aa9.38□□□□□ -0.91
SMG6-211ENST00000572369 NEFLP07196 543 aa9.38□□□□□ -0.91
SMG6-211ENST00000572369 ZBTB48P10074 688 aaPredicted RBP9.38□□□□□ -0.91
SMG6-211ENST00000572369 BMP8BP34820 402 aa9.38□□□□□ -0.91
SMG6-211ENST00000572369 VGLL4Q14135 290 aa9.38□□□□□ -0.91
SMG6-211ENST00000572369 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.38□□□□□ -0.91
SMG6-211ENST00000572369 ALYREFQ86V81 257 aaKnown RBP9.38□□□□□ -0.91
SMG6-211ENST00000572369 CHD1LQ86WJ1 897 aa9.38□□□□□ -0.91
SMG6-211ENST00000572369 SMC5Q8IY18 1101 aa9.38□□□□□ -0.91
SMG6-211ENST00000572369 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMG6-211ENST00000572369 OTUD7AQ8TE49 926 aaPredicted RBP9.38□□□□□ -0.91
SMG6-211ENST00000572369 ZKSCAN4Q969J2 545 aaPredicted RBP9.38□□□□□ -0.91
SMG6-211ENST00000572369 OPTNQ96CV9 577 aa9.38□□□□□ -0.91
SMG6-211ENST00000572369 DDRGK1Q96HY6 314 aa9.38□□□□□ -0.91
SMG6-211ENST00000572369 WNK4Q96J92 1243 aa9.38□□□□□ -0.91
SMG6-211ENST00000572369 FSD1Q9BTV5 496 aa9.38□□□□□ -0.91
SMG6-211ENST00000572369 DHX36Q9H2U1 1008 aaKnown RBP9.38□□□□□ -0.91
SMG6-211ENST00000572369 SAP30BPQ9UHR5 308 aaKnown RBP9.38□□□□□ -0.91
SMG6-211ENST00000572369 ATAD5Q96QE3 1844 aa9.38□□□□□ -0.91
SMG6-211ENST00000572369 RFX7Q2KHR2 1363 aa9.37□□□□□ -0.91
SMG6-211ENST00000572369 FLT1P17948 1338 aa9.37□□□□□ -0.91
SMG6-211ENST00000572369 DOCK1Q14185 1865 aa9.37□□□□□ -0.91
SMG6-211ENST00000572369 MANSC4A6NHS7 340 aaPredicted RBP9.37□□□□□ -0.91
SMG6-211ENST00000572369 CENPBP07199 599 aaPredicted RBP9.37□□□□□ -0.91
SMG6-211ENST00000572369 INPP5BP32019 993 aa9.37□□□□□ -0.91
SMG6-211ENST00000572369 ADD2P35612 726 aa9.37□□□□□ -0.91
SMG6-211ENST00000572369 SH3BP5LQ7L8J4 393 aa9.37□□□□□ -0.91
SMG6-211ENST00000572369 UBE2Q1Q7Z7E8 422 aa9.37□□□□□ -0.91
SMG6-211ENST00000572369 ERO1BQ86YB8 467 aa9.37□□□□□ -0.91
SMG6-211ENST00000572369 AMOTL1Q8IY63 956 aa9.37□□□□□ -0.91
SMG6-211ENST00000572369 KBTBD3Q8NAB2 608 aa9.37□□□□□ -0.91
SMG6-211ENST00000572369 MAFAQ8NHW3 353 aaPredicted RBP9.37□□□□□ -0.91
SMG6-211ENST00000572369 GDF15Q99988 308 aa9.37□□□□□ -0.91
SMG6-211ENST00000572369 ARMT1Q9H993 441 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms