RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 ZNF532Q9HCE3 1301 aa15.36■□□□□ 0.05
TVP23B-204ENST00000571018 IRF6O14896 467 aa15.35■□□□□ 0.05
TVP23B-204ENST00000571018 CTNND1O60716 968 aaKnown RBP15.35■□□□□ 0.05
TVP23B-204ENST00000571018 TBC1D8O95759 1140 aa15.35■□□□□ 0.05
TVP23B-204ENST00000571018 OTUD7BQ6GQQ9 843 aa15.35■□□□□ 0.05
TVP23B-204ENST00000571018 SCYL3Q8IZE3 742 aa15.35■□□□□ 0.05
TVP23B-204ENST00000571018 PTPN18Q99952 460 aa15.35■□□□□ 0.05
TVP23B-204ENST00000571018 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.35■□□□□ 0.05
TVP23B-204ENST00000571018 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.35■□□□□ 0.05
TVP23B-204ENST00000571018 MAGEB6P1A0A0J9YX57 407 aa15.34■□□□□ 0.05
TVP23B-204ENST00000571018 ADD2P35612 726 aa15.34■□□□□ 0.05
TVP23B-204ENST00000571018 NOM1Q5C9Z4 860 aaKnown RBP15.34■□□□□ 0.05
TVP23B-204ENST00000571018 FOXP4Q8IVH2 680 aaPredicted RBP15.34■□□□□ 0.05
TVP23B-204ENST00000571018 BRI3BPQ8WY22 251 aa15.34■□□□□ 0.05
TVP23B-204ENST00000571018 HERC5Q9UII4 1024 aaKnown RBP15.34■□□□□ 0.05
TVP23B-204ENST00000571018 TTC41PQ6P2S7 1318 aa15.34■□□□□ 0.05
TVP23B-204ENST00000571018 CCL15-CCL14A0A0B4J2E2 113 aa15.33■□□□□ 0.04
TVP23B-204ENST00000571018 FAM196BA6NMK8 535 aa15.33■□□□□ 0.04
TVP23B-204ENST00000571018 CETPP11597 493 aa15.33■□□□□ 0.04
TVP23B-204ENST00000571018 USP5P45974 858 aa15.33■□□□□ 0.04
TVP23B-204ENST00000571018 SNAPC2Q13487 334 aa15.33■□□□□ 0.04
TVP23B-204ENST00000571018 CCL15Q16663 113 aa15.33■□□□□ 0.04
TVP23B-204ENST00000571018 ANKRD45Q5TZF3 282 aa15.33■□□□□ 0.04
TVP23B-204ENST00000571018 METTL16Q86W50 562 aaKnown RBP15.33■□□□□ 0.04
TVP23B-204ENST00000571018 RWDD1Q9H446 243 aaPredicted RBP15.33■□□□□ 0.04
TVP23B-204ENST00000571018 PICK1Q9NRD5 415 aa15.33■□□□□ 0.04
TVP23B-204ENST00000571018 ZBTB47Q9UFB7 747 aaPredicted RBP15.33■□□□□ 0.04
TVP23B-204ENST00000571018 PALD1Q9ULE6 856 aa15.33■□□□□ 0.04
TVP23B-204ENST00000571018 KCNH4Q9UQ05 1017 aa15.33■□□□□ 0.04
TVP23B-204ENST00000571018 FOCADQ5VW36 1801 aa15.32■□□□□ 0.04
TVP23B-204ENST00000571018 CDK5RAP2Q96SN8 1893 aa15.32■□□□□ 0.04
TVP23B-204ENST00000571018 GPR25O00155 361 aa15.32■□□□□ 0.04
TVP23B-204ENST00000571018 PTPRAP18433 802 aa15.32■□□□□ 0.04
TVP23B-204ENST00000571018 UBE3CQ15386 1083 aa15.32■□□□□ 0.04
TVP23B-204ENST00000571018 TSHZ3Q63HK5 1081 aa15.32■□□□□ 0.04
TVP23B-204ENST00000571018 ZSCAN25Q6NSZ9 544 aa15.32■□□□□ 0.04
TVP23B-204ENST00000571018 PLCD3Q8N3E9 789 aa15.32■□□□□ 0.04
TVP23B-204ENST00000571018 OTUD7AQ8TE49 926 aaPredicted RBP15.32■□□□□ 0.04
TVP23B-204ENST00000571018 R3HDMLQ9H3Y0 253 aa15.32■□□□□ 0.04
TVP23B-204ENST00000571018 SAP30BPQ9UHR5 308 aaKnown RBP15.32■□□□□ 0.04
TVP23B-204ENST00000571018 CXCL11O14625 94 aa15.31■□□□□ 0.04
TVP23B-204ENST00000571018 ERC2O15083 957 aa15.31■□□□□ 0.04
TVP23B-204ENST00000571018 HLA-DOAP06340 250 aa15.31■□□□□ 0.04
TVP23B-204ENST00000571018 CAP2P40123 477 aa15.31■□□□□ 0.04
TVP23B-204ENST00000571018 FXR2P51116 673 aaKnown RBP eCLIP15.31■□□□□ 0.04
TVP23B-204ENST00000571018 SLFNL1Q499Z3 407 aa15.31■□□□□ 0.04
TVP23B-204ENST00000571018 SMC5Q8IY18 1101 aa15.31■□□□□ 0.04
TVP23B-204ENST00000571018 LCORLQ8N3X6 602 aa15.31■□□□□ 0.04
TVP23B-204ENST00000571018 KBTBD3Q8NAB2 608 aa15.31■□□□□ 0.04
TVP23B-204ENST00000571018 PI4K2BQ8TCG2 481 aa15.31■□□□□ 0.04
TVP23B-204ENST00000571018 ZNF296Q8WUU4 475 aaPredicted RBP15.31■□□□□ 0.04
TVP23B-204ENST00000571018 CRNKL1Q9BZJ0 848 aaKnown RBP15.31■□□□□ 0.04
TVP23B-204ENST00000571018 ZHX2Q9Y6X8 837 aa15.31■□□□□ 0.04
TVP23B-204ENST00000571018 SALL3Q9BXA9 1300 aa15.31■□□□□ 0.04
TVP23B-204ENST00000571018 GLRX3O76003 335 aaKnown RBP15.3■□□□□ 0.04
TVP23B-204ENST00000571018 IGHDP01880 384 aa15.3■□□□□ 0.04
TVP23B-204ENST00000571018 CHGBP05060 677 aa15.3■□□□□ 0.04
TVP23B-204ENST00000571018 MX1P20591 662 aa15.3■□□□□ 0.04
TVP23B-204ENST00000571018 CRHR2Q13324 411 aa15.3■□□□□ 0.04
TVP23B-204ENST00000571018 RRP1BQ14684 758 aaKnown RBP15.3■□□□□ 0.04
TVP23B-204ENST00000571018 TTC6Q86TZ1 520 aa15.3■□□□□ 0.04
TVP23B-204ENST00000571018 IFNLR1Q8IU57 520 aaPredicted RBP15.3■□□□□ 0.04
TVP23B-204ENST00000571018 FAM43AQ8N2R8 423 aa15.3■□□□□ 0.04
TVP23B-204ENST00000571018 CRACR2BQ8N4Y2 399 aaPredicted RBP15.3■□□□□ 0.04
TVP23B-204ENST00000571018 DNAJC18Q9H819 358 aa15.3■□□□□ 0.04
TVP23B-204ENST00000571018 ZCCHC17Q9NP64 241 aaKnown RBP15.3■□□□□ 0.04
TVP23B-204ENST00000571018 AFG3L2Q9Y4W6 797 aa15.3■□□□□ 0.04
TVP23B-204ENST00000571018 CASP8AP2Q9UKL3 1982 aa15.29■□□□□ 0.04
TVP23B-204ENST00000571018 SIPA1L1O43166 1804 aa15.29■□□□□ 0.04
TVP23B-204ENST00000571018 BTBD19C9JJ37 291 aa15.29■□□□□ 0.04
TVP23B-204ENST00000571018 EHD4Q9H223 541 aa15.29■□□□□ 0.04
TVP23B-204ENST00000571018 ARMT1Q9H993 441 aa15.29■□□□□ 0.04
TVP23B-204ENST00000571018 FKTNO75072 461 aa15.28■□□□□ 0.04
TVP23B-204ENST00000571018 MBD4O95243 580 aa15.28■□□□□ 0.04
TVP23B-204ENST00000571018 MOGSQ13724 837 aa15.28■□□□□ 0.04
TVP23B-204ENST00000571018 TAF1CQ15572 869 aaPredicted RBP15.28■□□□□ 0.04
TVP23B-204ENST00000571018 SLC4A8Q2Y0W8 1093 aa15.28■□□□□ 0.04
TVP23B-204ENST00000571018 ANKRD23Q86SG2 305 aa15.28■□□□□ 0.04
TVP23B-204ENST00000571018 SDR42E1Q8WUS8 393 aa15.28■□□□□ 0.04
TVP23B-204ENST00000571018 TRIM34Q9BYJ4 488 aa15.28■□□□□ 0.04
TVP23B-204ENST00000571018 ZFYVE28Q9HCC9 887 aa15.28■□□□□ 0.04
TVP23B-204ENST00000571018 DCP1AQ9NPI6 582 aaPredicted RBP15.28■□□□□ 0.04
TVP23B-204ENST00000571018 STAP2Q9UGK3 403 aa15.28■□□□□ 0.04
TVP23B-204ENST00000571018 SERPINB13Q9UIV8 391 aa15.28■□□□□ 0.04
TVP23B-204ENST00000571018 DOCK1Q14185 1865 aa15.28■□□□□ 0.04
TVP23B-204ENST00000571018 A0A0G2JLL6 359 aaPredicted RBP15.27■□□□□ 0.04
TVP23B-204ENST00000571018 ZFYP08048 801 aaPredicted RBP15.27■□□□□ 0.04
TVP23B-204ENST00000571018 PLCD1P51178 756 aa15.27■□□□□ 0.04
TVP23B-204ENST00000571018 DGKZQ13574 1117 aa15.27■□□□□ 0.04
TVP23B-204ENST00000571018 TATDN1Q6P1N9 297 aa15.27■□□□□ 0.04
TVP23B-204ENST00000571018 PRRT2Q7Z6L0 340 aaPredicted RBP15.27■□□□□ 0.04
TVP23B-204ENST00000571018 CCDC84Q86UT8 332 aaPredicted RBP15.27■□□□□ 0.04
TVP23B-204ENST00000571018 TBC1D2Q9BYX2 928 aa15.27■□□□□ 0.04
TVP23B-204ENST00000571018 PUS7LQ9H0K6 701 aaKnown RBP15.27■□□□□ 0.04
TVP23B-204ENST00000571018 ATP8A2Q9NTI2 1148 aa15.27■□□□□ 0.04
TVP23B-204ENST00000571018 GINM1Q9NU53 330 aa15.27■□□□□ 0.04
TVP23B-204ENST00000571018 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.27■□□□□ 0.04
TVP23B-204ENST00000571018 USP17L5A8MUK1 530 aa15.26■□□□□ 0.03
TVP23B-204ENST00000571018 RNF113AO15541 343 aaKnown RBP15.26■□□□□ 0.03
TVP23B-204ENST00000571018 PRKAB2O43741 272 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms