RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 TTC41PQ6P2S7 1318 aa16.24■□□□□ 0.19
RPAIN-207ENST00000570883 LOC285556D6RIA3 1793 aa16.24■□□□□ 0.19
RPAIN-207ENST00000570883 MX1P20591 662 aa16.24■□□□□ 0.19
RPAIN-207ENST00000570883 PPATQ06203 517 aa16.24■□□□□ 0.19
RPAIN-207ENST00000570883 RRP1BQ14684 758 aaKnown RBP16.24■□□□□ 0.19
RPAIN-207ENST00000570883 ANKRD45Q5TZF3 282 aa16.24■□□□□ 0.19
RPAIN-207ENST00000570883 SMC5Q8IY18 1101 aa16.24■□□□□ 0.19
RPAIN-207ENST00000570883 SCYL3Q8IZE3 742 aa16.24■□□□□ 0.19
RPAIN-207ENST00000570883 LCORLQ8N3X6 602 aa16.24■□□□□ 0.19
RPAIN-207ENST00000570883 CFHR5Q9BXR6 569 aa16.24■□□□□ 0.19
RPAIN-207ENST00000570883 DHX36Q9H2U1 1008 aaKnown RBP16.24■□□□□ 0.19
RPAIN-207ENST00000570883 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.24■□□□□ 0.192e-7■■□□□ 11.6
RPAIN-207ENST00000570883 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.24■□□□□ 0.19
RPAIN-207ENST00000570883 HTTP42858 3142 aa16.24■□□□□ 0.19
RPAIN-207ENST00000570883 CCL15-CCL14A0A0B4J2E2 113 aa16.23■□□□□ 0.19
RPAIN-207ENST00000570883 GTF2A2P52657 109 aa16.23■□□□□ 0.19
RPAIN-207ENST00000570883 CCL15Q16663 113 aa16.23■□□□□ 0.19
RPAIN-207ENST00000570883 SLC4A8Q2Y0W8 1093 aa16.23■□□□□ 0.19
RPAIN-207ENST00000570883 METTL16Q86W50 562 aaKnown RBP16.23■□□□□ 0.19
RPAIN-207ENST00000570883 TNS4Q8IZW8 715 aa16.23■□□□□ 0.19
RPAIN-207ENST00000570883 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.23■□□□□ 0.19
RPAIN-207ENST00000570883 PI4KBQ9UBF8 816 aa16.23■□□□□ 0.19
RPAIN-207ENST00000570883 KCNH4Q9UQ05 1017 aa16.23■□□□□ 0.19
RPAIN-207ENST00000570883 CTNND1O60716 968 aaKnown RBP16.22■□□□□ 0.19
RPAIN-207ENST00000570883 MBD4O95243 580 aa16.22■□□□□ 0.19
RPAIN-207ENST00000570883 PTPRAP18433 802 aa16.22■□□□□ 0.19
RPAIN-207ENST00000570883 USP5P45974 858 aa16.22■□□□□ 0.19
RPAIN-207ENST00000570883 SNAPC2Q13487 334 aa16.22■□□□□ 0.19
RPAIN-207ENST00000570883 UBE3CQ15386 1083 aa16.22■□□□□ 0.19
RPAIN-207ENST00000570883 FAM43AQ8N2R8 423 aa16.22■□□□□ 0.19
RPAIN-207ENST00000570883 KBTBD3Q8NAB2 608 aa16.22■□□□□ 0.19
RPAIN-207ENST00000570883 RWDD1Q9H446 243 aaPredicted RBP16.22■□□□□ 0.19
RPAIN-207ENST00000570883 ARMT1Q9H993 441 aa16.22■□□□□ 0.19
RPAIN-207ENST00000570883 HERC5Q9UII4 1024 aaKnown RBP16.22■□□□□ 0.19
RPAIN-207ENST00000570883 ZSWIM8A7E2V4 1837 aa16.22■□□□□ 0.19
RPAIN-207ENST00000570883 GLRX3O76003 335 aaKnown RBP16.21■□□□□ 0.19
RPAIN-207ENST00000570883 ALDH1A1P00352 501 aa16.21■□□□□ 0.19
RPAIN-207ENST00000570883 EVX2Q03828 476 aa16.21■□□□□ 0.19
RPAIN-207ENST00000570883 MOGSQ13724 837 aa16.21■□□□□ 0.19
RPAIN-207ENST00000570883 SHROOM1Q2M3G4 852 aaPredicted RBP16.21■□□□□ 0.19
RPAIN-207ENST00000570883 CCDC84Q86UT8 332 aaPredicted RBP16.21■□□□□ 0.19
RPAIN-207ENST00000570883 SDR42E1Q8WUS8 393 aa16.21■□□□□ 0.19
RPAIN-207ENST00000570883 CRNKL1Q9BZJ0 848 aaKnown RBP16.21■□□□□ 0.19
RPAIN-207ENST00000570883 PICK1Q9NRD5 415 aa16.21■□□□□ 0.19
RPAIN-207ENST00000570883 BTBD19C9JJ37 291 aa16.2■□□□□ 0.18
RPAIN-207ENST00000570883 ERC2O15083 957 aa16.2■□□□□ 0.18
RPAIN-207ENST00000570883 PRKAB2O43741 272 aa16.2■□□□□ 0.18
RPAIN-207ENST00000570883 CETPP11597 493 aa16.2■□□□□ 0.18
RPAIN-207ENST00000570883 JAG1P78504 1218 aa16.2■□□□□ 0.18
RPAIN-207ENST00000570883 CRHR2Q13324 411 aa16.2■□□□□ 0.18
RPAIN-207ENST00000570883 LNPKQ9C0E8 428 aa16.2■□□□□ 0.18
RPAIN-207ENST00000570883 PUS7LQ9H0K6 701 aaKnown RBP16.2■□□□□ 0.18
RPAIN-207ENST00000570883 STAP2Q9UGK3 403 aa16.2■□□□□ 0.18
RPAIN-207ENST00000570883 GPR25O00155 361 aa16.19■□□□□ 0.18
RPAIN-207ENST00000570883 HLA-DOAP06340 250 aa16.19■□□□□ 0.18
RPAIN-207ENST00000570883 CAP2P40123 477 aa16.19■□□□□ 0.18
RPAIN-207ENST00000570883 NOM1Q5C9Z4 860 aaKnown RBP16.19■□□□□ 0.18
RPAIN-207ENST00000570883 B4GALNT3Q6L9W6 998 aa16.19■□□□□ 0.18
RPAIN-207ENST00000570883 ZSCAN25Q6NSZ9 544 aa16.19■□□□□ 0.18
RPAIN-207ENST00000570883 ZNF296Q8WUU4 475 aaPredicted RBP16.19■□□□□ 0.18
RPAIN-207ENST00000570883 DCP1AQ9NPI6 582 aaPredicted RBP16.19■□□□□ 0.18
RPAIN-207ENST00000570883 ZBTB47Q9UFB7 747 aaPredicted RBP16.19■□□□□ 0.18
RPAIN-207ENST00000570883 AFG3L2Q9Y4W6 797 aa16.19■□□□□ 0.18
RPAIN-207ENST00000570883 ZHX2Q9Y6X8 837 aa16.19■□□□□ 0.18
RPAIN-207ENST00000570883 PLCD1P51178 756 aa16.18■□□□□ 0.18
RPAIN-207ENST00000570883 PDE1AP54750 535 aa16.18■□□□□ 0.18
RPAIN-207ENST00000570883 NUCB1Q02818 461 aa16.18■□□□□ 0.18
RPAIN-207ENST00000570883 OTUD7BQ6GQQ9 843 aa16.18■□□□□ 0.18
RPAIN-207ENST00000570883 FOXP4Q8IVH2 680 aaPredicted RBP16.18■□□□□ 0.18
RPAIN-207ENST00000570883 CRACR2BQ8N4Y2 399 aaPredicted RBP16.18■□□□□ 0.18
RPAIN-207ENST00000570883 EHD4Q9H223 541 aa16.18■□□□□ 0.18
RPAIN-207ENST00000570883 MGAMO43451 1857 aa16.17■□□□□ 0.18
RPAIN-207ENST00000570883 A0A0G2JLL6 359 aaPredicted RBP16.17■□□□□ 0.18
RPAIN-207ENST00000570883 CXCL11O14625 94 aa16.17■□□□□ 0.18
RPAIN-207ENST00000570883 GDF11O95390 407 aa16.17■□□□□ 0.18
RPAIN-207ENST00000570883 CYP2D6P10635 497 aa16.17■□□□□ 0.18
RPAIN-207ENST00000570883 PRRT2Q7Z6L0 340 aaPredicted RBP16.17■□□□□ 0.18
RPAIN-207ENST00000570883 APPBP2Q92624 585 aa16.17■□□□□ 0.18
RPAIN-207ENST00000570883 OSBP2Q969R2 916 aa16.17■□□□□ 0.18
RPAIN-207ENST00000570883 MCM9Q9NXL9 1143 aa16.17■□□□□ 0.18
RPAIN-207ENST00000570883 SERPINB13Q9UIV8 391 aa16.17■□□□□ 0.18
RPAIN-207ENST00000570883 CENPFP49454 3210 aa16.17■□□□□ 0.18
RPAIN-207ENST00000570883 TRIM75PA6NK02 468 aa16.16■□□□□ 0.18
RPAIN-207ENST00000570883 SMIM22K7EJ46 135 aa16.16■□□□□ 0.18
RPAIN-207ENST00000570883 RNF113AO15541 343 aaKnown RBP16.16■□□□□ 0.18
RPAIN-207ENST00000570883 TAF1CQ15572 869 aaPredicted RBP16.16■□□□□ 0.18
RPAIN-207ENST00000570883 GPAT2Q6NUI2 795 aa16.16■□□□□ 0.18
RPAIN-207ENST00000570883 TATDN1Q6P1N9 297 aa16.16■□□□□ 0.18
RPAIN-207ENST00000570883 TTC6Q86TZ1 520 aa16.16■□□□□ 0.18
RPAIN-207ENST00000570883 CHD1LQ86WJ1 897 aa16.16■□□□□ 0.18
RPAIN-207ENST00000570883 TRIM34Q9BYJ4 488 aa16.16■□□□□ 0.18
RPAIN-207ENST00000570883 ZCCHC17Q9NP64 241 aaKnown RBP16.16■□□□□ 0.18
RPAIN-207ENST00000570883 GREB1LQ9C091 1923 aaPredicted RBP16.15■□□□□ 0.18
RPAIN-207ENST00000570883 M0R2C6 588 aa16.15■□□□□ 0.18
RPAIN-207ENST00000570883 POLR3DP05423 398 aaPredicted RBP16.15■□□□□ 0.18
RPAIN-207ENST00000570883 ZFYP08048 801 aaPredicted RBP16.15■□□□□ 0.18
RPAIN-207ENST00000570883 SHMT1P34896 483 aa16.15■□□□□ 0.18
RPAIN-207ENST00000570883 GABPAQ06546 454 aa16.15■□□□□ 0.18
RPAIN-207ENST00000570883 ANKRD23Q86SG2 305 aa16.15■□□□□ 0.18
RPAIN-207ENST00000570883 STRBPQ96SI9 672 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms