RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 DDNO94850 711 aaPredicted RBP7.84□□□□□ -1.15
CTDNEP1-204ENST00000570484 PICALMQ13492 652 aa7.84□□□□□ -1.15
CTDNEP1-204ENST00000570484 TNFAIP1Q13829 316 aa7.84□□□□□ -1.15
CTDNEP1-204ENST00000570484 IMMTQ16891 758 aaKnown RBP7.84□□□□□ -1.15
CTDNEP1-204ENST00000570484 SH3RF3Q8TEJ3 882 aaPredicted RBP7.84□□□□□ -1.15
CTDNEP1-204ENST00000570484 ZNF384Q8TF68 577 aa7.84□□□□□ -1.15
CTDNEP1-204ENST00000570484 STRBPQ96SI9 672 aaKnown RBP7.84□□□□□ -1.15
CTDNEP1-204ENST00000570484 GMLQ99445 158 aa7.84□□□□□ -1.15
CTDNEP1-204ENST00000570484 IL25Q9H293 177 aa7.84□□□□□ -1.15
CTDNEP1-204ENST00000570484 VEZTQ9HBM0 779 aa7.84□□□□□ -1.15
CTDNEP1-204ENST00000570484 NPDC1Q9NQX5 325 aaPredicted RBP7.84□□□□□ -1.15
CTDNEP1-204ENST00000570484 ATP8A2Q9NTI2 1148 aa7.84□□□□□ -1.15
CTDNEP1-204ENST00000570484 USP40Q9NVE5 1235 aa7.84□□□□□ -1.15
CTDNEP1-204ENST00000570484 GPRC5DQ9NZD1 345 aa7.84□□□□□ -1.15
CTDNEP1-204ENST00000570484 CNOT7Q9UIV1 285 aaKnown RBP7.84□□□□□ -1.15
CTDNEP1-204ENST00000570484 HACL1Q9UJ83 578 aa7.84□□□□□ -1.15
CTDNEP1-204ENST00000570484 RBM8AQ9Y5S9 174 aaKnown RBP7.84□□□□□ -1.15
CTDNEP1-204ENST00000570484 AKAP11Q9UKA4 1901 aa7.84□□□□□ -1.16
CTDNEP1-204ENST00000570484 FLT1P17948 1338 aa7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 CLRN2A0PK11 232 aa7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 GLTPD2A6NH11 291 aa7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 HLA-DOAP06340 250 aa7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 SLC3A2P08195 630 aaKnown RBP7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 HSPD1P10809 573 aaKnown RBP7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 TNNI2P48788 182 aa7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 ZNF280AP59817 542 aaPredicted RBP7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 PPP4CP60510 307 aa7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 TBC1D10BQ4KMP7 808 aaPredicted RBP7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 VPS53Q5VIR6 699 aa7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 GIMAP6Q6P9H5 292 aa7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 MAPKAPK5Q8IW41 473 aa7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 ZSCAN29Q8IWY8 852 aaPredicted RBP7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 TGFBRAP1Q8WUH2 860 aa7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 SDR42E1Q8WUS8 393 aa7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 ZDHHC16Q969W1 377 aa7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 MRIQ9BWK5 157 aa7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 TRIM34Q9BYJ4 488 aa7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 C22orf23Q9BZE7 217 aa7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 LSG1Q9H089 658 aaKnown RBP7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 ADARB2Q9NS39 739 aaKnown RBP7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 MCM9Q9NXL9 1143 aa7.83□□□□□ -1.16
CTDNEP1-204ENST00000570484 PATL2C9JE40 543 aaKnown RBP7.82□□□□□ -1.16
CTDNEP1-204ENST00000570484 ZNF213O14771 459 aa7.82□□□□□ -1.16
CTDNEP1-204ENST00000570484 PRKAB2O43741 272 aa7.82□□□□□ -1.16
CTDNEP1-204ENST00000570484 POLR3DP05423 398 aaPredicted RBP7.82□□□□□ -1.16
CTDNEP1-204ENST00000570484 PTH1RQ03431 593 aa7.82□□□□□ -1.16
CTDNEP1-204ENST00000570484 TRDNQ13061 729 aa7.82□□□□□ -1.16
CTDNEP1-204ENST00000570484 KRT32Q14532 448 aa7.82□□□□□ -1.16
CTDNEP1-204ENST00000570484 APOBEC3HQ6NTF7 200 aaKnown RBP7.82□□□□□ -1.16
CTDNEP1-204ENST00000570484 CDC42EP5Q6NZY7 148 aa7.82□□□□□ -1.16
CTDNEP1-204ENST00000570484 SAMD7Q7Z3H4 446 aa7.82□□□□□ -1.16
CTDNEP1-204ENST00000570484 RALYLQ86SE5 291 aaKnown RBP7.82□□□□□ -1.16
CTDNEP1-204ENST00000570484 APOBEC3FQ8IUX4 373 aaKnown RBP7.82□□□□□ -1.16
CTDNEP1-204ENST00000570484 GPIHBP1Q8IV16 184 aa7.82□□□□□ -1.16
CTDNEP1-204ENST00000570484 MTMR14Q8NCE2 650 aa7.82□□□□□ -1.16
CTDNEP1-204ENST00000570484 TDRD3Q9H7E2 651 aaKnown RBP7.82□□□□□ -1.16
CTDNEP1-204ENST00000570484 EPB41L4AQ9HCS5 686 aaPredicted RBP7.82□□□□□ -1.16
CTDNEP1-204ENST00000570484 DCP1AQ9NPI6 582 aaPredicted RBP7.82□□□□□ -1.16
CTDNEP1-204ENST00000570484 TOMM22Q9NS69 142 aa7.82□□□□□ -1.16
CTDNEP1-204ENST00000570484 ZNF70Q9UC06 446 aaPredicted RBP7.82□□□□□ -1.16
CTDNEP1-204ENST00000570484 SCN9AQ15858 1988 aa7.82□□□□□ -1.16
CTDNEP1-204ENST00000570484 PSME4Q14997 1843 aa7.82□□□□□ -1.16
CTDNEP1-204ENST00000570484 ZNF646O15015 1829 aaPredicted RBP7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 SHTN1A0MZ66 631 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 GSG1L2A8MUP6 293 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 MINDY4BA8MYZ0 360 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 TCP10L2B9ZVM9 353 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 WNT10BO00744 389 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 ENTPD3O75355 529 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 EPHX2P34913 555 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 EPS15P42566 896 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 CACNB3P54284 484 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 RHBDL3P58872 404 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 HAND2P61296 217 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 TCP10Q12799 353 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 PTGDRQ13258 359 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 SLC4A8Q2Y0W8 1093 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 EAPPQ56P03 285 aaPredicted RBP7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 TTC6Q86TZ1 520 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 IFNL3Q8IZI9 196 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 CRACR2BQ8N4Y2 399 aaPredicted RBP7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 ZNF454Q8N9F8 522 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 TRPM4Q8TD43 1214 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 MAP4K1Q92918 833 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 TBC1D32Q96NH3 1257 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 USP26Q9BXU7 913 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 OSBPL5Q9H0X9 879 aaPredicted RBP7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 DHX36Q9H2U1 1008 aaKnown RBP7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 RNF41Q9H4P4 317 aaPredicted RBP7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 ZNF287Q9HBT7 754 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 GGA3Q9NZ52 723 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 SAP30BPQ9UHR5 308 aaKnown RBP7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 ADAMTSL1Q8N6G6 1762 aa7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 COL2A1P02458 1487 aaPredicted RBP7.81□□□□□ -1.16
CTDNEP1-204ENST00000570484 MYH7P12883 1935 aa7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 SLC27A2O14975 620 aa7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 WDHD1O75717 1129 aaPredicted RBP7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 FGAP02671 866 aa7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 PSMA5P28066 241 aa7.8□□□□□ -1.16
CTDNEP1-204ENST00000570484 HSPA4P34932 840 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms