RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 HOXA10P31260 410 aaPredicted RBP5.54□□□□□ -1.52
UBR1-211ENST00000569971 CAMK2GQ13555 558 aaPredicted RBP5.54□□□□□ -1.52
UBR1-211ENST00000569971 SGO2Q562F6 1265 aa5.54□□□□□ -1.52
UBR1-211ENST00000569971 RPS26P11Q5JNZ5 115 aaPredicted RBP5.54□□□□□ -1.52
UBR1-211ENST00000569971 SOGA3Q5TF21 947 aa5.54□□□□□ -1.52
UBR1-211ENST00000569971 TTBK2Q6IQ55 1244 aa5.54□□□□□ -1.52
UBR1-211ENST00000569971 POU5F2Q8N7G0 328 aa5.54□□□□□ -1.52
UBR1-211ENST00000569971 GOLM1Q8NBJ4 401 aa5.54□□□□□ -1.52
UBR1-211ENST00000569971 AGBL5Q8NDL9 886 aa5.54□□□□□ -1.52
UBR1-211ENST00000569971 NT5C1AQ9BXI3 368 aa5.54□□□□□ -1.52
UBR1-211ENST00000569971 ZSWIM4Q9H7M6 989 aa5.54□□□□□ -1.52
UBR1-211ENST00000569971 KCNQ5Q9NR82 932 aa5.54□□□□□ -1.52
UBR1-211ENST00000569971 BSDC1Q9NW68 430 aaPredicted RBP5.54□□□□□ -1.52
UBR1-211ENST00000569971 UBP1Q9NZI7 540 aa5.54□□□□□ -1.52
UBR1-211ENST00000569971 GPN3Q9UHW5 284 aaPredicted RBP5.54□□□□□ -1.52
UBR1-211ENST00000569971 LOC100289279A0A1B0GTE1 492 aa5.53□□□□□ -1.52
UBR1-211ENST00000569971 FAM95CA0A1B0GW59 222 aa5.53□□□□□ -1.52
UBR1-211ENST00000569971 SSBP05455 408 aaKnown RBP eCLIP5.53□□□□□ -1.52
UBR1-211ENST00000569971 ITGB5P18084 799 aa5.53□□□□□ -1.52
UBR1-211ENST00000569971 LMNB2Q03252 620 aa5.53□□□□□ -1.52
UBR1-211ENST00000569971 EXOSC6Q5RKV6 272 aaKnown RBP5.53□□□□□ -1.52
UBR1-211ENST00000569971 SNAP47Q5SQN1 464 aa5.53□□□□□ -1.52
UBR1-211ENST00000569971 PCNX4Q63HM2 1172 aa5.53□□□□□ -1.52
UBR1-211ENST00000569971 AGMOQ6ZNB7 445 aa5.53□□□□□ -1.52
UBR1-211ENST00000569971 VN1R5Q7Z5H4 357 aa5.53□□□□□ -1.52
UBR1-211ENST00000569971 NOP9Q86U38 636 aaKnown RBP5.53□□□□□ -1.52
UBR1-211ENST00000569971 PIF1Q9H611 641 aa5.53□□□□□ -1.52
UBR1-211ENST00000569971 TMEM39AQ9NV64 488 aa5.53□□□□□ -1.52
UBR1-211ENST00000569971 SUPT16HQ9Y5B9 1047 aaKnown RBP5.53□□□□□ -1.52
UBR1-211ENST00000569971 MRVI1Q9Y6F6 885 aa5.53□□□□□ -1.52
UBR1-211ENST00000569971 DCAF1Q9Y4B6 1507 aa5.53□□□□□ -1.52
UBR1-211ENST00000569971 CYP11A1P05108 521 aa5.52□□□□□ -1.53
UBR1-211ENST00000569971 RXRBP28702 533 aa5.52□□□□□ -1.53
UBR1-211ENST00000569971 ETFBP38117 255 aa5.52□□□□□ -1.53
UBR1-211ENST00000569971 CRKP46108 304 aa5.52□□□□□ -1.53
UBR1-211ENST00000569971 CYP27A1Q02318 531 aa5.52□□□□□ -1.53
UBR1-211ENST00000569971 ZNF423Q2M1K9 1284 aa5.52□□□□□ -1.53
UBR1-211ENST00000569971 RASIP1Q5U651 963 aa5.52□□□□□ -1.53
UBR1-211ENST00000569971 ZAR1Q86SH2 424 aa5.52□□□□□ -1.53
UBR1-211ENST00000569971 C12orf50Q8NA57 414 aaPredicted RBP5.52□□□□□ -1.53
UBR1-211ENST00000569971 JARID2Q92833 1246 aaPredicted RBP5.52□□□□□ -1.53
UBR1-211ENST00000569971 PUS7Q96PZ0 661 aaKnown RBP5.52□□□□□ -1.53
UBR1-211ENST00000569971 KRTAP4-7Q9BYR0 210 aa5.52□□□□□ -1.53
UBR1-211ENST00000569971 CLEC4MQ9H2X3 399 aaPredicted RBP5.52□□□□□ -1.53
UBR1-211ENST00000569971 PCDHB5Q9Y5E4 795 aa5.52□□□□□ -1.53
UBR1-211ENST00000569971 SOX1O00570 391 aaPredicted RBP5.51□□□□□ -1.53
UBR1-211ENST00000569971 TLR3O15455 904 aaKnown RBP5.51□□□□□ -1.53
UBR1-211ENST00000569971 F13A1P00488 732 aa5.51□□□□□ -1.53
UBR1-211ENST00000569971 BMP6P22004 513 aa5.51□□□□□ -1.53
UBR1-211ENST00000569971 SOX9P48436 509 aa5.51□□□□□ -1.53
UBR1-211ENST00000569971 RPS26P62854 115 aaKnown RBP5.51□□□□□ -1.53
UBR1-211ENST00000569971 JAG1P78504 1218 aa5.51□□□□□ -1.53
UBR1-211ENST00000569971 PPP2R3AQ06190 1150 aa5.51□□□□□ -1.53
UBR1-211ENST00000569971 PCDH1Q08174 1060 aa5.51□□□□□ -1.53
UBR1-211ENST00000569971 APOBRQ0VD83 1088 aa5.51□□□□□ -1.53
UBR1-211ENST00000569971 BNC2Q6ZN30 1099 aaPredicted RBP5.51□□□□□ -1.53
UBR1-211ENST00000569971 FBXO27Q8NI29 283 aa5.51□□□□□ -1.53
UBR1-211ENST00000569971 STK35Q8TDR2 534 aa5.51□□□□□ -1.53
UBR1-211ENST00000569971 NKD1Q969G9 470 aa5.51□□□□□ -1.53
UBR1-211ENST00000569971 OSBPL2Q9H1P3 480 aa5.51□□□□□ -1.53
UBR1-211ENST00000569971 ZNF408Q9H9D4 720 aa5.51□□□□□ -1.53
UBR1-211ENST00000569971 CYP26A1O43174 497 aa5.5□□□□□ -1.53
UBR1-211ENST00000569971 ESRRAP11474 423 aaPredicted RBP5.5□□□□□ -1.53
UBR1-211ENST00000569971 USP11P51784 963 aa5.5□□□□□ -1.53
UBR1-211ENST00000569971 GSTM4Q03013 218 aa5.5□□□□□ -1.53
UBR1-211ENST00000569971 BMS1Q14692 1282 aaKnown RBP5.5□□□□□ -1.53
UBR1-211ENST00000569971 SEZ6Q53EL9 994 aa5.5□□□□□ -1.53
UBR1-211ENST00000569971 OGFOD2Q6N063 350 aa5.5□□□□□ -1.53
UBR1-211ENST00000569971 NFXL1Q6ZNB6 911 aa5.5□□□□□ -1.53
UBR1-211ENST00000569971 FAM196AQ6ZSG2 479 aa5.5□□□□□ -1.53
UBR1-211ENST00000569971 CKAP2LQ8IYA6 745 aa5.5□□□□□ -1.53
UBR1-211ENST00000569971 FBXL6Q8N531 539 aa5.5□□□□□ -1.53
UBR1-211ENST00000569971 C2CD4AQ8NCU7 369 aaPredicted RBP5.5□□□□□ -1.53
UBR1-211ENST00000569971 CPLX3Q8WVH0 158 aa5.5□□□□□ -1.53
UBR1-211ENST00000569971 ANAPC16Q96DE5 110 aa5.5□□□□□ -1.53
UBR1-211ENST00000569971 USP26Q9BXU7 913 aa5.5□□□□□ -1.53
UBR1-211ENST00000569971 NRSN2Q9GZP1 204 aa5.5□□□□□ -1.53
UBR1-211ENST00000569971 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.49□□□□□ -1.53
UBR1-211ENST00000569971 TLDC2A0PJX2 215 aa5.49□□□□□ -1.53
UBR1-211ENST00000569971 B3GALT4O96024 378 aa5.49□□□□□ -1.53
UBR1-211ENST00000569971 LMNB1P20700 586 aa5.49□□□□□ -1.53
UBR1-211ENST00000569971 NME2P22392 152 aa5.49□□□□□ -1.53
UBR1-211ENST00000569971 ARNTP27540 789 aa5.49□□□□□ -1.53
UBR1-211ENST00000569971 CANXP27824 592 aaKnown RBP5.49□□□□□ -1.53
UBR1-211ENST00000569971 SOX4Q06945 474 aaPredicted RBP5.49□□□□□ -1.53
UBR1-211ENST00000569971 COL9A2Q14055 689 aaPredicted RBP5.49□□□□□ -1.53
UBR1-211ENST00000569971 MAP7Q14244 749 aa5.49□□□□□ -1.53
UBR1-211ENST00000569971 NFKBIBQ15653 356 aa5.49□□□□□ -1.53
UBR1-211ENST00000569971 ANKS3Q6ZW76 656 aa5.49□□□□□ -1.53
UBR1-211ENST00000569971 SLITRK4Q8IW52 837 aa5.49□□□□□ -1.53
UBR1-211ENST00000569971 TP53INP2Q8IXH6 220 aa5.49□□□□□ -1.53
UBR1-211ENST00000569971 GRIN3AQ8TCU5 1115 aa5.49□□□□□ -1.53
UBR1-211ENST00000569971 TBC1D32Q96NH3 1257 aa5.49□□□□□ -1.53
UBR1-211ENST00000569971 MIR1-1HGQ9H1L0 117 aa5.49□□□□□ -1.53
UBR1-211ENST00000569971 SAMM50Q9Y512 469 aa5.49□□□□□ -1.53
UBR1-211ENST00000569971 SYNGAP1Q96PV0 1343 aa5.48□□□□□ -1.53
UBR1-211ENST00000569971 ROBO2Q9HCK4 1378 aa5.48□□□□□ -1.53
UBR1-211ENST00000569971 FAM221AA4D161 298 aa5.48□□□□□ -1.53
UBR1-211ENST00000569971 ADH5P11766 374 aa5.48□□□□□ -1.53
UBR1-211ENST00000569971 SEPT6Q14141 434 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms