RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 FAM43AQ8N2R8 423 aa15.81■□□□□ 0.12
CNOT1-220ENST00000569916 MCOLN1Q9GZU1 580 aa15.81■□□□□ 0.12
CNOT1-220ENST00000569916 DHX36Q9H2U1 1008 aaKnown RBP15.81■□□□□ 0.12
CNOT1-220ENST00000569916 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.81■□□□□ 0.12
CNOT1-220ENST00000569916 ZNF532Q9HCE3 1301 aa15.81■□□□□ 0.12
CNOT1-220ENST00000569916 HERC5Q9UII4 1024 aaKnown RBP15.81■□□□□ 0.12
CNOT1-220ENST00000569916 PTPRAP18433 802 aa15.8■□□□□ 0.12
CNOT1-220ENST00000569916 ABHD8Q96I13 439 aa15.8■□□□□ 0.12
CNOT1-220ENST00000569916 DNAJC18Q9H819 358 aa15.8■□□□□ 0.12
CNOT1-220ENST00000569916 PICK1Q9NRD5 415 aa15.8■□□□□ 0.12
CNOT1-220ENST00000569916 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.8■□□□□ 0.12
CNOT1-220ENST00000569916 PI4KBQ9UBF8 816 aa15.8■□□□□ 0.12
CNOT1-220ENST00000569916 SAP30BPQ9UHR5 308 aaKnown RBP15.8■□□□□ 0.12
CNOT1-220ENST00000569916 PALD1Q9ULE6 856 aa15.8■□□□□ 0.12
CNOT1-220ENST00000569916 BAZ2AQ9UIF9 1905 aaKnown RBP15.79■□□□□ 0.12
CNOT1-220ENST00000569916 MAGEB6P1A0A0J9YX57 407 aa15.79■□□□□ 0.12
CNOT1-220ENST00000569916 BTBD19C9JJ37 291 aa15.79■□□□□ 0.12
CNOT1-220ENST00000569916 FKTNO75072 461 aa15.79■□□□□ 0.12
CNOT1-220ENST00000569916 ADD2P35612 726 aa15.79■□□□□ 0.12
CNOT1-220ENST00000569916 USP5P45974 858 aa15.79■□□□□ 0.12
CNOT1-220ENST00000569916 HDAC1Q13547 482 aaPredicted RBP15.79■□□□□ 0.12
CNOT1-220ENST00000569916 AAMPQ13685 434 aa15.79■□□□□ 0.12
CNOT1-220ENST00000569916 RRP1BQ14684 758 aaKnown RBP15.79■□□□□ 0.12
CNOT1-220ENST00000569916 TAF1CQ15572 869 aaPredicted RBP15.79■□□□□ 0.12
CNOT1-220ENST00000569916 TSHZ3Q63HK5 1081 aa15.79■□□□□ 0.12
CNOT1-220ENST00000569916 CTU1Q7Z7A3 348 aaKnown RBP15.79■□□□□ 0.12
CNOT1-220ENST00000569916 METTL16Q86W50 562 aaKnown RBP15.79■□□□□ 0.12
CNOT1-220ENST00000569916 ZHX2Q9Y6X8 837 aa15.79■□□□□ 0.12
CNOT1-220ENST00000569916 ZSWIM8A7E2V4 1837 aa15.78■□□□□ 0.12
CNOT1-220ENST00000569916 CXCL11O14625 94 aa15.78■□□□□ 0.12
CNOT1-220ENST00000569916 CAPN15O75808 1086 aa15.78■□□□□ 0.12
CNOT1-220ENST00000569916 CHGBP05060 677 aa15.78■□□□□ 0.12
CNOT1-220ENST00000569916 HLA-DOAP06340 250 aa15.78■□□□□ 0.12
CNOT1-220ENST00000569916 MOGSQ13724 837 aa15.78■□□□□ 0.12
CNOT1-220ENST00000569916 SLC4A8Q2Y0W8 1093 aa15.78■□□□□ 0.12
CNOT1-220ENST00000569916 SLFNL1Q499Z3 407 aa15.78■□□□□ 0.12
CNOT1-220ENST00000569916 CCDC84Q86UT8 332 aaPredicted RBP15.78■□□□□ 0.12
CNOT1-220ENST00000569916 GPATCH3Q96I76 525 aa15.78■□□□□ 0.12
CNOT1-220ENST00000569916 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.78■□□□□ 0.123e-6■□□□□ 9.1
CNOT1-220ENST00000569916 ZCCHC17Q9NP64 241 aaKnown RBP15.78■□□□□ 0.12
CNOT1-220ENST00000569916 AFG3L2Q9Y4W6 797 aa15.78■□□□□ 0.12
CNOT1-220ENST00000569916 MYH8P13535 1937 aa15.78■□□□□ 0.12
CNOT1-220ENST00000569916 TTC41PQ6P2S7 1318 aa15.77■□□□□ 0.12
CNOT1-220ENST00000569916 CAP2P40123 477 aa15.77■□□□□ 0.12
CNOT1-220ENST00000569916 FOXP4Q8IVH2 680 aaPredicted RBP15.77■□□□□ 0.12
CNOT1-220ENST00000569916 LCORLQ8N3X6 602 aa15.77■□□□□ 0.12
CNOT1-220ENST00000569916 EXOC6Q8TAG9 804 aa15.77■□□□□ 0.12
CNOT1-220ENST00000569916 OTUD7AQ8TE49 926 aaPredicted RBP15.77■□□□□ 0.12
CNOT1-220ENST00000569916 SUPT16HQ9Y5B9 1047 aaKnown RBP15.77■□□□□ 0.12
CNOT1-220ENST00000569916 SALL3Q9BXA9 1300 aa15.76■□□□□ 0.11
CNOT1-220ENST00000569916 A0A0G2JLL6 359 aaPredicted RBP15.76■□□□□ 0.11
CNOT1-220ENST00000569916 UBE3CQ15386 1083 aa15.76■□□□□ 0.11
CNOT1-220ENST00000569916 PRRT2Q7Z6L0 340 aaPredicted RBP15.76■□□□□ 0.11
CNOT1-220ENST00000569916 ANKRD23Q86SG2 305 aa15.76■□□□□ 0.11
CNOT1-220ENST00000569916 CRACR2BQ8N4Y2 399 aaPredicted RBP15.76■□□□□ 0.11
CNOT1-220ENST00000569916 GCC1Q96CN9 775 aa15.76■□□□□ 0.11
CNOT1-220ENST00000569916 CRNKL1Q9BZJ0 848 aaKnown RBP15.76■□□□□ 0.11
CNOT1-220ENST00000569916 ZFYVE28Q9HCC9 887 aa15.76■□□□□ 0.11
CNOT1-220ENST00000569916 MBD4O95243 580 aa15.75■□□□□ 0.11
CNOT1-220ENST00000569916 PPP4R3CPQ6ZMV5 832 aa15.75■□□□□ 0.11
CNOT1-220ENST00000569916 KBTBD3Q8NAB2 608 aa15.75■□□□□ 0.11
CNOT1-220ENST00000569916 PI4K2BQ8TCG2 481 aa15.75■□□□□ 0.11
CNOT1-220ENST00000569916 SDR42E1Q8WUS8 393 aa15.75■□□□□ 0.11
CNOT1-220ENST00000569916 TRIM34Q9BYJ4 488 aa15.75■□□□□ 0.11
CNOT1-220ENST00000569916 EHD4Q9H223 541 aa15.75■□□□□ 0.11
CNOT1-220ENST00000569916 ARMT1Q9H993 441 aa15.75■□□□□ 0.11
CNOT1-220ENST00000569916 ADGRA2Q96PE1 1338 aa15.74■□□□□ 0.11
CNOT1-220ENST00000569916 TRIM75PA6NK02 468 aa15.74■□□□□ 0.11
CNOT1-220ENST00000569916 PDHXO00330 501 aa15.74■□□□□ 0.11
CNOT1-220ENST00000569916 TLR2O60603 784 aa15.74■□□□□ 0.11
CNOT1-220ENST00000569916 MX1P20591 662 aa15.74■□□□□ 0.11
CNOT1-220ENST00000569916 JAG1P78504 1218 aa15.74■□□□□ 0.11
CNOT1-220ENST00000569916 SHROOM1Q2M3G4 852 aaPredicted RBP15.74■□□□□ 0.11
CNOT1-220ENST00000569916 ANKRD45Q5TZF3 282 aa15.74■□□□□ 0.11
CNOT1-220ENST00000569916 ZSCAN25Q6NSZ9 544 aa15.74■□□□□ 0.11
CNOT1-220ENST00000569916 GPAT2Q6NUI2 795 aa15.74■□□□□ 0.11
CNOT1-220ENST00000569916 DCP1AQ9NPI6 582 aaPredicted RBP15.74■□□□□ 0.11
CNOT1-220ENST00000569916 SERPINB13Q9UIV8 391 aa15.74■□□□□ 0.11
CNOT1-220ENST00000569916 USP17L5A8MUK1 530 aa15.73■□□□□ 0.11
CNOT1-220ENST00000569916 PLCD1P51178 756 aa15.73■□□□□ 0.11
CNOT1-220ENST00000569916 CAP1Q01518 475 aa15.73■□□□□ 0.11
CNOT1-220ENST00000569916 SP3Q02447 781 aa15.73■□□□□ 0.11
CNOT1-220ENST00000569916 FASTKD5Q7L8L6 764 aaKnown RBP15.73■□□□□ 0.11
CNOT1-220ENST00000569916 TTC6Q86TZ1 520 aa15.73■□□□□ 0.11
CNOT1-220ENST00000569916 CD99L2Q8TCZ2 262 aa15.73■□□□□ 0.11
CNOT1-220ENST00000569916 ERO1AQ96HE7 468 aa15.73■□□□□ 0.11
CNOT1-220ENST00000569916 TBC1D2Q9BYX2 928 aa15.73■□□□□ 0.11
CNOT1-220ENST00000569916 PUS7LQ9H0K6 701 aaKnown RBP15.73■□□□□ 0.11
CNOT1-220ENST00000569916 MGAMO43451 1857 aa15.73■□□□□ 0.11
CNOT1-220ENST00000569916 ERC2O15083 957 aa15.72■□□□□ 0.11
CNOT1-220ENST00000569916 PRKAB2O43741 272 aa15.72■□□□□ 0.11
CNOT1-220ENST00000569916 GLRX3O76003 335 aaKnown RBP15.72■□□□□ 0.11
CNOT1-220ENST00000569916 GDF11O95390 407 aa15.72■□□□□ 0.11
CNOT1-220ENST00000569916 ASNSP08243 561 aa15.72■□□□□ 0.11
CNOT1-220ENST00000569916 EVX2Q03828 476 aa15.72■□□□□ 0.11
CNOT1-220ENST00000569916 PKN2Q16513 984 aaKnown RBP15.72■□□□□ 0.11
CNOT1-220ENST00000569916 TATDN1Q6P1N9 297 aa15.72■□□□□ 0.11
CNOT1-220ENST00000569916 GADL1Q6ZQY3 521 aa15.72■□□□□ 0.11
CNOT1-220ENST00000569916 SMC5Q8IY18 1101 aa15.72■□□□□ 0.11
CNOT1-220ENST00000569916 ZNF280CQ8ND82 737 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms