RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 DNAH12Q6ZR08 3092 aa14.93□□□□□ -0.02
CAPN3-220ENST00000569827 GPR75-ASB3A0A0A6YYF3 556 aa14.93□□□□□ -0.02
CAPN3-220ENST00000569827 ZBTB7BO15156 539 aaPredicted RBP14.93□□□□□ -0.02
CAPN3-220ENST00000569827 TFRCP02786 760 aaKnown RBP14.93□□□□□ -0.02
CAPN3-220ENST00000569827 HMGCS2P54868 508 aa14.93□□□□□ -0.02
CAPN3-220ENST00000569827 RAI14Q9P0K7 980 aa14.93□□□□□ -0.02
CAPN3-220ENST00000569827 SOX1O00570 391 aaPredicted RBP14.92□□□□□ -0.02
CAPN3-220ENST00000569827 MVPQ14764 893 aaKnown RBP14.92□□□□□ -0.02
CAPN3-220ENST00000569827 SPTY2D1Q68D10 685 aaPredicted RBP14.92□□□□□ -0.02
CAPN3-220ENST00000569827 SLF2Q8IX21 1173 aa14.92□□□□□ -0.02
CAPN3-220ENST00000569827 SH3RF3Q8TEJ3 882 aaPredicted RBP14.92□□□□□ -0.02
CAPN3-220ENST00000569827 NSUN4Q96CB9 384 aaKnown RBP14.92□□□□□ -0.02
CAPN3-220ENST00000569827 PAWRQ96IZ0 340 aaKnown RBP14.92□□□□□ -0.02
CAPN3-220ENST00000569827 PRO3102Q9H379 93 aa14.92□□□□□ -0.02
CAPN3-220ENST00000569827 SNRKQ9NRH2 765 aa14.92□□□□□ -0.02
CAPN3-220ENST00000569827 PDS5AQ29RF7 1337 aaKnown RBP14.92□□□□□ -0.02
CAPN3-220ENST00000569827 PNMA6EA0A0J9YXQ4 647 aa14.91□□□□□ -0.02
CAPN3-220ENST00000569827 MCAMP43121 646 aa14.91□□□□□ -0.02
CAPN3-220ENST00000569827 RARSP54136 660 aaKnown RBP14.91□□□□□ -0.02
CAPN3-220ENST00000569827 GORABQ5T7V8 394 aa14.91□□□□□ -0.02
CAPN3-220ENST00000569827 TEX11Q8IYF3 940 aa14.91□□□□□ -0.02
CAPN3-220ENST00000569827 SPATA5Q8NB90 893 aa14.91□□□□□ -0.02
CAPN3-220ENST00000569827 COA7Q96BR5 231 aa14.91□□□□□ -0.02
CAPN3-220ENST00000569827 FAM163AQ96GL9 167 aaPredicted RBP14.91□□□□□ -0.02
CAPN3-220ENST00000569827 OSBPL5Q9H0X9 879 aaPredicted RBP14.91□□□□□ -0.02
CAPN3-220ENST00000569827 SLC45A1Q9Y2W3 748 aa14.91□□□□□ -0.02
CAPN3-220ENST00000569827 MYH8P13535 1937 aa14.9□□□□□ -0.02
CAPN3-220ENST00000569827 EVI5O60447 810 aa14.9□□□□□ -0.02
CAPN3-220ENST00000569827 JAG1P78504 1218 aa14.9□□□□□ -0.02
CAPN3-220ENST00000569827 ZNF280CQ8ND82 737 aa14.9□□□□□ -0.02
CAPN3-220ENST00000569827 CLUAP1Q96AJ1 413 aa14.9□□□□□ -0.02
CAPN3-220ENST00000569827 LRCH3Q96II8 777 aa14.9□□□□□ -0.02
CAPN3-220ENST00000569827 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.9□□□□□ -0.02
CAPN3-220ENST00000569827 PAK6Q9NQU5 681 aaPredicted RBP14.9□□□□□ -0.02
CAPN3-220ENST00000569827 STAP2Q9UGK3 403 aa14.9□□□□□ -0.02
CAPN3-220ENST00000569827 AKAP2Q9Y2D5 859 aa14.9□□□□□ -0.02
CAPN3-220ENST00000569827 NR2E3Q9Y5X4 410 aa14.9□□□□□ -0.02
CAPN3-220ENST00000569827 A0A0C4DFX4 3053 aa14.89□□□□□ -0.03
CAPN3-220ENST00000569827 LAMA2P24043 3122 aaKnown RBP14.89□□□□□ -0.03
CAPN3-220ENST00000569827 NAV1Q8NEY1 1877 aa14.89□□□□□ -0.03
CAPN3-220ENST00000569827 IRF5Q13568 498 aa14.89□□□□□ -0.03
CAPN3-220ENST00000569827 FAM110CQ1W6H9 321 aa14.89□□□□□ -0.03
CAPN3-220ENST00000569827 C7orf61Q8IZ16 206 aa14.89□□□□□ -0.03
CAPN3-220ENST00000569827 PXYLP1Q8TE99 480 aa14.89□□□□□ -0.03
CAPN3-220ENST00000569827 ASCC2Q9H1I8 757 aaPredicted RBP14.89□□□□□ -0.03
CAPN3-220ENST00000569827 AATFQ9NY61 560 aaKnown RBP eCLIP14.89□□□□□ -0.03
CAPN3-220ENST00000569827 ZMYND8Q9ULU4 1186 aaPredicted RBP14.89□□□□□ -0.03
CAPN3-220ENST00000569827 COL2A1P02458 1487 aaPredicted RBP14.89□□□□□ -0.03
CAPN3-220ENST00000569827 TBC1D12O60347 775 aa14.88□□□□□ -0.03
CAPN3-220ENST00000569827 GDF11O95390 407 aa14.88□□□□□ -0.03
CAPN3-220ENST00000569827 ARID4AP29374 1257 aaPredicted RBP14.88□□□□□ -0.03
CAPN3-220ENST00000569827 CAP2P40123 477 aa14.88□□□□□ -0.03
CAPN3-220ENST00000569827 MTMR2Q13614 643 aa14.88□□□□□ -0.03
CAPN3-220ENST00000569827 ADGRA1Q86SQ6 560 aa14.88□□□□□ -0.03
CAPN3-220ENST00000569827 MAPKAPK5Q8IW41 473 aa14.88□□□□□ -0.03
CAPN3-220ENST00000569827 PROCA1Q8NCQ7 364 aaPredicted RBP14.88□□□□□ -0.03
CAPN3-220ENST00000569827 FRAT1Q92837 279 aaPredicted RBP14.88□□□□□ -0.03
CAPN3-220ENST00000569827 DNAJC18Q9H819 358 aa14.88□□□□□ -0.03
CAPN3-220ENST00000569827 LRP2BPQ9P2M1 347 aa14.88□□□□□ -0.03
CAPN3-220ENST00000569827 PNMA3Q9UL41 463 aa14.88□□□□□ -0.03
CAPN3-220ENST00000569827 BCAR3O75815 825 aa14.87□□□□□ -0.03
CAPN3-220ENST00000569827 GNAI3P08754 354 aa14.87□□□□□ -0.03
CAPN3-220ENST00000569827 TRIM27P14373 513 aa14.87□□□□□ -0.03
CAPN3-220ENST00000569827 SYN1P17600 705 aa14.87□□□□□ -0.03
CAPN3-220ENST00000569827 GSTO1P78417 241 aa14.87□□□□□ -0.03
CAPN3-220ENST00000569827 MTX1Q13505 466 aa14.87□□□□□ -0.03
CAPN3-220ENST00000569827 TGFBRAP1Q8WUH2 860 aa14.87□□□□□ -0.03
CAPN3-220ENST00000569827 CRISPLD2Q9H0B8 497 aa14.87□□□□□ -0.03
CAPN3-220ENST00000569827 C1orf115Q9H7X2 142 aa14.87□□□□□ -0.03
CAPN3-220ENST00000569827 SAP30BPQ9UHR5 308 aaKnown RBP14.87□□□□□ -0.03
CAPN3-220ENST00000569827 HDAC5Q9UQL6 1122 aa14.87□□□□□ -0.03
CAPN3-220ENST00000569827 USP17L5A8MUK1 530 aa14.86□□□□□ -0.03
CAPN3-220ENST00000569827 ZBTB22O15209 634 aa14.86□□□□□ -0.03
CAPN3-220ENST00000569827 HMGCRP04035 888 aa14.86□□□□□ -0.03
CAPN3-220ENST00000569827 LDHCP07864 332 aa14.86□□□□□ -0.03
CAPN3-220ENST00000569827 CT47B1P0C2W7 299 aaPredicted RBP14.86□□□□□ -0.03
CAPN3-220ENST00000569827 CYP2B6P20813 491 aa14.86□□□□□ -0.03
CAPN3-220ENST00000569827 G3BP1Q13283 466 aaKnown RBP eCLIP14.86□□□□□ -0.03
CAPN3-220ENST00000569827 TRIB2Q92519 343 aa14.86□□□□□ -0.03
CAPN3-220ENST00000569827 DBNDD2Q9BQY9 259 aa14.86□□□□□ -0.03
CAPN3-220ENST00000569827 TXNRD2Q9NNW7 524 aa14.86□□□□□ -0.03
CAPN3-220ENST00000569827 GJD2Q9UKL4 321 aa14.86□□□□□ -0.03
CAPN3-220ENST00000569827 CUL9Q8IWT3 2517 aa14.85□□□□□ -0.03
CAPN3-220ENST00000569827 NPM3O75607 178 aaKnown RBP14.85□□□□□ -0.03
CAPN3-220ENST00000569827 GNAI2P04899 355 aa14.85□□□□□ -0.03
CAPN3-220ENST00000569827 GCLCP48506 637 aaPredicted RBP14.85□□□□□ -0.03
CAPN3-220ENST00000569827 MNX1P50219 401 aaPredicted RBP14.85□□□□□ -0.03
CAPN3-220ENST00000569827 DYNLL1P63167 89 aaKnown RBP14.85□□□□□ -0.03
CAPN3-220ENST00000569827 IRX3P78415 501 aaPredicted RBP14.85□□□□□ -0.03
CAPN3-220ENST00000569827 TTC39AQ5SRH9 613 aa14.85□□□□□ -0.03
CAPN3-220ENST00000569827 NAA16Q6N069 864 aaPredicted RBP14.85□□□□□ -0.03
CAPN3-220ENST00000569827 NECAB2Q7Z6G3 386 aa14.85□□□□□ -0.03
CAPN3-220ENST00000569827 P2RX7Q99572 595 aaKnown RBP14.85□□□□□ -0.03
CAPN3-220ENST00000569827 PALD1Q9ULE6 856 aa14.85□□□□□ -0.03
CAPN3-220ENST00000569827 FLT1P17948 1338 aa14.85□□□□□ -0.03
CAPN3-220ENST00000569827 NOL10Q9BSC4 688 aaKnown RBP14.84□□□□□ -0.03
CAPN3-220ENST00000569827 PAGR1Q9BTK6 254 aa14.84□□□□□ -0.03
CAPN3-220ENST00000569827 HMX1Q9NP08 348 aaPredicted RBP14.84□□□□□ -0.03
CAPN3-220ENST00000569827 TLR7Q9NYK1 1049 aaKnown RBP14.84□□□□□ -0.03
CAPN3-220ENST00000569827 NDUFB9Q9Y6M9 179 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms