RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 GOLGA6L4A6NEF3 574 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 WTIPA6NIX2 430 aaPredicted RBP6.27□□□□□ -1.41
SF3B3-213ENST00000569687 GOLGA8BA8MQT2 603 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 ESPNB1AK53 854 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 CPLX1O14810 134 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 CTAGE5O15320 804 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 ZBTB43O43298 467 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 PRKAB2O43741 272 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 BBOX1O75936 387 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 YEATS4O95619 227 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 CCDC192P0DO97 292 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 IFNAR1P17181 557 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 LIG1P18858 919 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 CLCN1P35523 988 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 METAP2P50579 478 aaKnown RBP eCLIP6.27□□□□□ -1.41
SF3B3-213ENST00000569687 PPP4CP60510 307 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 GRAPQ13588 217 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 MAP3K11Q16584 847 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 CRY2Q49AN0 593 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 SBK1Q52WX2 424 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 TMEM67Q5HYA8 995 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 ADALQ6DHV7 355 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 APOA5Q6Q788 366 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 CHRDL2Q6WN34 429 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 SYNE3Q6ZMZ3 975 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 SMIM5Q71RC9 77 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 VPS37DQ86XT2 251 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 PROCA1Q8NCQ7 364 aaPredicted RBP6.27□□□□□ -1.41
SF3B3-213ENST00000569687 ENGASEQ8NFI3 743 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 TDRD7Q8NHU6 1098 aaKnown RBP6.27□□□□□ -1.41
SF3B3-213ENST00000569687 GRAPLQ8TC17 118 aaPredicted RBP6.27□□□□□ -1.41
SF3B3-213ENST00000569687 ZNF384Q8TF68 577 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 NSUN4Q96CB9 384 aaKnown RBP6.27□□□□□ -1.41
SF3B3-213ENST00000569687 TRIM44Q96DX7 344 aaPredicted RBP6.27□□□□□ -1.41
SF3B3-213ENST00000569687 C8orf76Q96K31 380 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 TRAIPQ9BWF2 469 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 TMEM121BQ9BXQ6 578 aaPredicted RBP6.27□□□□□ -1.41
SF3B3-213ENST00000569687 CLSTN2Q9H4D0 955 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 ATP8A2Q9NTI2 1148 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 POLR3EQ9NVU0 708 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 RAI14Q9P0K7 980 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 SLC12A7Q9Y666 1083 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 UBR3Q6ZT12 1888 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 COL24A1Q17RW2 1714 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 LAMA4Q16363 1823 aa6.27□□□□□ -1.41
SF3B3-213ENST00000569687 NEDD4P46934 1319 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 STK36Q9NRP7 1315 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.26□□□□□ -1.41
SF3B3-213ENST00000569687 CCDC196A0A1B0GTZ2 297 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 IFIT3O14879 490 aaKnown RBP6.26□□□□□ -1.41
SF3B3-213ENST00000569687 ORC4O43929 436 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 RAD21O60216 631 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 KDM4AO75164 1064 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 FMNL1O95466 1100 aaPredicted RBP6.26□□□□□ -1.41
SF3B3-213ENST00000569687 U2AF2P26368 475 aaKnown RBP eCLIP6.26□□□□□ -1.41
SF3B3-213ENST00000569687 IARSP41252 1262 aaKnown RBP6.26□□□□□ -1.41
SF3B3-213ENST00000569687 TDO2P48775 406 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 MDM2Q00987 491 aaPredicted RBP6.26□□□□□ -1.41
SF3B3-213ENST00000569687 CTDSPL2Q05D32 466 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 PPARAQ07869 468 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 SNW1Q13573 536 aaKnown RBP6.26□□□□□ -1.41
SF3B3-213ENST00000569687 SART3Q15020 963 aaKnown RBP6.26□□□□□ -1.41
SF3B3-213ENST00000569687 SEC23AQ15436 765 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 TMC4Q7Z404 712 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 ADGRA1Q86SQ6 560 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 LINC00301Q8NCQ3 95 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 WDR66Q8TBY9 1149 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 WASF1Q92558 559 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 ANKS1AQ92625 1134 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 ESR2Q92731 530 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 CCDC97Q96F63 343 aaPredicted RBP6.26□□□□□ -1.41
SF3B3-213ENST00000569687 USP28Q96RU2 1077 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 CRAMP1Q96RY5 1269 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 NUP62CLQ9H1M0 184 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 SENP2Q9HC62 589 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 RRAGDQ9NQL2 400 aaPredicted RBP6.26□□□□□ -1.41
SF3B3-213ENST00000569687 INCENPQ9NQS7 918 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 DACT1Q9NYF0 836 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 ABCF2Q9UG63 623 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 SERPINA10Q9UK55 444 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 NAP1L2Q9ULW6 460 aaPredicted RBP6.26□□□□□ -1.41
SF3B3-213ENST00000569687 NOL7Q9UMY1 257 aaKnown RBP6.26□□□□□ -1.41
SF3B3-213ENST00000569687 MORC2Q9Y6X9 1032 aaPredicted RBP6.26□□□□□ -1.41
SF3B3-213ENST00000569687 MYH7P12883 1935 aa6.26□□□□□ -1.41
SF3B3-213ENST00000569687 DOCK2Q92608 1830 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 TCHHQ07283 1943 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 FAM237AA0A1B0GTK4 181 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 CCDC69A6NI79 296 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 EVI5O60447 810 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 SERPINB2P05120 415 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 LDHCP07864 332 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 GYS1P13807 737 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 ATP2B4P23634 1241 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 CMA1P23946 247 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 CDC27P30260 824 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 SSTR3P32745 418 aaPredicted RBP6.25□□□□□ -1.41
SF3B3-213ENST00000569687 GSTO1P78417 241 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 KIF23Q02241 960 aaPredicted RBP6.25□□□□□ -1.41
SF3B3-213ENST00000569687 MECOMQ03112 1051 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 FAM160A1Q05DH4 1040 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms