RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 TEX11Q8IYF3 940 aa17.01■□□□□ 0.31
GTF3C1-211ENST00000569653 ZNF512BQ96KM6 892 aaPredicted RBP17.01■□□□□ 0.31
GTF3C1-211ENST00000569653 PICK1Q9NRD5 415 aa17.01■□□□□ 0.31
GTF3C1-211ENST00000569653 AATFQ9NY61 560 aaKnown RBP eCLIP17.01■□□□□ 0.31
GTF3C1-211ENST00000569653 EXOC6BQ9Y2D4 811 aa17.01■□□□□ 0.31
GTF3C1-211ENST00000569653 DDX60LQ5H9U9 1706 aaKnown RBP17.01■□□□□ 0.31
GTF3C1-211ENST00000569653 TRIM75PA6NK02 468 aa17■□□□□ 0.31
GTF3C1-211ENST00000569653 LDHCP07864 332 aa17■□□□□ 0.31
GTF3C1-211ENST00000569653 OSBPP22059 807 aa17■□□□□ 0.31
GTF3C1-211ENST00000569653 PSMC4P43686 418 aa17■□□□□ 0.31
GTF3C1-211ENST00000569653 SLC9C1Q4G0N8 1177 aa17■□□□□ 0.31
GTF3C1-211ENST00000569653 TREML2Q5T2D2 321 aa17■□□□□ 0.31
GTF3C1-211ENST00000569653 NAA16Q6N069 864 aaPredicted RBP17■□□□□ 0.31
GTF3C1-211ENST00000569653 PPP4CP60510 307 aa16.99■□□□□ 0.31
GTF3C1-211ENST00000569653 GADL1Q6ZQY3 521 aa16.99■□□□□ 0.31
GTF3C1-211ENST00000569653 PARK7Q99497 189 aaKnown RBP16.99■□□□□ 0.31
GTF3C1-211ENST00000569653 ANTXR1Q9H6X2 564 aa16.99■□□□□ 0.31
GTF3C1-211ENST00000569653 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.99■□□□□ 0.311e-6■■■■□ 24.9
GTF3C1-211ENST00000569653 SRRDQ9UH36 339 aa16.99■□□□□ 0.31
GTF3C1-211ENST00000569653 FLT1P17948 1338 aa16.98■□□□□ 0.31
GTF3C1-211ENST00000569653 MAP4K4O95819 1239 aaPredicted RBP16.98■□□□□ 0.31
GTF3C1-211ENST00000569653 DYNLL1P63167 89 aaKnown RBP16.98■□□□□ 0.31
GTF3C1-211ENST00000569653 MTFR1Q15390 333 aa16.98■□□□□ 0.31
GTF3C1-211ENST00000569653 CCDC158Q5M9N0 1113 aa16.98■□□□□ 0.31
GTF3C1-211ENST00000569653 MAPKAPK5Q8IW41 473 aa16.98■□□□□ 0.31
GTF3C1-211ENST00000569653 SIRT2Q8IXJ6 389 aa16.98■□□□□ 0.31
GTF3C1-211ENST00000569653 CAP2P40123 477 aa16.97■□□□□ 0.31
GTF3C1-211ENST00000569653 KIF22Q14807 665 aa16.97■□□□□ 0.31
GTF3C1-211ENST00000569653 TGFBRAP1Q8WUH2 860 aa16.97■□□□□ 0.31
GTF3C1-211ENST00000569653 SHISA4Q96DD7 197 aa16.97■□□□□ 0.31
GTF3C1-211ENST00000569653 GABRQQ9UN88 632 aa16.97■□□□□ 0.31
GTF3C1-211ENST00000569653 PLXNB2O15031 1838 aa16.97■□□□□ 0.31
GTF3C1-211ENST00000569653 PRKCZQ05513 592 aa16.96■□□□□ 0.31
GTF3C1-211ENST00000569653 SPP2Q13103 211 aa16.96■□□□□ 0.31
GTF3C1-211ENST00000569653 ARHGEF6Q15052 776 aa16.96■□□□□ 0.31
GTF3C1-211ENST00000569653 FASTKD5Q7L8L6 764 aaKnown RBP16.96■□□□□ 0.31
GTF3C1-211ENST00000569653 METTL16Q86W50 562 aaKnown RBP16.96■□□□□ 0.31
GTF3C1-211ENST00000569653 IL1RAPL2Q9NP60 686 aa16.96■□□□□ 0.31
GTF3C1-211ENST00000569653 AGTPBP1Q9UPW5 1226 aa16.96■□□□□ 0.31
GTF3C1-211ENST00000569653 MYPNQ86TC9 1320 aa16.96■□□□□ 0.3
GTF3C1-211ENST00000569653 NAV1Q8NEY1 1877 aa16.95■□□□□ 0.3
GTF3C1-211ENST00000569653 FMNL1O95466 1100 aaPredicted RBP16.95■□□□□ 0.3
GTF3C1-211ENST00000569653 GNRH1P01148 92 aa16.95■□□□□ 0.3
GTF3C1-211ENST00000569653 SLC4A8Q2Y0W8 1093 aa16.95■□□□□ 0.3
GTF3C1-211ENST00000569653 SAP30BPQ9UHR5 308 aaKnown RBP16.95■□□□□ 0.3
GTF3C1-211ENST00000569653 PALD1Q9ULE6 856 aa16.95■□□□□ 0.3
GTF3C1-211ENST00000569653 SLC45A1Q9Y2W3 748 aa16.95■□□□□ 0.3
GTF3C1-211ENST00000569653 HMGCS2P54868 508 aa16.94■□□□□ 0.3
GTF3C1-211ENST00000569653 PRMT2P55345 433 aa16.94■□□□□ 0.3
GTF3C1-211ENST00000569653 AACSQ86V21 672 aa16.94■□□□□ 0.3
GTF3C1-211ENST00000569653 MIGA1Q8NAN2 632 aa16.94■□□□□ 0.3
GTF3C1-211ENST00000569653 ZBTB40Q9NUA8 1239 aa16.94■□□□□ 0.3
GTF3C1-211ENST00000569653 HERC5Q9UII4 1024 aaKnown RBP16.94■□□□□ 0.3
GTF3C1-211ENST00000569653 COG6Q9Y2V7 657 aa16.94■□□□□ 0.3
GTF3C1-211ENST00000569653 PEX10O60683 326 aa16.93■□□□□ 0.3
GTF3C1-211ENST00000569653 IDH1O75874 414 aaKnown RBP16.93■□□□□ 0.3
GTF3C1-211ENST00000569653 BAG3O95817 575 aa16.93■□□□□ 0.3
GTF3C1-211ENST00000569653 CYP7A1P22680 504 aa16.93■□□□□ 0.3
GTF3C1-211ENST00000569653 EVX2Q03828 476 aa16.93■□□□□ 0.3
GTF3C1-211ENST00000569653 NBPF11Q86T75 865 aa16.93■□□□□ 0.3
GTF3C1-211ENST00000569653 ZNF280CQ8ND82 737 aa16.93■□□□□ 0.3
GTF3C1-211ENST00000569653 TMEM106CQ9BVX2 250 aa16.93■□□□□ 0.3
GTF3C1-211ENST00000569653 PI4KBQ9UBF8 816 aa16.93■□□□□ 0.3
GTF3C1-211ENST00000569653 GDF11O95390 407 aa16.92■□□□□ 0.3
GTF3C1-211ENST00000569653 GRK4P32298 578 aa16.92■□□□□ 0.3
GTF3C1-211ENST00000569653 FCGRTP55899 365 aa16.92■□□□□ 0.3
GTF3C1-211ENST00000569653 C20orf194Q5TEA3 1177 aa16.92■□□□□ 0.3
GTF3C1-211ENST00000569653 ANKRD13CQ8N6S4 541 aa16.92■□□□□ 0.3
GTF3C1-211ENST00000569653 MAGEB6Q8N7X4 407 aa16.92■□□□□ 0.3
GTF3C1-211ENST00000569653 RHPN1Q8TCX5 695 aa16.92■□□□□ 0.3
GTF3C1-211ENST00000569653 USP17L5A8MUK1 530 aa16.91■□□□□ 0.3
GTF3C1-211ENST00000569653 PLCG2P16885 1265 aa16.91■□□□□ 0.3
GTF3C1-211ENST00000569653 SH3D19Q5HYK7 790 aa16.91■□□□□ 0.3
GTF3C1-211ENST00000569653 POTEEQ6S8J3 1075 aa16.91■□□□□ 0.3
GTF3C1-211ENST00000569653 PROCA1Q8NCQ7 364 aaPredicted RBP16.91■□□□□ 0.3
GTF3C1-211ENST00000569653 RAET1EQ8TD07 263 aa16.91■□□□□ 0.3
GTF3C1-211ENST00000569653 NOL10Q9BSC4 688 aaKnown RBP16.91■□□□□ 0.3
GTF3C1-211ENST00000569653 WDR18Q9BV38 432 aa16.91■□□□□ 0.3
GTF3C1-211ENST00000569653 DHX36Q9H2U1 1008 aaKnown RBP16.91■□□□□ 0.3
GTF3C1-211ENST00000569653 MYH7P12883 1935 aa16.9■□□□□ 0.3
GTF3C1-211ENST00000569653 APBB1O00213 710 aa16.9■□□□□ 0.3
GTF3C1-211ENST00000569653 ELNP15502 786 aa16.9■□□□□ 0.3
GTF3C1-211ENST00000569653 FLT3LGP49771 235 aa16.9■□□□□ 0.3
GTF3C1-211ENST00000569653 MTMR2Q13614 643 aa16.9■□□□□ 0.3
GTF3C1-211ENST00000569653 SMCR8Q8TEV9 937 aaPredicted RBP16.9■□□□□ 0.3
GTF3C1-211ENST00000569653 EDC3Q96F86 508 aaKnown RBP16.9■□□□□ 0.3
GTF3C1-211ENST00000569653 RIOK1Q9BRS2 568 aaKnown RBP16.9■□□□□ 0.3
GTF3C1-211ENST00000569653 ASCC2Q9H1I8 757 aaPredicted RBP16.9■□□□□ 0.3
GTF3C1-211ENST00000569653 ZBTB21Q9ULJ3 1066 aa16.9■□□□□ 0.3
GTF3C1-211ENST00000569653 ALPK3Q96L96 1907 aa16.9■□□□□ 0.3
GTF3C1-211ENST00000569653 BAZ2AQ9UIF9 1905 aaKnown RBP16.9■□□□□ 0.3
GTF3C1-211ENST00000569653 CCL5P13501 91 aa16.89■□□□□ 0.29
GTF3C1-211ENST00000569653 SLFNL1Q499Z3 407 aa16.89■□□□□ 0.29
GTF3C1-211ENST00000569653 UBE2Q1Q7Z7E8 422 aa16.89■□□□□ 0.29
GTF3C1-211ENST00000569653 ERC1Q8IUD2 1116 aa16.89■□□□□ 0.29
GTF3C1-211ENST00000569653 UNC93B1Q9H1C4 597 aa16.89■□□□□ 0.29
GTF3C1-211ENST00000569653 RANBP2P49792 3224 aaKnown RBP16.89■□□□□ 0.29
GTF3C1-211ENST00000569653 HOXD10P28358 340 aa16.88■□□□□ 0.29
GTF3C1-211ENST00000569653 FAM110CQ1W6H9 321 aa16.88■□□□□ 0.29
GTF3C1-211ENST00000569653 FOXP4Q8IVH2 680 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms