RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 TSHZ3Q63HK5 1081 aa16.71■□□□□ 0.27
HERPUD1-218ENST00000569569 OTUD7BQ6GQQ9 843 aa16.71■□□□□ 0.27
HERPUD1-218ENST00000569569 SMC5Q8IY18 1101 aa16.71■□□□□ 0.27
HERPUD1-218ENST00000569569 MS4A4AQ96JQ5 239 aa16.71■□□□□ 0.27
HERPUD1-218ENST00000569569 HERC5Q9UII4 1024 aaKnown RBP16.71■□□□□ 0.27
HERPUD1-218ENST00000569569 PHIPQ8WWQ0 1821 aa16.7■□□□□ 0.26
HERPUD1-218ENST00000569569 NAV1Q8NEY1 1877 aa16.7■□□□□ 0.26
HERPUD1-218ENST00000569569 CTNND1O60716 968 aaKnown RBP16.7■□□□□ 0.26
HERPUD1-218ENST00000569569 GLRX3O76003 335 aaKnown RBP16.7■□□□□ 0.26
HERPUD1-218ENST00000569569 IGHDP01880 384 aa16.7■□□□□ 0.26
HERPUD1-218ENST00000569569 MX1P20591 662 aa16.7■□□□□ 0.26
HERPUD1-218ENST00000569569 FOXP4Q8IVH2 680 aaPredicted RBP16.7■□□□□ 0.26
HERPUD1-218ENST00000569569 SCYL3Q8IZE3 742 aa16.7■□□□□ 0.26
HERPUD1-218ENST00000569569 OTUD7AQ8TE49 926 aaPredicted RBP16.7■□□□□ 0.26
HERPUD1-218ENST00000569569 PALD1Q9ULE6 856 aa16.7■□□□□ 0.26
HERPUD1-218ENST00000569569 BAZ2AQ9UIF9 1905 aaKnown RBP16.7■□□□□ 0.26
HERPUD1-218ENST00000569569 PTPRFP10586 1907 aa16.69■□□□□ 0.26
HERPUD1-218ENST00000569569 IRF6O14896 467 aa16.69■□□□□ 0.26
HERPUD1-218ENST00000569569 HLA-DOAP06340 250 aa16.69■□□□□ 0.26
HERPUD1-218ENST00000569569 KBTBD3Q8NAB2 608 aa16.69■□□□□ 0.26
HERPUD1-218ENST00000569569 PI4K2BQ8TCG2 481 aa16.69■□□□□ 0.26
HERPUD1-218ENST00000569569 CFHR5Q9BXR6 569 aa16.69■□□□□ 0.26
HERPUD1-218ENST00000569569 CRNKL1Q9BZJ0 848 aaKnown RBP16.69■□□□□ 0.26
HERPUD1-218ENST00000569569 PICK1Q9NRD5 415 aa16.69■□□□□ 0.26
HERPUD1-218ENST00000569569 SALL3Q9BXA9 1300 aa16.69■□□□□ 0.26
HERPUD1-218ENST00000569569 CCL15-CCL14A0A0B4J2E2 113 aa16.68■□□□□ 0.26
HERPUD1-218ENST00000569569 FAM196BA6NMK8 535 aa16.68■□□□□ 0.26
HERPUD1-218ENST00000569569 IGF2BP3O00425 579 aaKnown RBP eCLIP16.68■□□□□ 0.26
HERPUD1-218ENST00000569569 TBC1D8O95759 1140 aa16.68■□□□□ 0.26
HERPUD1-218ENST00000569569 CETPP11597 493 aa16.68■□□□□ 0.26
HERPUD1-218ENST00000569569 IRX6P78412 446 aaPredicted RBP16.68■□□□□ 0.26
HERPUD1-218ENST00000569569 SNAPC2Q13487 334 aa16.68■□□□□ 0.26
HERPUD1-218ENST00000569569 CCL15Q16663 113 aa16.68■□□□□ 0.26
HERPUD1-218ENST00000569569 METTL16Q86W50 562 aaKnown RBP16.68■□□□□ 0.26
HERPUD1-218ENST00000569569 PTPN18Q99952 460 aa16.68■□□□□ 0.26
HERPUD1-218ENST00000569569 SAP30BPQ9UHR5 308 aaKnown RBP16.68■□□□□ 0.26
HERPUD1-218ENST00000569569 MYH8P13535 1937 aa16.67■□□□□ 0.26
HERPUD1-218ENST00000569569 PTPRAP18433 802 aa16.67■□□□□ 0.26
HERPUD1-218ENST00000569569 SLFNL1Q499Z3 407 aa16.67■□□□□ 0.26
HERPUD1-218ENST00000569569 B4GALNT3Q6L9W6 998 aa16.67■□□□□ 0.26
HERPUD1-218ENST00000569569 TTC6Q86TZ1 520 aa16.67■□□□□ 0.26
HERPUD1-218ENST00000569569 TNS4Q8IZW8 715 aa16.67■□□□□ 0.26
HERPUD1-218ENST00000569569 LCORLQ8N3X6 602 aa16.67■□□□□ 0.26
HERPUD1-218ENST00000569569 CRACR2BQ8N4Y2 399 aaPredicted RBP16.67■□□□□ 0.26
HERPUD1-218ENST00000569569 BRI3BPQ8WY22 251 aa16.67■□□□□ 0.26
HERPUD1-218ENST00000569569 TRIM34Q9BYJ4 488 aa16.67■□□□□ 0.26
HERPUD1-218ENST00000569569 STAP2Q9UGK3 403 aa16.67■□□□□ 0.26
HERPUD1-218ENST00000569569 KCNH4Q9UQ05 1017 aa16.67■□□□□ 0.26
HERPUD1-218ENST00000569569 CXCL11O14625 94 aa16.66■□□□□ 0.26
HERPUD1-218ENST00000569569 CHGBP05060 677 aa16.66■□□□□ 0.26
HERPUD1-218ENST00000569569 CAP2P40123 477 aa16.66■□□□□ 0.26
HERPUD1-218ENST00000569569 LRRFIP1Q32MZ4 808 aaKnown RBP16.66■□□□□ 0.26
HERPUD1-218ENST00000569569 NOM1Q5C9Z4 860 aaKnown RBP16.66■□□□□ 0.26
HERPUD1-218ENST00000569569 LNPKQ9C0E8 428 aa16.66■□□□□ 0.26
HERPUD1-218ENST00000569569 ARMT1Q9H993 441 aa16.66■□□□□ 0.26
HERPUD1-218ENST00000569569 ZHX2Q9Y6X8 837 aa16.66■□□□□ 0.26
HERPUD1-218ENST00000569569 DDX60LQ5H9U9 1706 aaKnown RBP16.65■□□□□ 0.26
HERPUD1-218ENST00000569569 GPR25O00155 361 aa16.65■□□□□ 0.26
HERPUD1-218ENST00000569569 RNF113AO15541 343 aaKnown RBP16.65■□□□□ 0.26
HERPUD1-218ENST00000569569 MBD4O95243 580 aa16.65■□□□□ 0.26
HERPUD1-218ENST00000569569 ZFYP08048 801 aaPredicted RBP16.65■□□□□ 0.26
HERPUD1-218ENST00000569569 PDE1AP54750 535 aa16.65■□□□□ 0.26
HERPUD1-218ENST00000569569 SDR42E1Q8WUS8 393 aa16.65■□□□□ 0.26
HERPUD1-218ENST00000569569 PUS7LQ9H0K6 701 aaKnown RBP16.65■□□□□ 0.26
HERPUD1-218ENST00000569569 AFG3L2Q9Y4W6 797 aa16.65■□□□□ 0.26
HERPUD1-218ENST00000569569 POLR3DP05423 398 aaPredicted RBP16.64■□□□□ 0.25
HERPUD1-218ENST00000569569 NUCB1Q02818 461 aa16.64■□□□□ 0.25
HERPUD1-218ENST00000569569 SLC4A8Q2Y0W8 1093 aa16.64■□□□□ 0.25
HERPUD1-218ENST00000569569 CHD1LQ86WJ1 897 aa16.64■□□□□ 0.25
HERPUD1-218ENST00000569569 EHD4Q9H223 541 aa16.64■□□□□ 0.25
HERPUD1-218ENST00000569569 R3HDMLQ9H3Y0 253 aa16.64■□□□□ 0.25
HERPUD1-218ENST00000569569 DNAJC18Q9H819 358 aa16.64■□□□□ 0.25
HERPUD1-218ENST00000569569 ZCCHC17Q9NP64 241 aaKnown RBP16.64■□□□□ 0.25
HERPUD1-218ENST00000569569 DCP1AQ9NPI6 582 aaPredicted RBP16.64■□□□□ 0.25
HERPUD1-218ENST00000569569 ATP8A2Q9NTI2 1148 aa16.64■□□□□ 0.25
HERPUD1-218ENST00000569569 MCM9Q9NXL9 1143 aa16.64■□□□□ 0.25
HERPUD1-218ENST00000569569 SERPINB13Q9UIV8 391 aa16.64■□□□□ 0.25
HERPUD1-218ENST00000569569 BTBD19C9JJ37 291 aa16.63■□□□□ 0.25
HERPUD1-218ENST00000569569 PLCD1P51178 756 aa16.63■□□□□ 0.25
HERPUD1-218ENST00000569569 RRP1BQ14684 758 aaKnown RBP16.63■□□□□ 0.25
HERPUD1-218ENST00000569569 FAM43AQ8N2R8 423 aa16.63■□□□□ 0.25
HERPUD1-218ENST00000569569 ZNF296Q8WUU4 475 aaPredicted RBP16.63■□□□□ 0.25
HERPUD1-218ENST00000569569 APPBP2Q92624 585 aa16.63■□□□□ 0.25
HERPUD1-218ENST00000569569 TBC1D2Q9BYX2 928 aa16.63■□□□□ 0.25
HERPUD1-218ENST00000569569 GINM1Q9NU53 330 aa16.63■□□□□ 0.25
HERPUD1-218ENST00000569569 PRKAB2O43741 272 aa16.62■□□□□ 0.25
HERPUD1-218ENST00000569569 ASNSP08243 561 aa16.62■□□□□ 0.25
HERPUD1-218ENST00000569569 CRHR2Q13324 411 aa16.62■□□□□ 0.25
HERPUD1-218ENST00000569569 TAF1CQ15572 869 aaPredicted RBP16.62■□□□□ 0.25
HERPUD1-218ENST00000569569 OSBP2Q969R2 916 aa16.62■□□□□ 0.25
HERPUD1-218ENST00000569569 DDRGK1Q96HY6 314 aa16.62■□□□□ 0.25
HERPUD1-218ENST00000569569 FSD1Q9BTV5 496 aa16.62■□□□□ 0.25
HERPUD1-218ENST00000569569 ZFYVE28Q9HCC9 887 aa16.62■□□□□ 0.25
HERPUD1-218ENST00000569569 SLC4A4Q9Y6R1 1079 aa16.62■□□□□ 0.25
HERPUD1-218ENST00000569569 A0A0G2JLL6 359 aaPredicted RBP16.61■□□□□ 0.25
HERPUD1-218ENST00000569569 USP17L5A8MUK1 530 aa16.61■□□□□ 0.25
HERPUD1-218ENST00000569569 FKTNO75072 461 aa16.61■□□□□ 0.25
HERPUD1-218ENST00000569569 TATDN1Q6P1N9 297 aa16.61■□□□□ 0.25
HERPUD1-218ENST00000569569 FASTKD5Q7L8L6 764 aaKnown RBP16.61■□□□□ 0.25
HERPUD1-218ENST00000569569 PRRT2Q7Z6L0 340 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms