RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 SKIV2LQ15477 1246 aaKnown RBP8.59□□□□□ -1.03
HERPUD1-217ENST00000569429 RAB30Q15771 203 aa8.59□□□□□ -1.03
HERPUD1-217ENST00000569429 RASIP1Q5U651 963 aa8.59□□□□□ -1.03
HERPUD1-217ENST00000569429 USP6NLQ92738 828 aa8.59□□□□□ -1.03
HERPUD1-217ENST00000569429 JARID2Q92833 1246 aaPredicted RBP8.59□□□□□ -1.03
HERPUD1-217ENST00000569429 CFAP53Q96M91 514 aa8.59□□□□□ -1.03
HERPUD1-217ENST00000569429 SPINK5Q9NQ38 1064 aaPredicted RBP8.59□□□□□ -1.03
HERPUD1-217ENST00000569429 CWC25Q9NXE8 425 aaPredicted RBP8.59□□□□□ -1.03
HERPUD1-217ENST00000569429 MORF4L1Q9UBU8 362 aa8.59□□□□□ -1.03
HERPUD1-217ENST00000569429 DDX20Q9UHI6 824 aaKnown RBP8.59□□□□□ -1.03
HERPUD1-217ENST00000569429 ZHX2Q9Y6X8 837 aa8.59□□□□□ -1.03
HERPUD1-217ENST00000569429 A0A0G2JMZ2 1700 aa8.59□□□□□ -1.03
HERPUD1-217ENST00000569429 DOCK2Q92608 1830 aa8.59□□□□□ -1.03
HERPUD1-217ENST00000569429 FAM208BQ5VWN6 2430 aa8.58□□□□□ -1.04
HERPUD1-217ENST00000569429 GRXCR1A8MXD5 290 aa8.58□□□□□ -1.04
HERPUD1-217ENST00000569429 SNAP23O00161 211 aa8.58□□□□□ -1.04
HERPUD1-217ENST00000569429 SCYL3Q8IZE3 742 aa8.58□□□□□ -1.04
HERPUD1-217ENST00000569429 MICALL1Q8N3F8 863 aa8.58□□□□□ -1.04
HERPUD1-217ENST00000569429 TDRD7Q8NHU6 1098 aaKnown RBP8.58□□□□□ -1.04
HERPUD1-217ENST00000569429 MPHOSPH8Q99549 860 aa8.58□□□□□ -1.04
HERPUD1-217ENST00000569429 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.58□□□□□ -1.042e-9■■□□□ 13.7
HERPUD1-217ENST00000569429 MRIQ9BWK5 157 aa8.58□□□□□ -1.04
HERPUD1-217ENST00000569429 HYPKQ9NX55 129 aa8.58□□□□□ -1.04
HERPUD1-217ENST00000569429 DBF4Q9UBU7 674 aaPredicted RBP8.58□□□□□ -1.04
HERPUD1-217ENST00000569429 MSRAQ9UJ68 235 aa8.58□□□□□ -1.04
HERPUD1-217ENST00000569429 ANKRD11Q6UB99 2663 aaPredicted RBP8.58□□□□□ -1.04
HERPUD1-217ENST00000569429 WDR87Q6ZQQ6 2873 aa8.58□□□□□ -1.04
HERPUD1-217ENST00000569429 SPTBN2O15020 2390 aa8.57□□□□□ -1.04
HERPUD1-217ENST00000569429 GFRA3O60609 400 aa8.57□□□□□ -1.04
HERPUD1-217ENST00000569429 CLTBP09497 229 aa8.57□□□□□ -1.04
HERPUD1-217ENST00000569429 RAG1P15918 1043 aa8.57□□□□□ -1.04
HERPUD1-217ENST00000569429 RGS2P41220 211 aa8.57□□□□□ -1.04
HERPUD1-217ENST00000569429 TLE2Q04725 743 aa8.57□□□□□ -1.04
HERPUD1-217ENST00000569429 MAPK8IP2Q13387 824 aaPredicted RBP8.57□□□□□ -1.04
HERPUD1-217ENST00000569429 CCL14Q16627 93 aa8.57□□□□□ -1.04
HERPUD1-217ENST00000569429 GJD3Q8N144 294 aa8.57□□□□□ -1.04
HERPUD1-217ENST00000569429 ARRDC4Q8NCT1 418 aa8.57□□□□□ -1.04
HERPUD1-217ENST00000569429 FAM151AQ8WW52 585 aa8.57□□□□□ -1.04
HERPUD1-217ENST00000569429 COL26A1Q96A83 441 aa8.57□□□□□ -1.04
HERPUD1-217ENST00000569429 ZDHHC15Q96MV8 337 aa8.57□□□□□ -1.04
HERPUD1-217ENST00000569429 SLC28A3Q9HAS3 691 aa8.57□□□□□ -1.04
HERPUD1-217ENST00000569429 PICK1Q9NRD5 415 aa8.57□□□□□ -1.04
HERPUD1-217ENST00000569429 EP300Q09472 2414 aaPredicted RBP8.56□□□□□ -1.04
HERPUD1-217ENST00000569429 UTYO14607 1347 aa8.56□□□□□ -1.04
HERPUD1-217ENST00000569429 PLXNA3P51805 1871 aa8.56□□□□□ -1.04
HERPUD1-217ENST00000569429 PHF20L1A8MW92 1017 aa8.56□□□□□ -1.04
HERPUD1-217ENST00000569429 NEFMP07197 916 aa8.56□□□□□ -1.04
HERPUD1-217ENST00000569429 PTPN5P54829 565 aa8.56□□□□□ -1.04
HERPUD1-217ENST00000569429 TREML2Q5T2D2 321 aa8.56□□□□□ -1.04
HERPUD1-217ENST00000569429 GJC2Q5T442 439 aaPredicted RBP8.56□□□□□ -1.04
HERPUD1-217ENST00000569429 PROCA1Q8NCQ7 364 aaPredicted RBP8.56□□□□□ -1.04
HERPUD1-217ENST00000569429 HLA-CQ95604 372 aa8.56□□□□□ -1.04
HERPUD1-217ENST00000569429 TEKT1Q969V4 418 aa8.56□□□□□ -1.04
HERPUD1-217ENST00000569429 APBA2Q99767 749 aa8.56□□□□□ -1.04
HERPUD1-217ENST00000569429 MYD88Q99836 296 aa8.56□□□□□ -1.04
HERPUD1-217ENST00000569429 MTCH2Q9Y6C9 303 aa8.56□□□□□ -1.04
HERPUD1-217ENST00000569429 POTEB3A0JP26 581 aa8.55□□□□□ -1.04
HERPUD1-217ENST00000569429 KBTBD13C9JR72 458 aa8.55□□□□□ -1.04
HERPUD1-217ENST00000569429 GOLGA2Q08379 1002 aa8.55□□□□□ -1.04
HERPUD1-217ENST00000569429 PABPC4Q13310 644 aaKnown RBP eCLIP8.55□□□□□ -1.04
HERPUD1-217ENST00000569429 NFE2L2Q16236 605 aa8.55□□□□□ -1.04
HERPUD1-217ENST00000569429 TMEM240Q5SV17 173 aa8.55□□□□□ -1.04
HERPUD1-217ENST00000569429 MORN1Q5T089 497 aa8.55□□□□□ -1.04
HERPUD1-217ENST00000569429 HDGFL1Q5TGJ6 251 aa8.55□□□□□ -1.04
HERPUD1-217ENST00000569429 MFSD14CQ5VZR4 134 aa8.55□□□□□ -1.04
HERPUD1-217ENST00000569429 APOBEC3HQ6NTF7 200 aaKnown RBP8.55□□□□□ -1.04
HERPUD1-217ENST00000569429 CCDC174Q6PII3 467 aa8.55□□□□□ -1.04
HERPUD1-217ENST00000569429 POTEBQ6S5H4 581 aa8.55□□□□□ -1.04
HERPUD1-217ENST00000569429 FAM178BQ8IXR5 827 aa8.55□□□□□ -1.04
HERPUD1-217ENST00000569429 MFSD14AQ96MC6 490 aa8.55□□□□□ -1.04
HERPUD1-217ENST00000569429 NKX2-4Q9H2Z4 354 aa8.55□□□□□ -1.04
HERPUD1-217ENST00000569429 DMXL1Q9Y485 3027 aa8.55□□□□□ -1.04
HERPUD1-217ENST00000569429 GPR179Q6PRD1 2367 aa8.55□□□□□ -1.04
HERPUD1-217ENST00000569429 ATAD5Q96QE3 1844 aa8.54□□□□□ -1.04
HERPUD1-217ENST00000569429 DCXO43602 365 aa8.54□□□□□ -1.04
HERPUD1-217ENST00000569429 GTPBP6O43824 516 aaPredicted RBP8.54□□□□□ -1.04
HERPUD1-217ENST00000569429 TAF5LO75529 589 aa8.54□□□□□ -1.04
HERPUD1-217ENST00000569429 HOXB7P09629 217 aa8.54□□□□□ -1.04
HERPUD1-217ENST00000569429 ITGA6P23229 1130 aa8.54□□□□□ -1.04
HERPUD1-217ENST00000569429 MAPK4P31152 587 aa8.54□□□□□ -1.04
HERPUD1-217ENST00000569429 HFE2Q6ZVN8 426 aa8.54□□□□□ -1.04
HERPUD1-217ENST00000569429 C16orf59Q7L2K0 433 aa8.54□□□□□ -1.04
HERPUD1-217ENST00000569429 PRSS33Q8NF86 280 aa8.54□□□□□ -1.04
HERPUD1-217ENST00000569429 PRRX2Q99811 253 aa8.54□□□□□ -1.04
HERPUD1-217ENST00000569429 ASCC2Q9H1I8 757 aaPredicted RBP8.54□□□□□ -1.04
HERPUD1-217ENST00000569429 CEP250Q9BV73 2442 aa8.54□□□□□ -1.04
HERPUD1-217ENST00000569429 ATRNL1Q5VV63 1379 aa8.53□□□□□ -1.04
HERPUD1-217ENST00000569429 TRIM75PA6NK02 468 aa8.53□□□□□ -1.04
HERPUD1-217ENST00000569429 CNGA1P29973 690 aa8.53□□□□□ -1.04
HERPUD1-217ENST00000569429 ADCYAP1R1P41586 468 aa8.53□□□□□ -1.04
HERPUD1-217ENST00000569429 GRIK5Q16478 980 aa8.53□□□□□ -1.04
HERPUD1-217ENST00000569429 KRT24Q2M2I5 525 aa8.53□□□□□ -1.04
HERPUD1-217ENST00000569429 SLC44A5Q8NCS7 719 aa8.53□□□□□ -1.04
HERPUD1-217ENST00000569429 GPRC5AQ8NFJ5 357 aa8.53□□□□□ -1.04
HERPUD1-217ENST00000569429 ANKS1AQ92625 1134 aa8.53□□□□□ -1.04
HERPUD1-217ENST00000569429 PLEKHF1Q96S99 279 aa8.53□□□□□ -1.04
HERPUD1-217ENST00000569429 TMEM39AQ9NV64 488 aa8.53□□□□□ -1.04
HERPUD1-217ENST00000569429 YBX2Q9Y2T7 364 aaKnown RBP8.53□□□□□ -1.04
HERPUD1-217ENST00000569429 ZNF292O60281 2723 aa8.53□□□□□ -1.04
HERPUD1-217ENST00000569429 ZNF521Q96K83 1311 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms