RNA–Protein interactions for RNA: ENST00000569288.1

LINC00555-201, long intergenic non-protein coding RNA 555, humanhuman

BASIC

Gene LINC00555, Length 442 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00555-201ENST00000569288 SWAP70Q9UH65 585 aa11.16□□□□□ -0.62
LINC00555-201ENST00000569288 TTF2Q9UNY4 1162 aaKnown RBP11.16□□□□□ -0.62
LINC00555-201ENST00000569288 DAGLAQ9Y4D2 1042 aa11.16□□□□□ -0.62
LINC00555-201ENST00000569288 TAF6LQ9Y6J9 622 aa11.16□□□□□ -0.62
LINC00555-201ENST00000569288 MYO5AQ9Y4I1 1855 aaKnown RBP11.15□□□□□ -0.62
LINC00555-201ENST00000569288 PSMD14O00487 310 aa11.15□□□□□ -0.62
LINC00555-201ENST00000569288 RAD17O75943 681 aa11.15□□□□□ -0.62
LINC00555-201ENST00000569288 VEGFAP15692 232 aaPredicted RBP11.15□□□□□ -0.62
LINC00555-201ENST00000569288 NOVP48745 357 aa11.15□□□□□ -0.62
LINC00555-201ENST00000569288 SCNN1DP51172 638 aa11.15□□□□□ -0.62
LINC00555-201ENST00000569288 ANTXR2P58335 489 aa11.15□□□□□ -0.62
LINC00555-201ENST00000569288 APOBEC3HQ6NTF7 200 aaKnown RBP11.15□□□□□ -0.62
LINC00555-201ENST00000569288 RSBN1LQ6PCB5 846 aaPredicted RBP11.15□□□□□ -0.62
LINC00555-201ENST00000569288 METTL16Q86W50 562 aaKnown RBP11.15□□□□□ -0.62
LINC00555-201ENST00000569288 TBC1D10CQ8IV04 446 aa11.15□□□□□ -0.62
LINC00555-201ENST00000569288 CERS5Q8N5B7 392 aa11.15□□□□□ -0.62
LINC00555-201ENST00000569288 GPBP1L1Q9HC44 474 aaPredicted RBP11.15□□□□□ -0.62
LINC00555-201ENST00000569288 KCNQ5Q9NR82 932 aa11.15□□□□□ -0.62
LINC00555-201ENST00000569288 GPRC5DQ9NZD1 345 aa11.15□□□□□ -0.62
LINC00555-201ENST00000569288 HDAC9Q9UKV0 1011 aa11.15□□□□□ -0.62
LINC00555-201ENST00000569288 COL2A1P02458 1487 aaPredicted RBP11.14□□□□□ -0.63
LINC00555-201ENST00000569288 MYH2Q9UKX2 1941 aa11.14□□□□□ -0.63
LINC00555-201ENST00000569288 GOLGA6L22H0YM25 854 aa11.14□□□□□ -0.63
LINC00555-201ENST00000569288 ENTPD3O75355 529 aa11.14□□□□□ -0.63
LINC00555-201ENST00000569288 CRKP46108 304 aa11.14□□□□□ -0.63
LINC00555-201ENST00000569288 HAND2P61296 217 aa11.14□□□□□ -0.63
LINC00555-201ENST00000569288 SKOR2Q2VWA4 1001 aaPredicted RBP11.14□□□□□ -0.63
LINC00555-201ENST00000569288 ATL3Q6DD88 541 aa11.14□□□□□ -0.63
LINC00555-201ENST00000569288 FOXP4Q8IVH2 680 aaPredicted RBP11.14□□□□□ -0.63
LINC00555-201ENST00000569288 TEX11Q8IYF3 940 aa11.14□□□□□ -0.63
LINC00555-201ENST00000569288 OGFOD1Q8N543 542 aa11.14□□□□□ -0.63
LINC00555-201ENST00000569288 SH3RF3Q8TEJ3 882 aaPredicted RBP11.14□□□□□ -0.63
LINC00555-201ENST00000569288 SDR42E1Q8WUS8 393 aa11.14□□□□□ -0.63
LINC00555-201ENST00000569288 CCDC17Q96LX7 622 aa11.14□□□□□ -0.63
LINC00555-201ENST00000569288 MCM9Q9NXL9 1143 aa11.14□□□□□ -0.63
LINC00555-201ENST00000569288 DDX11L8A8MPP1 907 aa11.13□□□□□ -0.63
LINC00555-201ENST00000569288 MINDY4BA8MYZ0 360 aa11.13□□□□□ -0.63
LINC00555-201ENST00000569288 IFIT3O14879 490 aaKnown RBP11.13□□□□□ -0.63
LINC00555-201ENST00000569288 KDM4AO75164 1064 aa11.13□□□□□ -0.63
LINC00555-201ENST00000569288 CPA1P15085 419 aa11.13□□□□□ -0.63
LINC00555-201ENST00000569288 SMARCA1P28370 1054 aa11.13□□□□□ -0.63
LINC00555-201ENST00000569288 LMOD1P29536 600 aaPredicted RBP11.13□□□□□ -0.63
LINC00555-201ENST00000569288 SEC23AQ15436 765 aa11.13□□□□□ -0.63
LINC00555-201ENST00000569288 DIXDC1Q155Q3 683 aa11.13□□□□□ -0.63
LINC00555-201ENST00000569288 GRIK5Q16478 980 aa11.13□□□□□ -0.63
LINC00555-201ENST00000569288 TMEM67Q5HYA8 995 aa11.13□□□□□ -0.63
LINC00555-201ENST00000569288 C16orf86Q6ZW13 317 aa11.13□□□□□ -0.63
LINC00555-201ENST00000569288 PNMA8AQ86V59 439 aaPredicted RBP11.13□□□□□ -0.63
LINC00555-201ENST00000569288 ZNF444Q8N0Y2 327 aaPredicted RBP11.13□□□□□ -0.63
LINC00555-201ENST00000569288 UBAC1Q9BSL1 405 aa11.13□□□□□ -0.63
LINC00555-201ENST00000569288 LY9Q9HBG7 655 aa11.13□□□□□ -0.63
LINC00555-201ENST00000569288 RBM27Q9P2N5 1060 aaKnown RBP11.13□□□□□ -0.63
LINC00555-201ENST00000569288 HACL1Q9UJ83 578 aa11.13□□□□□ -0.63
LINC00555-201ENST00000569288 SYNPO2Q9UMS6 1093 aa11.13□□□□□ -0.63
LINC00555-201ENST00000569288 SLC12A7Q9Y666 1083 aa11.13□□□□□ -0.63
LINC00555-201ENST00000569288 GJA3Q9Y6H8 435 aa11.13□□□□□ -0.63
LINC00555-201ENST00000569288 LAMA4Q16363 1823 aa11.13□□□□□ -0.63
LINC00555-201ENST00000569288 B4E1Z4 1266 aa11.12□□□□□ -0.63
LINC00555-201ENST00000569288 KIF3CO14782 793 aa11.12□□□□□ -0.63
LINC00555-201ENST00000569288 ZBTB43O43298 467 aa11.12□□□□□ -0.63
LINC00555-201ENST00000569288 STX6O43752 255 aa11.12□□□□□ -0.63
LINC00555-201ENST00000569288 WDHD1O75717 1129 aaPredicted RBP11.12□□□□□ -0.63
LINC00555-201ENST00000569288 DDAH1O94760 285 aa11.12□□□□□ -0.63
LINC00555-201ENST00000569288 POLR3DP05423 398 aaPredicted RBP11.12□□□□□ -0.63
LINC00555-201ENST00000569288 SYT1P21579 422 aa11.12□□□□□ -0.63
LINC00555-201ENST00000569288 MCM4P33991 863 aa11.12□□□□□ -0.63
LINC00555-201ENST00000569288 GMPSP49915 693 aaPredicted RBP11.12□□□□□ -0.63
LINC00555-201ENST00000569288 ZNF280AP59817 542 aaPredicted RBP11.12□□□□□ -0.63
LINC00555-201ENST00000569288 GABPAQ06546 454 aa11.12□□□□□ -0.63
LINC00555-201ENST00000569288 SCRN1Q12765 414 aa11.12□□□□□ -0.63
LINC00555-201ENST00000569288 WTAPQ15007 396 aa11.12□□□□□ -0.63
LINC00555-201ENST00000569288 NFKBIBQ15653 356 aa11.12□□□□□ -0.63
LINC00555-201ENST00000569288 APOA5Q6Q788 366 aa11.12□□□□□ -0.63
LINC00555-201ENST00000569288 USP50Q70EL3 339 aaPredicted RBP11.12□□□□□ -0.63
LINC00555-201ENST00000569288 CYB5R4Q7L1T6 521 aa11.12□□□□□ -0.63
LINC00555-201ENST00000569288 TGFBRAP1Q8WUH2 860 aa11.12□□□□□ -0.63
LINC00555-201ENST00000569288 WASF1Q92558 559 aa11.12□□□□□ -0.63
LINC00555-201ENST00000569288 TNPO1Q92973 898 aaKnown RBP11.12□□□□□ -0.63
LINC00555-201ENST00000569288 ZSCAN10Q96SZ4 725 aaPredicted RBP11.12□□□□□ -0.63
LINC00555-201ENST00000569288 ZSCAN16Q9H4T2 348 aaPredicted RBP11.12□□□□□ -0.63
LINC00555-201ENST00000569288 TAF1DQ9H5J8 278 aaPredicted RBP11.12□□□□□ -0.63
LINC00555-201ENST00000569288 RRAGCQ9HB90 399 aa11.12□□□□□ -0.63
LINC00555-201ENST00000569288 NMRK2Q9NPI5 230 aa11.12□□□□□ -0.63
LINC00555-201ENST00000569288 USP40Q9NVE5 1235 aa11.12□□□□□ -0.63
LINC00555-201ENST00000569288 RBM28Q9NW13 759 aaKnown RBP11.12□□□□□ -0.63
LINC00555-201ENST00000569288 CNOT7Q9UIV1 285 aaKnown RBP11.12□□□□□ -0.63
LINC00555-201ENST00000569288 FLT1P17948 1338 aa11.11□□□□□ -0.63
LINC00555-201ENST00000569288 STK36Q9NRP7 1315 aa11.11□□□□□ -0.63
LINC00555-201ENST00000569288 CCDC69A6NI79 296 aa11.11□□□□□ -0.63
LINC00555-201ENST00000569288 H7C1D1 291 aa11.11□□□□□ -0.63
LINC00555-201ENST00000569288 USP17L8P0C7I0 530 aa11.11□□□□□ -0.63
LINC00555-201ENST00000569288 ZSCAN22P10073 491 aaPredicted RBP11.11□□□□□ -0.63
LINC00555-201ENST00000569288 IFNAR1P17181 557 aa11.11□□□□□ -0.63
LINC00555-201ENST00000569288 GJB2P29033 226 aa11.11□□□□□ -0.63
LINC00555-201ENST00000569288 EPHX2P34913 555 aa11.11□□□□□ -0.63
LINC00555-201ENST00000569288 GNAQP50148 359 aa11.11□□□□□ -0.63
LINC00555-201ENST00000569288 CTDSPL2Q05D32 466 aa11.11□□□□□ -0.63
LINC00555-201ENST00000569288 CSPP1Q1MSJ5 1256 aa11.11□□□□□ -0.63
LINC00555-201ENST00000569288 LARP1BQ659C4 914 aaKnown RBP11.11□□□□□ -0.63
LINC00555-201ENST00000569288 CDC42EP5Q6NZY7 148 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms