RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 KLHL29Q96CT2 875 aa7.9□□□□□ -1.14
CNOT1-216ENST00000569240 BICD1Q96G01 975 aa7.9□□□□□ -1.14
CNOT1-216ENST00000569240 DBF4Q9UBU7 674 aaPredicted RBP7.9□□□□□ -1.14
CNOT1-216ENST00000569240 TLDC2A0PJX2 215 aa7.9□□□□□ -1.15
CNOT1-216ENST00000569240 SPECC1L-ADORA2AF8WAN1 911 aa7.9□□□□□ -1.15
CNOT1-216ENST00000569240 UQCRFS1P1P0C7P4 283 aa7.9□□□□□ -1.15
CNOT1-216ENST00000569240 ANO1Q5XXA6 986 aa7.9□□□□□ -1.15
CNOT1-216ENST00000569240 MRPL50Q8N5N7 158 aaKnown RBP7.9□□□□□ -1.15
CNOT1-216ENST00000569240 REREQ9P2R6 1566 aa7.9□□□□□ -1.15
CNOT1-216ENST00000569240 SYNJ2O15056 1496 aa7.9□□□□□ -1.15
CNOT1-216ENST00000569240 KRT13P13646 458 aa7.9□□□□□ -1.15
CNOT1-216ENST00000569240 IL9RQ01113 521 aa7.9□□□□□ -1.15
CNOT1-216ENST00000569240 GRAMD1AQ96CP6 724 aa7.9□□□□□ -1.15
CNOT1-216ENST00000569240 NRBF2Q96F24 287 aa7.9□□□□□ -1.15
CNOT1-216ENST00000569240 SYNRGQ9UMZ2 1314 aa7.9□□□□□ -1.15
CNOT1-216ENST00000569240 IFIT3O14879 490 aaKnown RBP7.89□□□□□ -1.15
CNOT1-216ENST00000569240 SEMA3EO15041 775 aa7.89□□□□□ -1.15
CNOT1-216ENST00000569240 GSTA2P09210 222 aa7.89□□□□□ -1.15
CNOT1-216ENST00000569240 CC2D1AQ6P1N0 951 aaPredicted RBP7.89□□□□□ -1.15
CNOT1-216ENST00000569240 PANX2Q96RD6 677 aa7.89□□□□□ -1.15
CNOT1-216ENST00000569240 OPHN1O60890 802 aa7.89□□□□□ -1.15
CNOT1-216ENST00000569240 GNAT2P19087 354 aa7.89□□□□□ -1.15
CNOT1-216ENST00000569240 MAGEA1P43355 309 aa7.89□□□□□ -1.15
CNOT1-216ENST00000569240 CASP8Q14790 479 aa7.89□□□□□ -1.15
CNOT1-216ENST00000569240 CNNM4Q6P4Q7 775 aa7.89□□□□□ -1.15
CNOT1-216ENST00000569240 KLHDC4Q8TBB5 520 aa7.89□□□□□ -1.15
CNOT1-216ENST00000569240 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.89□□□□□ -1.15
CNOT1-216ENST00000569240 NUTM2BA6NNL0 878 aaPredicted RBP7.89□□□□□ -1.15
CNOT1-216ENST00000569240 GNAT3A8MTJ3 354 aa7.89□□□□□ -1.15
CNOT1-216ENST00000569240 NUTM2EB1AL46 878 aaPredicted RBP7.89□□□□□ -1.15
CNOT1-216ENST00000569240 KRT9P35527 623 aa7.89□□□□□ -1.15
CNOT1-216ENST00000569240 DNM2P50570 870 aa7.89□□□□□ -1.15
CNOT1-216ENST00000569240 SPTY2D1Q68D10 685 aaPredicted RBP7.89□□□□□ -1.15
CNOT1-216ENST00000569240 ARHGEF18Q6ZSZ5 1173 aa7.89□□□□□ -1.15
CNOT1-216ENST00000569240 ANKRD2Q9GZV1 360 aa7.89□□□□□ -1.15
CNOT1-216ENST00000569240 RNF216Q9NWF9 866 aaPredicted RBP7.89□□□□□ -1.15
CNOT1-216ENST00000569240 CORO7P57737 925 aa7.89□□□□□ -1.15
CNOT1-216ENST00000569240 NR1H3Q13133 447 aa7.89□□□□□ -1.15
CNOT1-216ENST00000569240 XPO4Q9C0E2 1151 aaKnown RBP7.89□□□□□ -1.15
CNOT1-216ENST00000569240 ZHX3Q9H4I2 956 aa7.89□□□□□ -1.15
CNOT1-216ENST00000569240 FLIIQ13045 1269 aa7.89□□□□□ -1.15
CNOT1-216ENST00000569240 BPIFA3Q9BQP9 254 aa7.89□□□□□ -1.15
CNOT1-216ENST00000569240 OSBPL5Q9H0X9 879 aaPredicted RBP7.89□□□□□ -1.15
CNOT1-216ENST00000569240 TPX2Q9ULW0 747 aaKnown RBP7.89□□□□□ -1.15
CNOT1-216ENST00000569240 CLTAP09496 248 aa7.89□□□□□ -1.15
CNOT1-216ENST00000569240 NOP14P78316 857 aaKnown RBP7.89□□□□□ -1.15
CNOT1-216ENST00000569240 NNTQ13423 1086 aa7.89□□□□□ -1.15
CNOT1-216ENST00000569240 KCNH3Q9ULD8 1083 aa7.89□□□□□ -1.15
CNOT1-216ENST00000569240 A0A1B0GVL5 298 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 PTPDC1A2A3K4 754 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 STXBP3O00186 592 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 DCTN3O75935 186 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 USP5P45974 858 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 PDE6CP51160 858 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 TBC1D8BQ0IIM8 1120 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 C10orf76Q5T2E6 689 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 RCSD1Q6JBY9 416 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 NLRP7Q8WX94 980 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 ZWINTO95229 277 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 CMA1P23946 247 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 CREB3L3Q68CJ9 461 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 SULT6B1Q6IMI4 303 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 PPP1R2P3Q6NXS1 205 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 TMED8Q6PL24 325 aaPredicted RBP7.88□□□□□ -1.15
CNOT1-216ENST00000569240 HNRNPLLQ8WVV9 542 aaKnown RBP7.88□□□□□ -1.15
CNOT1-216ENST00000569240 THOC1Q96FV9 657 aaKnown RBP7.88□□□□□ -1.15
CNOT1-216ENST00000569240 TMEM87BQ96K49 555 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 EFHD1Q9BUP0 239 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 HELLSQ9NRZ9 838 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 TEX14Q8IWB6 1497 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 RPS6KB1P23443 525 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 IFT88Q13099 833 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 PAK1Q13153 545 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 CNNM1Q9NRU3 951 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 ATP6V0A2Q9Y487 856 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 NFE2L3Q9Y4A8 694 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 BZW2Q9Y6E2 419 aaKnown RBP7.88□□□□□ -1.15
CNOT1-216ENST00000569240 TRHP20396 242 aaPredicted RBP7.88□□□□□ -1.15
CNOT1-216ENST00000569240 CFAP70Q5T0N1 1121 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 PARP9Q8IXQ6 854 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 ANKRD35Q8N283 1001 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 ZNF148Q9UQR1 794 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 KLF18A0A0U1RQI7 1052 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 MYL1P05976 194 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 PHBP35232 272 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 TMEM67Q5HYA8 995 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 PARD6BQ9BYG5 372 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 RASGRF2O14827 1237 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 ESRRBO95718 433 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 MAP3K7CLP57077 242 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 GLT8D2Q9H1C3 349 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 PYCARDQ9ULZ3 195 aa7.88□□□□□ -1.15
CNOT1-216ENST00000569240 DIS3Q9Y2L1 958 aaKnown RBP7.88□□□□□ -1.15
CNOT1-216ENST00000569240 FOXP2O15409 715 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 SEC24BO95487 1268 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 GFAPP14136 432 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 PAF1Q8N7H5 531 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 CATSPER1Q8NEC5 780 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 KIFC3Q9BVG8 833 aa7.87□□□□□ -1.15
CNOT1-216ENST00000569240 SLC12A5Q9H2X9 1139 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms