RNA–Protein interactions for RNA: ENST00000568936.1

CCNDBP1-214, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 2,088 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-214ENST00000568936 SEC23AQ15436 765 aa13.65□□□□□ -0.22
CCNDBP1-214ENST00000568936 TMEM67Q5HYA8 995 aa13.65□□□□□ -0.22
CCNDBP1-214ENST00000568936 CLEC17AQ6ZS10 378 aa13.65□□□□□ -0.22
CCNDBP1-214ENST00000568936 SMARCC2Q8TAQ2 1214 aa13.65□□□□□ -0.22
CCNDBP1-214ENST00000568936 TEKT1Q969V4 418 aa13.65□□□□□ -0.22
CCNDBP1-214ENST00000568936 MYL10Q9BUA6 226 aa13.65□□□□□ -0.22
CCNDBP1-214ENST00000568936 PSMD14O00487 310 aa13.65□□□□□ -0.22
CCNDBP1-214ENST00000568936 ORC4O43929 436 aa13.65□□□□□ -0.22
CCNDBP1-214ENST00000568936 PLCG2P16885 1265 aa13.65□□□□□ -0.22
CCNDBP1-214ENST00000568936 IARSP41252 1262 aaKnown RBP13.65□□□□□ -0.22
CCNDBP1-214ENST00000568936 FAM47AQ5JRC9 791 aa13.65□□□□□ -0.22
CCNDBP1-214ENST00000568936 APOA5Q6Q788 366 aa13.65□□□□□ -0.22
CCNDBP1-214ENST00000568936 SGMS1Q86VZ5 419 aa13.65□□□□□ -0.22
CCNDBP1-214ENST00000568936 USP40Q9NVE5 1235 aa13.65□□□□□ -0.22
CCNDBP1-214ENST00000568936 ROBO3Q96MS0 1386 aa13.65□□□□□ -0.22
CCNDBP1-214ENST00000568936 UTRNP46939 3433 aa13.64□□□□□ -0.23
CCNDBP1-214ENST00000568936 GOLGA8BA8MQT2 603 aa13.64□□□□□ -0.23
CCNDBP1-214ENST00000568936 TRAK2O60296 914 aa13.64□□□□□ -0.23
CCNDBP1-214ENST00000568936 RANBP6O60518 1105 aaKnown RBP13.64□□□□□ -0.23
CCNDBP1-214ENST00000568936 NMT2O60551 498 aa13.64□□□□□ -0.23
CCNDBP1-214ENST00000568936 LIFRP42702 1097 aa13.64□□□□□ -0.23
CCNDBP1-214ENST00000568936 NFIAQ12857 509 aa13.64□□□□□ -0.23
CCNDBP1-214ENST00000568936 PICALMQ13492 652 aa13.64□□□□□ -0.23
CCNDBP1-214ENST00000568936 SOGA3Q5TF21 947 aa13.64□□□□□ -0.23
CCNDBP1-214ENST00000568936 ZFPM1Q8IX07 1006 aa13.64□□□□□ -0.23
CCNDBP1-214ENST00000568936 DDX11Q96FC9 970 aa13.64□□□□□ -0.23
CCNDBP1-214ENST00000568936 ZDHHC15Q96MV8 337 aa13.64□□□□□ -0.23
CCNDBP1-214ENST00000568936 GMLQ99445 158 aa13.64□□□□□ -0.23
CCNDBP1-214ENST00000568936 FAM217BQ9NTX9 383 aaPredicted RBP13.64□□□□□ -0.23
CCNDBP1-214ENST00000568936 ZBTB12Q9Y330 459 aaPredicted RBP13.64□□□□□ -0.23
CCNDBP1-214ENST00000568936 SIPA1L1O43166 1804 aa13.64□□□□□ -0.23
CCNDBP1-214ENST00000568936 BAG4O95429 457 aaKnown RBP13.63□□□□□ -0.23
CCNDBP1-214ENST00000568936 VIL1P09327 827 aaKnown RBP13.63□□□□□ -0.23
CCNDBP1-214ENST00000568936 SLURP2P0DP57 97 aa13.63□□□□□ -0.23
CCNDBP1-214ENST00000568936 CACNB3P54284 484 aa13.63□□□□□ -0.23
CCNDBP1-214ENST00000568936 CERS3Q8IU89 383 aa13.63□□□□□ -0.23
CCNDBP1-214ENST00000568936 ESR2Q92731 530 aa13.63□□□□□ -0.23
CCNDBP1-214ENST00000568936 MRIQ9BWK5 157 aa13.63□□□□□ -0.23
CCNDBP1-214ENST00000568936 TCHHQ07283 1943 aa13.63□□□□□ -0.23
CCNDBP1-214ENST00000568936 TNKSO95271 1327 aa13.63□□□□□ -0.23
CCNDBP1-214ENST00000568936 STX6O43752 255 aa13.63□□□□□ -0.23
CCNDBP1-214ENST00000568936 POLR3DP05423 398 aaPredicted RBP13.63□□□□□ -0.23
CCNDBP1-214ENST00000568936 FDPSP14324 419 aaKnown RBP13.63□□□□□ -0.23
CCNDBP1-214ENST00000568936 CDC27P30260 824 aa13.63□□□□□ -0.23
CCNDBP1-214ENST00000568936 RASSF7Q02833 373 aa13.63□□□□□ -0.23
CCNDBP1-214ENST00000568936 RSBN1LQ6PCB5 846 aaPredicted RBP13.63□□□□□ -0.23
CCNDBP1-214ENST00000568936 CCDC144CPQ8IYA2 1237 aa13.63□□□□□ -0.23
CCNDBP1-214ENST00000568936 ENAHQ8N8S7 591 aaPredicted RBP13.63□□□□□ -0.23
CCNDBP1-214ENST00000568936 TAOK3Q9H2K8 898 aa13.63□□□□□ -0.23
CCNDBP1-214ENST00000568936 ZNRF3Q9ULT6 936 aa13.63□□□□□ -0.23
CCNDBP1-214ENST00000568936 MTMR6Q9Y217 621 aa13.63□□□□□ -0.23
CCNDBP1-214ENST00000568936 PTPDC1A2A3K4 754 aa13.62□□□□□ -0.23
CCNDBP1-214ENST00000568936 ADD1P35611 737 aaKnown RBP13.62□□□□□ -0.23
CCNDBP1-214ENST00000568936 HDLBPQ00341 1268 aaKnown RBP13.62□□□□□ -0.23
CCNDBP1-214ENST00000568936 CXCL9Q07325 125 aa13.62□□□□□ -0.23
CCNDBP1-214ENST00000568936 VPS33BQ9H267 617 aa13.62□□□□□ -0.23
CCNDBP1-214ENST00000568936 PCP11498 1178 aaKnown RBP13.62□□□□□ -0.23
CCNDBP1-214ENST00000568936 WTAPQ15007 396 aa13.62□□□□□ -0.23
CCNDBP1-214ENST00000568936 MICU3Q86XE3 530 aa13.62□□□□□ -0.23
CCNDBP1-214ENST00000568936 NIM1KQ8IY84 436 aa13.62□□□□□ -0.23
CCNDBP1-214ENST00000568936 PRMT6Q96LA8 375 aaPredicted RBP13.62□□□□□ -0.23
CCNDBP1-214ENST00000568936 ZSCAN10Q96SZ4 725 aaPredicted RBP13.62□□□□□ -0.23
CCNDBP1-214ENST00000568936 LLPHQ9BRT6 129 aaKnown RBP13.62□□□□□ -0.23
CCNDBP1-214ENST00000568936 SPON1Q9HCB6 807 aa13.62□□□□□ -0.23
CCNDBP1-214ENST00000568936 IL17RBQ9NRM6 502 aa13.62□□□□□ -0.23
CCNDBP1-214ENST00000568936 SERPINA10Q9UK55 444 aa13.62□□□□□ -0.23
CCNDBP1-214ENST00000568936 GOLGA6L22H0YM25 854 aa13.61□□□□□ -0.23
CCNDBP1-214ENST00000568936 ZSCAN22P10073 491 aaPredicted RBP13.61□□□□□ -0.23
CCNDBP1-214ENST00000568936 RASA1P20936 1047 aa13.61□□□□□ -0.23
CCNDBP1-214ENST00000568936 RBM5P52756 815 aaKnown RBP eCLIP13.61□□□□□ -0.23
CCNDBP1-214ENST00000568936 PDE4BQ07343 736 aa13.61□□□□□ -0.23
CCNDBP1-214ENST00000568936 SKOR2Q2VWA4 1001 aaPredicted RBP13.61□□□□□ -0.23
CCNDBP1-214ENST00000568936 CFAP100Q494V2 611 aa13.61□□□□□ -0.23
CCNDBP1-214ENST00000568936 LARP1BQ659C4 914 aaKnown RBP13.61□□□□□ -0.23
CCNDBP1-214ENST00000568936 RCSD1Q6JBY9 416 aa13.61□□□□□ -0.23
CCNDBP1-214ENST00000568936 NFXL1Q6ZNB6 911 aa13.61□□□□□ -0.23
CCNDBP1-214ENST00000568936 FAM198AQ9UFP1 575 aa13.61□□□□□ -0.23
CCNDBP1-214ENST00000568936 SRCAPQ6ZRS2 3230 aa13.61□□□□□ -0.23
CCNDBP1-214ENST00000568936 SHTN1A0MZ66 631 aa13.6□□□□□ -0.23
CCNDBP1-214ENST00000568936 CDK8P49336 464 aa13.6□□□□□ -0.23
CCNDBP1-214ENST00000568936 NTRK3Q16288 839 aa13.6□□□□□ -0.23
CCNDBP1-214ENST00000568936 FOXD4L6Q3SYB3 417 aaPredicted RBP13.6□□□□□ -0.23
CCNDBP1-214ENST00000568936 FOXD4L3Q6VB84 417 aaPredicted RBP13.6□□□□□ -0.23
CCNDBP1-214ENST00000568936 C16orf86Q6ZW13 317 aa13.6□□□□□ -0.23
CCNDBP1-214ENST00000568936 CDC37L1Q7L3B6 337 aa13.6□□□□□ -0.23
CCNDBP1-214ENST00000568936 UBAC1Q9BSL1 405 aa13.6□□□□□ -0.23
CCNDBP1-214ENST00000568936 MTA3Q9BTC8 594 aa13.6□□□□□ -0.23
CCNDBP1-214ENST00000568936 OSBPL5Q9H0X9 879 aaPredicted RBP13.6□□□□□ -0.23
CCNDBP1-214ENST00000568936 TDRD3Q9H7E2 651 aaKnown RBP13.6□□□□□ -0.23
CCNDBP1-214ENST00000568936 MYH8P13535 1937 aa13.6□□□□□ -0.23
CCNDBP1-214ENST00000568936 WDR33Q9C0J8 1336 aaKnown RBP13.6□□□□□ -0.23
CCNDBP1-214ENST00000568936 CCDC69A6NI79 296 aa13.6□□□□□ -0.23
CCNDBP1-214ENST00000568936 UBE2Q2LH0YL09 131 aa13.6□□□□□ -0.23
CCNDBP1-214ENST00000568936 ZBTB43O43298 467 aa13.6□□□□□ -0.23
CCNDBP1-214ENST00000568936 SLC3A2P08195 630 aaKnown RBP13.6□□□□□ -0.23
CCNDBP1-214ENST00000568936 METAP2P50579 478 aaKnown RBP eCLIP13.6□□□□□ -0.23
CCNDBP1-214ENST00000568936 TFAP4Q01664 338 aa13.6□□□□□ -0.23
CCNDBP1-214ENST00000568936 GABPAQ06546 454 aa13.6□□□□□ -0.23
CCNDBP1-214ENST00000568936 L1TD1Q5T7N2 865 aaKnown RBP13.6□□□□□ -0.23
CCNDBP1-214ENST00000568936 FHDC1Q9C0D6 1143 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms