RNA–Protein interactions for RNA: ENST00000568740.5

TCF4-241, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-241ENST00000568740 INTS4Q96HW7 963 aaKnown RBP10.05□□□□□ -0.8
TCF4-241ENST00000568740 TANGO6Q9C0B7 1094 aa10.05□□□□□ -0.8
TCF4-241ENST00000568740 PIF1Q9H611 641 aa10.05□□□□□ -0.8
TCF4-241ENST00000568740 GNL3LQ9NVN8 582 aaKnown RBP10.05□□□□□ -0.8
TCF4-241ENST00000568740 RREB1Q92766 1687 aa10.05□□□□□ -0.8
TCF4-241ENST00000568740 RTL9Q8NET4 1388 aa10.05□□□□□ -0.8
TCF4-241ENST00000568740 FIBPO43427 364 aa10.04□□□□□ -0.8
TCF4-241ENST00000568740 EXOSC10Q01780 885 aaKnown RBP10.04□□□□□ -0.8
TCF4-241ENST00000568740 KRT32Q14532 448 aa10.04□□□□□ -0.8
TCF4-241ENST00000568740 DOK7Q18PE1 504 aa10.04□□□□□ -0.8
TCF4-241ENST00000568740 RALYLQ86SE5 291 aaKnown RBP10.04□□□□□ -0.8
TCF4-241ENST00000568740 CMTR1Q8N1G2 835 aaKnown RBP10.04□□□□□ -0.8
TCF4-241ENST00000568740 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.04□□□□□ -0.8
TCF4-241ENST00000568740 MAF1Q9H063 256 aa10.04□□□□□ -0.8
TCF4-241ENST00000568740 TFIP11Q9UBB9 837 aaKnown RBP10.04□□□□□ -0.8
TCF4-241ENST00000568740 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.04□□□□□ -0.8
TCF4-241ENST00000568740 TAF1LQ8IZX4 1826 aa10.04□□□□□ -0.8
TCF4-241ENST00000568740 PNPLA7Q6ZV29 1317 aa10.04□□□□□ -0.8
TCF4-241ENST00000568740 TNRC6CQ9HCJ0 1690 aaKnown RBP10.04□□□□□ -0.8
TCF4-241ENST00000568740 CEBPZQ03701 1054 aaKnown RBP10.04□□□□□ -0.8
TCF4-241ENST00000568740 DNM1Q05193 864 aaKnown RBP10.04□□□□□ -0.8
TCF4-241ENST00000568740 NAA16Q6N069 864 aaPredicted RBP10.04□□□□□ -0.8
TCF4-241ENST00000568740 CAVIN1Q6NZI2 390 aaKnown RBP10.04□□□□□ -0.8
TCF4-241ENST00000568740 KCNQ5Q9NR82 932 aa10.04□□□□□ -0.8
TCF4-241ENST00000568740 LMBRD1Q9NUN5 540 aa10.04□□□□□ -0.8
TCF4-241ENST00000568740 MAGEB6P1A0A0J9YX57 407 aa10.03□□□□□ -0.8
TCF4-241ENST00000568740 PLSCR1O15162 318 aa10.03□□□□□ -0.8
TCF4-241ENST00000568740 CYP2D6P10635 497 aa10.03□□□□□ -0.8
TCF4-241ENST00000568740 C7P10643 843 aa10.03□□□□□ -0.8
TCF4-241ENST00000568740 BCORQ6W2J9 1755 aa10.03□□□□□ -0.8
TCF4-241ENST00000568740 RFX7Q2KHR2 1363 aa10.03□□□□□ -0.8
TCF4-241ENST00000568740 KLF18A0A0U1RQI7 1052 aa10.03□□□□□ -0.8
TCF4-241ENST00000568740 DDX11L8A8MPP1 907 aa10.03□□□□□ -0.8
TCF4-241ENST00000568740 CTDNEP1O95476 244 aa10.03□□□□□ -0.8
TCF4-241ENST00000568740 PDIA3P30101 505 aaKnown RBP10.03□□□□□ -0.8
TCF4-241ENST00000568740 MAMSTRQ6ZN01 415 aa10.03□□□□□ -0.8
TCF4-241ENST00000568740 GPT2Q8TD30 523 aa10.03□□□□□ -0.8
TCF4-241ENST00000568740 ZSWIM5Q9P217 1185 aa10.03□□□□□ -0.8
TCF4-241ENST00000568740 CTNNA3Q9UI47 895 aa10.03□□□□□ -0.8
TCF4-241ENST00000568740 G3BP2Q9UN86 482 aaKnown RBP10.03□□□□□ -0.8
TCF4-241ENST00000568740 LY75O60449 1722 aa10.03□□□□□ -0.8
TCF4-241ENST00000568740 ANKRD33BA6NCL7 494 aa10.03□□□□□ -0.8
TCF4-241ENST00000568740 ZSCAN22P10073 491 aaPredicted RBP10.03□□□□□ -0.8
TCF4-241ENST00000568740 ADD1P35611 737 aaKnown RBP10.03□□□□□ -0.8
TCF4-241ENST00000568740 TCEAL1Q15170 157 aa10.03□□□□□ -0.8
TCF4-241ENST00000568740 L1TD1Q5T7N2 865 aaKnown RBP10.03□□□□□ -0.8
TCF4-241ENST00000568740 MICU3Q86XE3 530 aa10.03□□□□□ -0.8
TCF4-241ENST00000568740 NCOA7Q8NI08 942 aa10.03□□□□□ -0.8
TCF4-241ENST00000568740 GTF3C6Q969F1 213 aa10.03□□□□□ -0.8
TCF4-241ENST00000568740 NSUN4Q96CB9 384 aaKnown RBP10.03□□□□□ -0.8
TCF4-241ENST00000568740 ZSCAN31Q96LW9 406 aaPredicted RBP10.03□□□□□ -0.8
TCF4-241ENST00000568740 ANKRD2Q9GZV1 360 aa10.03□□□□□ -0.8
TCF4-241ENST00000568740 MTMR6Q9Y217 621 aa10.03□□□□□ -0.8
TCF4-241ENST00000568740 C4AP0C0L4 1744 aa10.02□□□□□ -0.8
TCF4-241ENST00000568740 TRDNQ13061 729 aa10.02□□□□□ -0.81
TCF4-241ENST00000568740 USP48Q86UV5 1035 aa10.02□□□□□ -0.81
TCF4-241ENST00000568740 GAS2L3Q86XJ1 694 aa10.02□□□□□ -0.81
TCF4-241ENST00000568740 MB21D2Q8IYB1 491 aaPredicted RBP10.02□□□□□ -0.81
TCF4-241ENST00000568740 RBM17Q96I25 401 aaKnown RBP10.02□□□□□ -0.81
TCF4-241ENST00000568740 AIFM3Q96NN9 605 aa10.02□□□□□ -0.81
TCF4-241ENST00000568740 PPP1R12CQ9BZL4 782 aa10.02□□□□□ -0.81
TCF4-241ENST00000568740 FTOQ9C0B1 505 aaKnown RBP eCLIP10.02□□□□□ -0.81
TCF4-241ENST00000568740 SH2B1Q9NRF2 756 aaPredicted RBP10.02□□□□□ -0.81
TCF4-241ENST00000568740 GOLGA8BA8MQT2 603 aa10.02□□□□□ -0.81
TCF4-241ENST00000568740 USP17L12C9JPN9 530 aa10.02□□□□□ -0.81
TCF4-241ENST00000568740 USP17L21D6R901 530 aa10.02□□□□□ -0.81
TCF4-241ENST00000568740 GOLGA6L22H0YM25 854 aa10.02□□□□□ -0.81
TCF4-241ENST00000568740 SLURP2P0DP57 97 aa10.02□□□□□ -0.81
TCF4-241ENST00000568740 MCM5P33992 734 aa10.02□□□□□ -0.81
TCF4-241ENST00000568740 ANKRD1Q15327 319 aa10.02□□□□□ -0.81
TCF4-241ENST00000568740 CRY2Q49AN0 593 aa10.02□□□□□ -0.81
TCF4-241ENST00000568740 PHLDB3Q6NSJ2 640 aa10.02□□□□□ -0.81
TCF4-241ENST00000568740 TSHZ1Q6ZSZ6 1077 aa10.02□□□□□ -0.81
TCF4-241ENST00000568740 DZIP1Q86YF9 867 aaKnown RBP10.02□□□□□ -0.81
TCF4-241ENST00000568740 RIOK1Q9BRS2 568 aaKnown RBP10.02□□□□□ -0.81
TCF4-241ENST00000568740 PARP3Q9Y6F1 533 aa10.02□□□□□ -0.81
TCF4-241ENST00000568740 XDHP47989 1333 aa10.01□□□□□ -0.81
TCF4-241ENST00000568740 NMT2O60551 498 aa10.01□□□□□ -0.81
TCF4-241ENST00000568740 F13A1P00488 732 aa10.01□□□□□ -0.81
TCF4-241ENST00000568740 NFXL1Q6ZNB6 911 aa10.01□□□□□ -0.81
TCF4-241ENST00000568740 TBC1D16Q8TBP0 767 aa10.01□□□□□ -0.81
TCF4-241ENST00000568740 PHKBQ93100 1093 aa10.01□□□□□ -0.81
TCF4-241ENST00000568740 GGA1Q9UJY5 639 aa10.01□□□□□ -0.81
TCF4-241ENST00000568740 SCN7AQ01118 1682 aa10.01□□□□□ -0.81
TCF4-241ENST00000568740 LRP5O75197 1615 aa10.01□□□□□ -0.81
TCF4-241ENST00000568740 WDR33Q9C0J8 1336 aaKnown RBP10.01□□□□□ -0.81
TCF4-241ENST00000568740 hCG_1642624A0A1W2PR95 340 aa10.01□□□□□ -0.81
TCF4-241ENST00000568740 PTPDC1A2A3K4 754 aa10.01□□□□□ -0.81
TCF4-241ENST00000568740 USP17L8P0C7I0 530 aa10.01□□□□□ -0.81
TCF4-241ENST00000568740 GTF2IP78347 998 aa10.01□□□□□ -0.81
TCF4-241ENST00000568740 FAM47AQ5JRC9 791 aa10.01□□□□□ -0.81
TCF4-241ENST00000568740 CD209Q9NNX6 404 aa10.01□□□□□ -0.81
TCF4-241ENST00000568740 SAP30BPQ9UHR5 308 aaKnown RBP10.01□□□□□ -0.81
TCF4-241ENST00000568740 PPEF1O14829 653 aaPredicted RBP10□□□□□ -0.81
TCF4-241ENST00000568740 SRGNP10124 158 aa10□□□□□ -0.81
TCF4-241ENST00000568740 LMOD1P29536 600 aaPredicted RBP10□□□□□ -0.81
TCF4-241ENST00000568740 RFC5P40937 340 aa10□□□□□ -0.81
TCF4-241ENST00000568740 CAMK2BQ13554 666 aa10□□□□□ -0.81
TCF4-241ENST00000568740 MFSD6Q6ZSS7 791 aa10□□□□□ -0.81
TCF4-241ENST00000568740 FAM184AQ8NB25 1140 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms