RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 ZHX3Q9H4I2 956 aa12.3□□□□□ -0.44
PALB2-206ENST00000568219 CYLC1P35663 651 aaPredicted RBP12.29□□□□□ -0.44
PALB2-206ENST00000568219 GUCY2FP51841 1108 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 SLC7A5Q01650 507 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 AKAP4Q5JQC9 854 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 PI16Q6UXB8 463 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 FCHSD1Q86WN1 690 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 NOA1Q8NC60 698 aaKnown RBP12.29□□□□□ -0.44
PALB2-206ENST00000568219 MMRN2Q9H8L6 949 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 LRP2BPQ9P2M1 347 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 FAM169AQ9Y6X4 670 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 NEURL1BA8MQ27 555 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 CLSTN1O94985 981 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 TUBBP07437 444 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 TATP17735 454 aaPredicted RBP12.29□□□□□ -0.44
PALB2-206ENST00000568219 GGCXP38435 758 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 EPS15P42566 896 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 PDE4BQ07343 736 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 AMOTQ4VCS5 1084 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 MMS22LQ6ZRQ5 1243 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 MFSD6Q6ZSS7 791 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 AATKQ6ZMQ8 1374 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 TULP2O00295 520 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 HGSO14964 777 aaPredicted RBP12.29□□□□□ -0.44
PALB2-206ENST00000568219 RNMTO43148 476 aaKnown RBP12.29□□□□□ -0.44
PALB2-206ENST00000568219 E2F5Q15329 346 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 WHAMMP3Q1A5X7 153 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 CCDC121Q6ZUS5 278 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 KLHL34Q8N239 644 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 SMARCC2Q8TAQ2 1214 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 HAUS7Q99871 368 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 CDC42BPBQ9Y5S2 1711 aa12.29□□□□□ -0.44
PALB2-206ENST00000568219 RNF17Q9BXT8 1623 aaKnown RBP12.29□□□□□ -0.44
PALB2-206ENST00000568219 RAD21O60216 631 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 PDE6BP35913 854 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 NLRP5P59047 1200 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 NR5A1Q13285 461 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 IFIT5Q13325 482 aaKnown RBP12.28□□□□□ -0.44
PALB2-206ENST00000568219 WTAPQ15007 396 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 PTPROQ16827 1216 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 LRRC24Q50LG9 513 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 CCDC93Q567U6 631 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 MCTP2Q6DN12 878 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 JAKMIP2Q96AA8 810 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 TFR2Q9UP52 801 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 ADGRG1Q9Y653 693 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 RPSAP08865 295 aaKnown RBP12.28□□□□□ -0.44
PALB2-206ENST00000568219 MCM7P33993 719 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 ZAP70P43403 619 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 IFFO1Q0D2I5 559 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 SHC4Q6S5L8 630 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 GOPCQ9HD26 462 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 INCENPQ9NQS7 918 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 EPN1Q9Y6I3 576 aaPredicted RBP12.28□□□□□ -0.44
PALB2-206ENST00000568219 ABCC3O15438 1527 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 IL15P40933 162 aaPredicted RBP12.28□□□□□ -0.44
PALB2-206ENST00000568219 CYP27A1Q02318 531 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 OSBP2Q969R2 916 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 NCAPGQ9BPX3 1015 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 DSCC1Q9BVC3 393 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 SMIM23A6NLE4 172 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 NEBLO76041 1014 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 PRR29P0C7W0 189 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 VAV2P52735 878 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 TUBB4BP68371 445 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 KRT83P78385 493 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 CTDSPL2Q05D32 466 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 FMR1Q06787 632 aaKnown RBP eCLIP12.28□□□□□ -0.44
PALB2-206ENST00000568219 PDCLQ13371 301 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 AKAP2Q9Y2D5 859 aa12.28□□□□□ -0.44
PALB2-206ENST00000568219 ARHGAP31Q2M1Z3 1444 aa12.27□□□□□ -0.44
PALB2-206ENST00000568219 A0A0U1RQJ8 604 aa12.27□□□□□ -0.44
PALB2-206ENST00000568219 CCDC196A0A1B0GTZ2 297 aa12.27□□□□□ -0.44
PALB2-206ENST00000568219 E7EVH7 732 aa12.27□□□□□ -0.44
PALB2-206ENST00000568219 TACC1O75410 805 aa12.27□□□□□ -0.44
PALB2-206ENST00000568219 IFT88Q13099 833 aa12.27□□□□□ -0.44
PALB2-206ENST00000568219 RAD9BQ6WBX8 426 aa12.27□□□□□ -0.44
PALB2-206ENST00000568219 TC2NQ8N9U0 490 aa12.27□□□□□ -0.44
PALB2-206ENST00000568219 CWC25Q9NXE8 425 aaPredicted RBP12.27□□□□□ -0.44
PALB2-206ENST00000568219 MAST3O60307 1309 aa12.27□□□□□ -0.45
PALB2-206ENST00000568219 CCDC172P0C7W6 258 aa12.27□□□□□ -0.45
PALB2-206ENST00000568219 FDPSP14324 419 aaKnown RBP12.27□□□□□ -0.45
PALB2-206ENST00000568219 UBA7P41226 1012 aa12.27□□□□□ -0.45
PALB2-206ENST00000568219 C2orf54Q08AI8 447 aa12.27□□□□□ -0.45
PALB2-206ENST00000568219 TBC1D8BQ0IIM8 1120 aa12.27□□□□□ -0.45
PALB2-206ENST00000568219 TAF4BQ92750 862 aa12.27□□□□□ -0.45
PALB2-206ENST00000568219 TRIM10Q9UDY6 481 aa12.27□□□□□ -0.45
PALB2-206ENST00000568219 M0R2C6 588 aa12.27□□□□□ -0.45
PALB2-206ENST00000568219 NCAPHQ15003 741 aa12.27□□□□□ -0.45
PALB2-206ENST00000568219 BEND6Q5SZJ8 279 aaPredicted RBP12.27□□□□□ -0.45
PALB2-206ENST00000568219 MIGA1Q8NAN2 632 aa12.27□□□□□ -0.45
PALB2-206ENST00000568219 ALS2CR12Q96Q35 445 aa12.27□□□□□ -0.45
PALB2-206ENST00000568219 METP08581 1390 aa12.26□□□□□ -0.45
PALB2-206ENST00000568219 TMCO5BA8MYB1 307 aa12.26□□□□□ -0.45
PALB2-206ENST00000568219 EZRP15311 586 aaKnown RBP12.26□□□□□ -0.45
PALB2-206ENST00000568219 NOP2P46087 812 aaKnown RBP12.26□□□□□ -0.45
PALB2-206ENST00000568219 CLNS1AP54105 237 aaKnown RBP12.26□□□□□ -0.45
PALB2-206ENST00000568219 TOM1L2Q6ZVM7 507 aa12.26□□□□□ -0.45
PALB2-206ENST00000568219 B4GALNT4Q76KP1 1039 aa12.26□□□□□ -0.45
PALB2-206ENST00000568219 CPLX4Q7Z7G2 160 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms