RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 MBD5Q9P267 1494 aa7.36□□□□□ -1.23
CAPN3-217ENST00000567817 KDM5AP29375 1690 aaKnown RBP7.36□□□□□ -1.23
CAPN3-217ENST00000567817 TMEM238LA0A1B0GVL6 79 aa7.36□□□□□ -1.23
CAPN3-217ENST00000567817 B3GALT4O96024 378 aa7.36□□□□□ -1.23
CAPN3-217ENST00000567817 ITGAEP38570 1179 aa7.36□□□□□ -1.23
CAPN3-217ENST00000567817 MAPK8P45983 427 aa7.36□□□□□ -1.23
CAPN3-217ENST00000567817 ZNF423Q2M1K9 1284 aa7.36□□□□□ -1.23
CAPN3-217ENST00000567817 ANKRD34AQ69YU3 496 aa7.36□□□□□ -1.23
CAPN3-217ENST00000567817 GLIS3Q8NEA6 775 aa7.36□□□□□ -1.23
CAPN3-217ENST00000567817 DDX54Q8TDD1 881 aaKnown RBP7.36□□□□□ -1.23
CAPN3-217ENST00000567817 NWD1Q149M9 1564 aa7.36□□□□□ -1.23
CAPN3-217ENST00000567817 CCDC141Q6ZP82 1450 aa7.36□□□□□ -1.23
CAPN3-217ENST00000567817 LRP6O75581 1613 aa7.35□□□□□ -1.23
CAPN3-217ENST00000567817 LOC100289279A0A1B0GTE1 492 aa7.35□□□□□ -1.23
CAPN3-217ENST00000567817 MEGF11A6BM72 1044 aa7.35□□□□□ -1.23
CAPN3-217ENST00000567817 ITGB7P26010 798 aa7.35□□□□□ -1.23
CAPN3-217ENST00000567817 GSTM4Q03013 218 aa7.35□□□□□ -1.23
CAPN3-217ENST00000567817 RPS26P11Q5JNZ5 115 aaPredicted RBP7.35□□□□□ -1.23
CAPN3-217ENST00000567817 PRR23CQ6ZRP0 262 aa7.35□□□□□ -1.23
CAPN3-217ENST00000567817 UBL7Q96S82 380 aaPredicted RBP7.35□□□□□ -1.23
CAPN3-217ENST00000567817 USP26Q9BXU7 913 aa7.35□□□□□ -1.23
CAPN3-217ENST00000567817 NRSN2Q9GZP1 204 aa7.35□□□□□ -1.23
CAPN3-217ENST00000567817 ZFYVE1Q9HBF4 777 aa7.35□□□□□ -1.23
CAPN3-217ENST00000567817 AHDC1Q5TGY3 1603 aaPredicted RBP7.34□□□□□ -1.23
CAPN3-217ENST00000567817 XRCC5P13010 732 aaKnown RBP7.34□□□□□ -1.23
CAPN3-217ENST00000567817 ATP2B2Q01814 1243 aa7.34□□□□□ -1.23
CAPN3-217ENST00000567817 ALG1LQ6GMV1 187 aa7.34□□□□□ -1.23
CAPN3-217ENST00000567817 PI16Q6UXB8 463 aa7.34□□□□□ -1.23
CAPN3-217ENST00000567817 FAM46AQ96IP4 442 aaKnown RBP7.34□□□□□ -1.23
CAPN3-217ENST00000567817 BCO2Q9BYV7 579 aa7.34□□□□□ -1.23
CAPN3-217ENST00000567817 PPP4R2Q9NY27 417 aa7.34□□□□□ -1.23
CAPN3-217ENST00000567817 EIF2AK4Q9P2K8 1649 aaKnown RBP7.34□□□□□ -1.24
CAPN3-217ENST00000567817 TMEM2Q9UHN6 1383 aa7.33□□□□□ -1.24
CAPN3-217ENST00000567817 CYP11A1P05108 521 aa7.33□□□□□ -1.24
CAPN3-217ENST00000567817 RBM6P78332 1123 aaKnown RBP7.33□□□□□ -1.24
CAPN3-217ENST00000567817 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.33□□□□□ -1.24
CAPN3-217ENST00000567817 HP1BP3Q5SSJ5 553 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-217ENST00000567817 FDX2Q6P4F2 183 aa7.33□□□□□ -1.24
CAPN3-217ENST00000567817 TMPRSS13Q9BYE2 586 aa7.33□□□□□ -1.24
CAPN3-217ENST00000567817 SRCIN1Q9C0H9 1055 aa7.33□□□□□ -1.24
CAPN3-217ENST00000567817 ARHGAP31Q2M1Z3 1444 aa7.33□□□□□ -1.24
CAPN3-217ENST00000567817 TONSLQ96HA7 1378 aa7.33□□□□□ -1.24
CAPN3-217ENST00000567817 DHX15O43143 795 aaKnown RBP7.32□□□□□ -1.24
CAPN3-217ENST00000567817 LTKP29376 864 aa7.32□□□□□ -1.24
CAPN3-217ENST00000567817 COL19A1Q14993 1142 aa7.32□□□□□ -1.24
CAPN3-217ENST00000567817 PRSS36Q5K4E3 855 aa7.32□□□□□ -1.24
CAPN3-217ENST00000567817 DTHD1Q6ZMT9 781 aa7.32□□□□□ -1.24
CAPN3-217ENST00000567817 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.32□□□□□ -1.24
CAPN3-217ENST00000567817 ARMC10Q8N2F6 343 aa7.32□□□□□ -1.24
CAPN3-217ENST00000567817 UTP4Q969X6 686 aaKnown RBP7.32□□□□□ -1.24
CAPN3-217ENST00000567817 SUGCTQ9HAC7 445 aa7.32□□□□□ -1.24
CAPN3-217ENST00000567817 CYP4F12Q9HCS2 524 aa7.32□□□□□ -1.24
CAPN3-217ENST00000567817 RGS12O14924 1447 aa7.32□□□□□ -1.24
CAPN3-217ENST00000567817 ROCK1Q13464 1354 aa7.32□□□□□ -1.24
CAPN3-217ENST00000567817 SART1O43290 800 aaKnown RBP7.31□□□□□ -1.24
CAPN3-217ENST00000567817 P4HBP07237 508 aaKnown RBP7.31□□□□□ -1.24
CAPN3-217ENST00000567817 FCGRTP55899 365 aa7.31□□□□□ -1.24
CAPN3-217ENST00000567817 NAIPQ13075 1403 aa7.31□□□□□ -1.24
CAPN3-217ENST00000567817 AP3B2Q13367 1082 aa7.31□□□□□ -1.24
CAPN3-217ENST00000567817 POU4F3Q15319 338 aa7.31□□□□□ -1.24
CAPN3-217ENST00000567817 EXOSC6Q5RKV6 272 aaKnown RBP7.31□□□□□ -1.24
CAPN3-217ENST00000567817 NUTM2GQ5VZR2 741 aa7.31□□□□□ -1.24
CAPN3-217ENST00000567817 SMG8Q8ND04 991 aaKnown RBP7.31□□□□□ -1.24
CAPN3-217ENST00000567817 MYRFLQ96LU7 910 aa7.31□□□□□ -1.24
CAPN3-217ENST00000567817 TRIM56Q9BRZ2 755 aaKnown RBP7.31□□□□□ -1.24
CAPN3-217ENST00000567817 HIF3AQ9Y2N7 669 aa7.31□□□□□ -1.24
CAPN3-217ENST00000567817 RAXQ9Y2V3 346 aa7.31□□□□□ -1.24
CAPN3-217ENST00000567817 LRP5O75197 1615 aa7.3□□□□□ -1.24
CAPN3-217ENST00000567817 PTPN23Q9H3S7 1636 aa7.3□□□□□ -1.24
CAPN3-217ENST00000567817 GIPC1O14908 333 aa7.3□□□□□ -1.24
CAPN3-217ENST00000567817 DLGAP3O95886 979 aa7.3□□□□□ -1.24
CAPN3-217ENST00000567817 MAOBP27338 520 aa7.3□□□□□ -1.24
CAPN3-217ENST00000567817 PREPP48147 710 aa7.3□□□□□ -1.24
CAPN3-217ENST00000567817 NXPE4Q6UWF7 544 aa7.3□□□□□ -1.24
CAPN3-217ENST00000567817 CORO1BQ9BR76 489 aa7.3□□□□□ -1.24
CAPN3-217ENST00000567817 TET3O43151 1660 aa7.3□□□□□ -1.24
CAPN3-217ENST00000567817 EFCAB6Q5THR3 1501 aa7.3□□□□□ -1.24
CAPN3-217ENST00000567817 AFF2P51816 1311 aa7.29□□□□□ -1.24
CAPN3-217ENST00000567817 ARHGEF5Q12774 1597 aa7.29□□□□□ -1.24
CAPN3-217ENST00000567817 GAS2O43903 313 aaKnown RBP7.29□□□□□ -1.24
CAPN3-217ENST00000567817 TIAF1O95411 115 aa7.29□□□□□ -1.24
CAPN3-217ENST00000567817 FGD1P98174 961 aa7.29□□□□□ -1.24
CAPN3-217ENST00000567817 FAAP100Q0VG06 881 aa7.29□□□□□ -1.24
CAPN3-217ENST00000567817 SLC51AQ86UW1 340 aa7.29□□□□□ -1.24
CAPN3-217ENST00000567817 SETDB2Q96T68 719 aa7.29□□□□□ -1.24
CAPN3-217ENST00000567817 WWC3Q9ULE0 1092 aa7.29□□□□□ -1.24
CAPN3-217ENST00000567817 SPG7Q9UQ90 795 aa7.29□□□□□ -1.24
CAPN3-217ENST00000567817 DCCP43146 1447 aa7.28□□□□□ -1.24
CAPN3-217ENST00000567817 MROH1Q8NDA8 1641 aa7.28□□□□□ -1.24
CAPN3-217ENST00000567817 ANKRD33BA6NCL7 494 aa7.28□□□□□ -1.24
CAPN3-217ENST00000567817 CCER2I3L3R5 266 aa7.28□□□□□ -1.24
CAPN3-217ENST00000567817 GSC2O15499 205 aa7.28□□□□□ -1.24
CAPN3-217ENST00000567817 TSPY4P0CV99 314 aa7.28□□□□□ -1.24
CAPN3-217ENST00000567817 TSPY10P0CW01 314 aa7.28□□□□□ -1.24
CAPN3-217ENST00000567817 GSTT1P30711 240 aa7.28□□□□□ -1.24
CAPN3-217ENST00000567817 YTHDC1Q96MU7 727 aaKnown RBP7.28□□□□□ -1.24
CAPN3-217ENST00000567817 FRMD6Q96NE9 622 aa7.28□□□□□ -1.24
CAPN3-217ENST00000567817 GPN3Q9UHW5 284 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-217ENST00000567817 DIP2AQ14689 1571 aa7.28□□□□□ -1.24
CAPN3-217ENST00000567817 LDHBP07195 334 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms