RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 INPP5BP32019 993 aa5.86□□□□□ -1.47
CLK3-219ENST00000567805 RGS19P49795 217 aa5.86□□□□□ -1.47
CLK3-219ENST00000567805 RHBDL3P58872 404 aa5.86□□□□□ -1.47
CLK3-219ENST00000567805 MAP3K10Q02779 954 aa5.86□□□□□ -1.47
CLK3-219ENST00000567805 CRHR2Q13324 411 aa5.86□□□□□ -1.47
CLK3-219ENST00000567805 SNAPC2Q13487 334 aa5.86□□□□□ -1.47
CLK3-219ENST00000567805 PICALMQ13492 652 aa5.86□□□□□ -1.47
CLK3-219ENST00000567805 CCL15Q16663 113 aa5.86□□□□□ -1.47
CLK3-219ENST00000567805 NOL9Q5SY16 702 aaKnown RBP5.86□□□□□ -1.47
CLK3-219ENST00000567805 FBXO46Q6PJ61 603 aaPredicted RBP5.86□□□□□ -1.47
CLK3-219ENST00000567805 TBC1D9Q6ZT07 1266 aa5.86□□□□□ -1.47
CLK3-219ENST00000567805 ZSCAN29Q8IWY8 852 aaPredicted RBP5.86□□□□□ -1.47
CLK3-219ENST00000567805 ZFPM1Q8IX07 1006 aa5.86□□□□□ -1.47
CLK3-219ENST00000567805 RPAP2Q8IXW5 612 aaPredicted RBP5.86□□□□□ -1.47
CLK3-219ENST00000567805 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.86□□□□□ -1.47
CLK3-219ENST00000567805 BRI3BPQ8WY22 251 aa5.86□□□□□ -1.47
CLK3-219ENST00000567805 EAF2Q96CJ1 260 aaPredicted RBP5.86□□□□□ -1.47
CLK3-219ENST00000567805 ERO1AQ96HE7 468 aa5.86□□□□□ -1.47
CLK3-219ENST00000567805 NOL10Q9BSC4 688 aaKnown RBP5.86□□□□□ -1.47
CLK3-219ENST00000567805 DDX4Q9NQI0 724 aaKnown RBP5.86□□□□□ -1.47
CLK3-219ENST00000567805 ZBTB40Q9NUA8 1239 aa5.86□□□□□ -1.47
CLK3-219ENST00000567805 DBNLQ9UJU6 430 aaKnown RBP5.86□□□□□ -1.47
CLK3-219ENST00000567805 COG6Q9Y2V7 657 aa5.86□□□□□ -1.47
CLK3-219ENST00000567805 LOC285556D6RIA3 1793 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 DDTLA6NHG4 134 aaPredicted RBP5.85□□□□□ -1.47
CLK3-219ENST00000567805 PHF20L1A8MW92 1017 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 BTBD19C9JJ37 291 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 TBC1D12O60347 775 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 BAG3O95817 575 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 PLCG2P16885 1265 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 ZAP70P43403 619 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 PPP4CP60510 307 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 SP3Q02447 781 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 PDE3AQ14432 1141 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 TAF1CQ15572 869 aaPredicted RBP5.85□□□□□ -1.47
CLK3-219ENST00000567805 NAA16Q6N069 864 aaPredicted RBP5.85□□□□□ -1.47
CLK3-219ENST00000567805 TMED8Q6PL24 325 aaPredicted RBP5.85□□□□□ -1.47
CLK3-219ENST00000567805 SH3BP5LQ7L8J4 393 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 OTOP1Q7RTM1 612 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 SCYL3Q8IZE3 742 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 FAM43AQ8N2R8 423 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 CCDC8Q9H0W5 538 aaPredicted RBP5.85□□□□□ -1.47
CLK3-219ENST00000567805 OSBPL5Q9H0X9 879 aaPredicted RBP5.85□□□□□ -1.47
CLK3-219ENST00000567805 ZFYVE28Q9HCC9 887 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 PICK1Q9NRD5 415 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 SNRKQ9NRH2 765 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 TLR7Q9NYK1 1049 aaKnown RBP5.85□□□□□ -1.47
CLK3-219ENST00000567805 HPS5Q9UPZ3 1129 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 KCNH4Q9UQ05 1017 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 EXOC6BQ9Y2D4 811 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 MYH8P13535 1937 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 NAV1Q8NEY1 1877 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 ZSWIM8A7E2V4 1837 aa5.85□□□□□ -1.47
CLK3-219ENST00000567805 DDX60LQ5H9U9 1706 aaKnown RBP5.85□□□□□ -1.47
CLK3-219ENST00000567805 CXCL11O14625 94 aa5.84□□□□□ -1.47
CLK3-219ENST00000567805 TLR2O60603 784 aa5.84□□□□□ -1.47
CLK3-219ENST00000567805 CTNND1O60716 968 aaKnown RBP5.84□□□□□ -1.47
CLK3-219ENST00000567805 RAB11FIP3O75154 756 aa5.84□□□□□ -1.47
CLK3-219ENST00000567805 PTPRAP18433 802 aa5.84□□□□□ -1.47
CLK3-219ENST00000567805 MLLT1Q03111 559 aaPredicted RBP5.84□□□□□ -1.47
CLK3-219ENST00000567805 ARHGEF6Q15052 776 aa5.84□□□□□ -1.47
CLK3-219ENST00000567805 ANKRD23Q86SG2 305 aa5.84□□□□□ -1.47
CLK3-219ENST00000567805 AACSQ86V21 672 aa5.84□□□□□ -1.47
CLK3-219ENST00000567805 CERS3Q8IU89 383 aa5.84□□□□□ -1.47
CLK3-219ENST00000567805 SIRT2Q8IXJ6 389 aa5.84□□□□□ -1.47
CLK3-219ENST00000567805 TEX11Q8IYF3 940 aa5.84□□□□□ -1.47
CLK3-219ENST00000567805 CLASRPQ8N2M8 674 aaKnown RBP5.84□□□□□ -1.47
CLK3-219ENST00000567805 RHPN1Q8TCX5 695 aa5.84□□□□□ -1.47
CLK3-219ENST00000567805 CD99L2Q8TCZ2 262 aa5.84□□□□□ -1.47
CLK3-219ENST00000567805 SH3RF3Q8TEJ3 882 aaPredicted RBP5.84□□□□□ -1.47
CLK3-219ENST00000567805 MARVELD3Q96A59 401 aa5.84□□□□□ -1.47
CLK3-219ENST00000567805 KIF1BPQ96EK5 621 aa5.84□□□□□ -1.47
CLK3-219ENST00000567805 DHX36Q9H2U1 1008 aaKnown RBP5.84□□□□□ -1.47
CLK3-219ENST00000567805 AATFQ9NY61 560 aaKnown RBP eCLIP5.84□□□□□ -1.47
CLK3-219ENST00000567805 HERC5Q9UII4 1024 aaKnown RBP5.84□□□□□ -1.47
CLK3-219ENST00000567805 TRIM17Q9Y577 477 aa5.84□□□□□ -1.47
CLK3-219ENST00000567805 FLT1P17948 1338 aa5.83□□□□□ -1.48
CLK3-219ENST00000567805 A0A0G2JLL6 359 aaPredicted RBP5.83□□□□□ -1.48
CLK3-219ENST00000567805 IDH1O75874 414 aaKnown RBP5.83□□□□□ -1.48
CLK3-219ENST00000567805 IFIT2P09913 472 aaKnown RBP5.83□□□□□ -1.48
CLK3-219ENST00000567805 MAP3K12Q12852 859 aa5.83□□□□□ -1.48
CLK3-219ENST00000567805 MOGSQ13724 837 aa5.83□□□□□ -1.48
CLK3-219ENST00000567805 TTF1Q15361 905 aaPredicted RBP5.83□□□□□ -1.48
CLK3-219ENST00000567805 C20orf194Q5TEA3 1177 aa5.83□□□□□ -1.48
CLK3-219ENST00000567805 FASTKD5Q7L8L6 764 aaKnown RBP5.83□□□□□ -1.48
CLK3-219ENST00000567805 PRRT2Q7Z6L0 340 aaPredicted RBP5.83□□□□□ -1.48
CLK3-219ENST00000567805 ADGRA1Q86SQ6 560 aa5.83□□□□□ -1.48
CLK3-219ENST00000567805 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.83□□□□□ -1.48
CLK3-219ENST00000567805 TGFBRAP1Q8WUH2 860 aa5.83□□□□□ -1.48
CLK3-219ENST00000567805 BBXQ8WY36 941 aaPredicted RBP5.83□□□□□ -1.48
CLK3-219ENST00000567805 TBC1D2Q9BYX2 928 aa5.83□□□□□ -1.48
CLK3-219ENST00000567805 EFCC1Q9HA90 598 aa5.83□□□□□ -1.48
CLK3-219ENST00000567805 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.83□□□□□ -1.48
CLK3-219ENST00000567805 IL1RAPL2Q9NP60 686 aa5.83□□□□□ -1.48
CLK3-219ENST00000567805 PIH1D3Q9NQM4 214 aaKnown RBP5.83□□□□□ -1.48
CLK3-219ENST00000567805 PI4KBQ9UBF8 816 aa5.83□□□□□ -1.48
CLK3-219ENST00000567805 AFG3L2Q9Y4W6 797 aa5.83□□□□□ -1.48
CLK3-219ENST00000567805 PCDHB13Q9Y5F0 798 aa5.83□□□□□ -1.48
CLK3-219ENST00000567805 ZHX2Q9Y6X8 837 aa5.83□□□□□ -1.48
CLK3-219ENST00000567805 ADGRA2Q96PE1 1338 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms