RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 GIPC1O14908 333 aa6.34□□□□□ -1.39
CDH1-211ENST00000567320 FANCGO15287 622 aa6.34□□□□□ -1.39
CDH1-211ENST00000567320 LMNB1P20700 586 aa6.34□□□□□ -1.39
CDH1-211ENST00000567320 ZBTB37Q5TC79 503 aa6.34□□□□□ -1.39
CDH1-211ENST00000567320 PCNX4Q63HM2 1172 aa6.34□□□□□ -1.39
CDH1-211ENST00000567320 KCT2Q8NC54 265 aa6.34□□□□□ -1.39
CDH1-211ENST00000567320 LRRN4CLQ8ND94 238 aa6.34□□□□□ -1.39
CDH1-211ENST00000567320 ASB11Q8WXH4 323 aa6.34□□□□□ -1.39
CDH1-211ENST00000567320 PRDM7Q9NQW5 492 aa6.34□□□□□ -1.39
CDH1-211ENST00000567320 CELA3AP09093 270 aa6.33□□□□□ -1.4
CDH1-211ENST00000567320 USP17L7P0C7H9 530 aa6.33□□□□□ -1.4
CDH1-211ENST00000567320 ZP2Q05996 745 aa6.33□□□□□ -1.4
CDH1-211ENST00000567320 FMR1Q06787 632 aaKnown RBP eCLIP6.33□□□□□ -1.4
CDH1-211ENST00000567320 PKN1Q16512 942 aa6.33□□□□□ -1.4
CDH1-211ENST00000567320 ARMCX6Q7L4S7 300 aa6.33□□□□□ -1.4
CDH1-211ENST00000567320 UBE3DQ7Z6J8 389 aa6.33□□□□□ -1.4
CDH1-211ENST00000567320 ZNF507Q8TCN5 953 aa6.33□□□□□ -1.4
CDH1-211ENST00000567320 ASB16Q96NS5 453 aa6.33□□□□□ -1.4
CDH1-211ENST00000567320 PRDM5Q9NQX1 630 aaPredicted RBP6.33□□□□□ -1.4
CDH1-211ENST00000567320 TPX2Q9ULW0 747 aaKnown RBP6.33□□□□□ -1.4
CDH1-211ENST00000567320 CYP8B1Q9UNU6 501 aa6.33□□□□□ -1.4
CDH1-211ENST00000567320 TTF2Q9UNY4 1162 aaKnown RBP6.33□□□□□ -1.4
CDH1-211ENST00000567320 SNX11Q9Y5W9 270 aa6.33□□□□□ -1.4
CDH1-211ENST00000567320 FAM155AB1AL88 458 aaPredicted RBP6.32□□□□□ -1.4
CDH1-211ENST00000567320 RASIP1Q5U651 963 aa6.32□□□□□ -1.4
CDH1-211ENST00000567320 SLC23A3Q6PIS1 610 aa6.32□□□□□ -1.4
CDH1-211ENST00000567320 HDXQ7Z353 690 aa6.32□□□□□ -1.4
CDH1-211ENST00000567320 C12orf49Q9H741 205 aa6.32□□□□□ -1.4
CDH1-211ENST00000567320 FAM8A1Q9UBU6 413 aa6.32□□□□□ -1.4
CDH1-211ENST00000567320 CARMIL2Q6F5E8 1435 aa6.32□□□□□ -1.4
CDH1-211ENST00000567320 IGF2BP3O00425 579 aaKnown RBP eCLIP6.31□□□□□ -1.4
CDH1-211ENST00000567320 FARP2O94887 1054 aaPredicted RBP6.31□□□□□ -1.4
CDH1-211ENST00000567320 ETF1P62495 437 aaKnown RBP6.31□□□□□ -1.4
CDH1-211ENST00000567320 INPP5AQ14642 412 aa6.31□□□□□ -1.4
CDH1-211ENST00000567320 ZNF124Q15973 351 aa6.31□□□□□ -1.4
CDH1-211ENST00000567320 LRFN4Q6PJG9 635 aa6.31□□□□□ -1.4
CDH1-211ENST00000567320 KSR1Q8IVT5 923 aa6.31□□□□□ -1.4
CDH1-211ENST00000567320 FOXQ1Q9C009 403 aa6.31□□□□□ -1.4
CDH1-211ENST00000567320 CACNA2D2Q9NY47 1150 aa6.31□□□□□ -1.4
CDH1-211ENST00000567320 LRIG2O94898 1065 aa6.3□□□□□ -1.4
CDH1-211ENST00000567320 LDHBP07195 334 aaKnown RBP6.3□□□□□ -1.4
CDH1-211ENST00000567320 NTF4P34130 210 aa6.3□□□□□ -1.4
CDH1-211ENST00000567320 CDKAL1Q5VV42 579 aa6.3□□□□□ -1.4
CDH1-211ENST00000567320 SPACA3Q8IXA5 215 aa6.3□□□□□ -1.4
CDH1-211ENST00000567320 PLPPR2Q96GM1 343 aa6.3□□□□□ -1.4
CDH1-211ENST00000567320 SLC38A3Q99624 504 aa6.3□□□□□ -1.4
CDH1-211ENST00000567320 MIPEPQ99797 713 aa6.3□□□□□ -1.4
CDH1-211ENST00000567320 TNKS2Q9H2K2 1166 aa6.3□□□□□ -1.4
CDH1-211ENST00000567320 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.3□□□□□ -1.4
CDH1-211ENST00000567320 P4HBP07237 508 aaKnown RBP6.29□□□□□ -1.4
CDH1-211ENST00000567320 RING1Q06587 406 aa6.29□□□□□ -1.4
CDH1-211ENST00000567320 KCNA1Q09470 495 aa6.29□□□□□ -1.4
CDH1-211ENST00000567320 KCNMB1Q16558 191 aa6.29□□□□□ -1.4
CDH1-211ENST00000567320 NKPD1Q17RQ9 610 aa6.29□□□□□ -1.4
CDH1-211ENST00000567320 SCARA3Q6AZY7 606 aa6.29□□□□□ -1.4
CDH1-211ENST00000567320 TTBK2Q6IQ55 1244 aa6.29□□□□□ -1.4
CDH1-211ENST00000567320 FAM214BQ7L5A3 538 aa6.29□□□□□ -1.4
CDH1-211ENST00000567320 TMEM40Q8WWA1 233 aa6.29□□□□□ -1.4
CDH1-211ENST00000567320 TIMELESSQ9UNS1 1208 aa6.29□□□□□ -1.4
CDH1-211ENST00000567320 LRRC10BA6NIK2 292 aa6.28□□□□□ -1.4
CDH1-211ENST00000567320 EOMESO95936 686 aa6.28□□□□□ -1.4
CDH1-211ENST00000567320 EIF4BP23588 611 aaKnown RBP6.28□□□□□ -1.4
CDH1-211ENST00000567320 CLCN7P51798 805 aa6.28□□□□□ -1.4
CDH1-211ENST00000567320 JAG1P78504 1218 aa6.28□□□□□ -1.4
CDH1-211ENST00000567320 PTPN11Q06124 597 aaPredicted RBP6.28□□□□□ -1.4
CDH1-211ENST00000567320 CCDC85BQ15834 202 aaPredicted RBP6.28□□□□□ -1.4
CDH1-211ENST00000567320 WIPI1Q5MNZ9 446 aaPredicted RBP6.28□□□□□ -1.4
CDH1-211ENST00000567320 SFRP5Q5T4F7 317 aa6.28□□□□□ -1.4
CDH1-211ENST00000567320 SV2BQ7L1I2 683 aa6.28□□□□□ -1.4
CDH1-211ENST00000567320 ZSWIM9Q86XI8 627 aa6.28□□□□□ -1.4
CDH1-211ENST00000567320 XAGE3Q8WTP9 111 aa6.28□□□□□ -1.4
CDH1-211ENST00000567320 FBRSQ9HAH7 460 aa6.28□□□□□ -1.4
CDH1-211ENST00000567320 MAPK8IP1Q9UQF2 711 aa6.28□□□□□ -1.4
CDH1-211ENST00000567320 SLITRK5O94991 958 aa6.27□□□□□ -1.41
CDH1-211ENST00000567320 CBX7O95931 251 aa6.27□□□□□ -1.41
CDH1-211ENST00000567320 FGD1P98174 961 aa6.27□□□□□ -1.41
CDH1-211ENST00000567320 MAP3K11Q16584 847 aa6.27□□□□□ -1.41
CDH1-211ENST00000567320 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.27□□□□□ -1.41
CDH1-211ENST00000567320 MFSD4AQ8N468 514 aa6.27□□□□□ -1.41
CDH1-211ENST00000567320 HSPA12BQ96MM6 686 aa6.27□□□□□ -1.41
CDH1-211ENST00000567320 CARS2Q9HA77 564 aaKnown RBP6.27□□□□□ -1.41
CDH1-211ENST00000567320 PITPNM2Q9BZ72 1349 aa6.26□□□□□ -1.41
CDH1-211ENST00000567320 H3BS24 57 aa6.26□□□□□ -1.41
CDH1-211ENST00000567320 MLANAQ16655 118 aa6.26□□□□□ -1.41
CDH1-211ENST00000567320 CYFIP1Q7L576 1253 aa6.26□□□□□ -1.41
CDH1-211ENST00000567320 HID1Q8IV36 788 aa6.26□□□□□ -1.41
CDH1-211ENST00000567320 MFSD2AQ8NA29 543 aa6.26□□□□□ -1.41
CDH1-211ENST00000567320 FLAD1Q8NFF5 587 aa6.26□□□□□ -1.41
CDH1-211ENST00000567320 FRMD6Q96NE9 622 aa6.26□□□□□ -1.41
CDH1-211ENST00000567320 WNT10AQ9GZT5 417 aa6.26□□□□□ -1.41
CDH1-211ENST00000567320 ATP13A1Q9HD20 1204 aa6.26□□□□□ -1.41
CDH1-211ENST00000567320 SNCAIPQ9Y6H5 919 aa6.26□□□□□ -1.41
CDH1-211ENST00000567320 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
CDH1-211ENST00000567320 PRR33A8MZF0 331 aa6.25□□□□□ -1.41
CDH1-211ENST00000567320 GRK4P32298 578 aa6.25□□□□□ -1.41
CDH1-211ENST00000567320 AFMP43652 599 aa6.25□□□□□ -1.41
CDH1-211ENST00000567320 CDK8P49336 464 aa6.25□□□□□ -1.41
CDH1-211ENST00000567320 SEPT6Q14141 434 aa6.25□□□□□ -1.41
CDH1-211ENST00000567320 SLBPQ14493 270 aaKnown RBP eCLIP6.25□□□□□ -1.41
CDH1-211ENST00000567320 NKG7Q16617 165 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms