RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 MKRN1Q9UHC7 482 aaKnown RBP13.74□□□□□ -0.21
BBS4-213ENST00000567279 SAP30BPQ9UHR5 308 aaKnown RBP13.74□□□□□ -0.21
BBS4-213ENST00000567279 SLC12A7Q9Y666 1083 aa13.74□□□□□ -0.21
BBS4-213ENST00000567279 DDX49Q9Y6V7 483 aaKnown RBP13.74□□□□□ -0.21
BBS4-213ENST00000567279 TNKSO95271 1327 aa13.73□□□□□ -0.21
BBS4-213ENST00000567279 ORC4O43929 436 aa13.73□□□□□ -0.21
BBS4-213ENST00000567279 FGRP09769 529 aa13.73□□□□□ -0.21
BBS4-213ENST00000567279 NCLP19338 710 aaKnown RBP13.73□□□□□ -0.21
BBS4-213ENST00000567279 PDE4BQ07343 736 aa13.73□□□□□ -0.21
BBS4-213ENST00000567279 GSE1Q14687 1217 aa13.73□□□□□ -0.21
BBS4-213ENST00000567279 CCDC93Q567U6 631 aa13.73□□□□□ -0.21
BBS4-213ENST00000567279 C12orf60Q5U649 245 aa13.73□□□□□ -0.21
BBS4-213ENST00000567279 GDPD2Q9HCC8 539 aa13.73□□□□□ -0.21
BBS4-213ENST00000567279 KCNQ5Q9NR82 932 aa13.73□□□□□ -0.21
BBS4-213ENST00000567279 CNPY2Q9Y2B0 182 aa13.73□□□□□ -0.21
BBS4-213ENST00000567279 ATF5Q9Y2D1 282 aaPredicted RBP13.73□□□□□ -0.21
BBS4-213ENST00000567279 MYH15Q9Y2K3 1946 aa13.73□□□□□ -0.21
BBS4-213ENST00000567279 ROBO3Q96MS0 1386 aa13.73□□□□□ -0.21
BBS4-213ENST00000567279 POLR3DP05423 398 aaPredicted RBP13.72□□□□□ -0.21
BBS4-213ENST00000567279 SCNN1DP51172 638 aa13.72□□□□□ -0.21
BBS4-213ENST00000567279 RHBDL3P58872 404 aa13.72□□□□□ -0.21
BBS4-213ENST00000567279 KIAA2012Q0VF49 1180 aa13.72□□□□□ -0.21
BBS4-213ENST00000567279 ZSCAN10Q96SZ4 725 aaPredicted RBP13.72□□□□□ -0.21
BBS4-213ENST00000567279 FLT1P17948 1338 aa13.72□□□□□ -0.21
BBS4-213ENST00000567279 PPIP5K2O43314 1243 aa13.72□□□□□ -0.21
BBS4-213ENST00000567279 POLD1P28340 1107 aa13.72□□□□□ -0.21
BBS4-213ENST00000567279 ADD1P35611 737 aaKnown RBP13.72□□□□□ -0.21
BBS4-213ENST00000567279 CPLX2Q6PUV4 134 aaKnown RBP13.72□□□□□ -0.21
BBS4-213ENST00000567279 IQCA1Q86XH1 822 aa13.72□□□□□ -0.21
BBS4-213ENST00000567279 DYNLL2Q96FJ2 89 aa13.72□□□□□ -0.21
BBS4-213ENST00000567279 ORC3Q9UBD5 711 aaPredicted RBP13.72□□□□□ -0.21
BBS4-213ENST00000567279 NID2Q14112 1375 aa13.71□□□□□ -0.21
BBS4-213ENST00000567279 PSME4Q14997 1843 aa13.71□□□□□ -0.21
BBS4-213ENST00000567279 CDKL5O76039 1030 aa13.71□□□□□ -0.21
BBS4-213ENST00000567279 FDPSP14324 419 aaKnown RBP13.71□□□□□ -0.21
BBS4-213ENST00000567279 CDC27P30260 824 aa13.71□□□□□ -0.21
BBS4-213ENST00000567279 DNM1Q05193 864 aaKnown RBP13.71□□□□□ -0.21
BBS4-213ENST00000567279 SEC23AQ15436 765 aa13.71□□□□□ -0.21
BBS4-213ENST00000567279 KLHL40Q2TBA0 621 aa13.71□□□□□ -0.21
BBS4-213ENST00000567279 FAM47AQ5JRC9 791 aa13.71□□□□□ -0.21
BBS4-213ENST00000567279 ZNF654Q8IZM8 581 aa13.71□□□□□ -0.21
BBS4-213ENST00000567279 TMTC2Q8N394 836 aa13.71□□□□□ -0.21
BBS4-213ENST00000567279 ENAHQ8N8S7 591 aaPredicted RBP13.71□□□□□ -0.21
BBS4-213ENST00000567279 MTFR1LQ9H019 292 aa13.71□□□□□ -0.21
BBS4-213ENST00000567279 FIBPO43427 364 aa13.7□□□□□ -0.22
BBS4-213ENST00000567279 KCNA3P22001 575 aa13.7□□□□□ -0.22
BBS4-213ENST00000567279 GUCY1B3Q02153 619 aa13.7□□□□□ -0.22
BBS4-213ENST00000567279 RESTQ13127 1097 aa13.7□□□□□ -0.22
BBS4-213ENST00000567279 R3HDM1Q15032 1099 aaKnown RBP13.7□□□□□ -0.22
BBS4-213ENST00000567279 DACT2Q5SW24 774 aa13.7□□□□□ -0.22
BBS4-213ENST00000567279 IFIT1BQ5T764 474 aaKnown RBP13.7□□□□□ -0.22
BBS4-213ENST00000567279 STRIP1Q5VSL9 837 aa13.7□□□□□ -0.22
BBS4-213ENST00000567279 TEKT1Q969V4 418 aa13.7□□□□□ -0.22
BBS4-213ENST00000567279 USP17L3A6NCW0 530 aa13.7□□□□□ -0.22
BBS4-213ENST00000567279 USP17L4A6NCW7 530 aa13.7□□□□□ -0.22
BBS4-213ENST00000567279 TSPY2A6NKD2 308 aa13.7□□□□□ -0.22
BBS4-213ENST00000567279 DEKP35659 375 aaKnown RBP13.7□□□□□ -0.22
BBS4-213ENST00000567279 FKBP1AP62942 108 aaKnown RBP13.7□□□□□ -0.22
BBS4-213ENST00000567279 PICALMQ13492 652 aa13.7□□□□□ -0.22
BBS4-213ENST00000567279 RTN1Q16799 776 aa13.7□□□□□ -0.22
BBS4-213ENST00000567279 GRIPAP1Q4V328 841 aa13.7□□□□□ -0.22
BBS4-213ENST00000567279 FAM173BQ6P4H8 233 aa13.7□□□□□ -0.22
BBS4-213ENST00000567279 USP17L1Q7RTZ2 530 aa13.7□□□□□ -0.22
BBS4-213ENST00000567279 USP48Q86UV5 1035 aa13.7□□□□□ -0.22
BBS4-213ENST00000567279 KIAA0825Q8IV33 1275 aa13.7□□□□□ -0.22
BBS4-213ENST00000567279 NUP133Q8WUM0 1156 aa13.7□□□□□ -0.22
BBS4-213ENST00000567279 CRKP46108 304 aa13.69□□□□□ -0.22
BBS4-213ENST00000567279 PLCD1P51178 756 aa13.69□□□□□ -0.22
BBS4-213ENST00000567279 RTKN2Q8IZC4 609 aa13.69□□□□□ -0.22
BBS4-213ENST00000567279 TMEM87AQ8NBN3 555 aa13.69□□□□□ -0.22
BBS4-213ENST00000567279 PHKBQ93100 1093 aa13.69□□□□□ -0.22
BBS4-213ENST00000567279 C8orf76Q96K31 380 aa13.69□□□□□ -0.22
BBS4-213ENST00000567279 MKNK2Q9HBH9 465 aa13.69□□□□□ -0.22
BBS4-213ENST00000567279 FAM217BQ9NTX9 383 aaPredicted RBP13.69□□□□□ -0.22
BBS4-213ENST00000567279 BRCA1P38398 1863 aaKnown RBP13.69□□□□□ -0.22
BBS4-213ENST00000567279 MYH8P13535 1937 aa13.68□□□□□ -0.22
BBS4-213ENST00000567279 RCAN1P53805 252 aa13.68□□□□□ -0.22
BBS4-213ENST00000567279 KRT85P78386 507 aa13.68□□□□□ -0.22
BBS4-213ENST00000567279 HHIPL2Q6UWX4 724 aa13.68□□□□□ -0.22
BBS4-213ENST00000567279 SLC44A5Q8NCS7 719 aa13.68□□□□□ -0.22
BBS4-213ENST00000567279 GPT2Q8TD30 523 aa13.68□□□□□ -0.22
BBS4-213ENST00000567279 USP40Q9NVE5 1235 aa13.68□□□□□ -0.22
BBS4-213ENST00000567279 MYH6P13533 1939 aa13.68□□□□□ -0.22
BBS4-213ENST00000567279 NMT2O60551 498 aa13.67□□□□□ -0.22
BBS4-213ENST00000567279 GADD45BO75293 160 aaPredicted RBP13.67□□□□□ -0.22
BBS4-213ENST00000567279 MBD3O95983 291 aa13.67□□□□□ -0.22
BBS4-213ENST00000567279 IARSP41252 1262 aaKnown RBP13.67□□□□□ -0.22
BBS4-213ENST00000567279 TGFB2P61812 414 aa13.67□□□□□ -0.22
BBS4-213ENST00000567279 NTRK3Q16288 839 aa13.67□□□□□ -0.22
BBS4-213ENST00000567279 CSPP1Q1MSJ5 1256 aa13.67□□□□□ -0.22
BBS4-213ENST00000567279 CATIPQ7Z7H3 387 aa13.67□□□□□ -0.22
BBS4-213ENST00000567279 KLHL34Q8N239 644 aa13.67□□□□□ -0.22
BBS4-213ENST00000567279 PSMD1Q99460 953 aa13.67□□□□□ -0.22
BBS4-213ENST00000567279 ZSCAN16Q9H4T2 348 aaPredicted RBP13.67□□□□□ -0.22
BBS4-213ENST00000567279 PPP1R1BQ9UD71 204 aaPredicted RBP13.67□□□□□ -0.22
BBS4-213ENST00000567279 TAOK2Q9UL54 1235 aa13.67□□□□□ -0.22
BBS4-213ENST00000567279 STK36Q9NRP7 1315 aa13.67□□□□□ -0.22
BBS4-213ENST00000567279 YDJCA8MPS7 323 aa13.67□□□□□ -0.22
BBS4-213ENST00000567279 TFAP4Q01664 338 aa13.67□□□□□ -0.22
BBS4-213ENST00000567279 SSRP1Q08945 709 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms