RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 HABP4Q5JVS0 413 aaKnown RBP20.05■□□□□ 0.8
CLN6-208ENST00000567060 GIMAP6Q6P9H5 292 aa20.05■□□□□ 0.8
CLN6-208ENST00000567060 SH3RF3Q8TEJ3 882 aaPredicted RBP20.05■□□□□ 0.8
CLN6-208ENST00000567060 RUFY2Q8WXA3 655 aa20.05■□□□□ 0.8
CLN6-208ENST00000567060 OSBP2Q969R2 916 aa20.05■□□□□ 0.8
CLN6-208ENST00000567060 DDRGK1Q96HY6 314 aa20.05■□□□□ 0.8
CLN6-208ENST00000567060 PUS7LQ9H0K6 701 aaKnown RBP20.05■□□□□ 0.8
CLN6-208ENST00000567060 DHX36Q9H2U1 1008 aaKnown RBP20.05■□□□□ 0.8
CLN6-208ENST00000567060 ATP8A2Q9NTI2 1148 aa20.05■□□□□ 0.8
CLN6-208ENST00000567060 GTF3C3Q9Y5Q9 886 aa20.05■□□□□ 0.8
CLN6-208ENST00000567060 ATRNL1Q5VV63 1379 aa20.05■□□□□ 0.8
CLN6-208ENST00000567060 SSC5DA1L4H1 1573 aa20.04■□□□□ 0.8
CLN6-208ENST00000567060 TCP10L2B9ZVM9 353 aa20.04■□□□□ 0.8
CLN6-208ENST00000567060 MBD4O95243 580 aa20.04■□□□□ 0.8
CLN6-208ENST00000567060 CAP1Q01518 475 aa20.04■□□□□ 0.8
CLN6-208ENST00000567060 MCMDC2Q4G0Z9 681 aa20.04■□□□□ 0.8
CLN6-208ENST00000567060 WNK4Q96J92 1243 aa20.04■□□□□ 0.8
CLN6-208ENST00000567060 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.04■□□□□ 0.8
CLN6-208ENST00000567060 FAM198AQ9UFP1 575 aa20.04■□□□□ 0.8
CLN6-208ENST00000567060 KIAA0100Q14667 2235 aaKnown RBP20.03■□□□□ 0.8
CLN6-208ENST00000567060 CDK5RAP2Q96SN8 1893 aa20.03■□□□□ 0.8
CLN6-208ENST00000567060 GPAA1O43292 621 aa20.03■□□□□ 0.8
CLN6-208ENST00000567060 ZBTB48P10074 688 aaPredicted RBP20.03■□□□□ 0.8
CLN6-208ENST00000567060 USP5P45974 858 aa20.03■□□□□ 0.8
CLN6-208ENST00000567060 DYNLL1P63167 89 aaKnown RBP20.03■□□□□ 0.8
CLN6-208ENST00000567060 NFIAQ12857 509 aa20.03■□□□□ 0.8
CLN6-208ENST00000567060 STRBPQ96SI9 672 aaKnown RBP20.03■□□□□ 0.8
CLN6-208ENST00000567060 OSBPL5Q9H0X9 879 aaPredicted RBP20.03■□□□□ 0.8
CLN6-208ENST00000567060 GJA5P36382 358 aa20.02■□□□□ 0.8
CLN6-208ENST00000567060 CASC1Q6TDU7 716 aa20.02■□□□□ 0.8
CLN6-208ENST00000567060 LCORLQ8N3X6 602 aa20.02■□□□□ 0.8
CLN6-208ENST00000567060 TGFBRAP1Q8WUH2 860 aa20.02■□□□□ 0.8
CLN6-208ENST00000567060 PTPN18Q99952 460 aa20.02■□□□□ 0.8
CLN6-208ENST00000567060 PTPN22Q9Y2R2 807 aa20.02■□□□□ 0.8
CLN6-208ENST00000567060 FLT1P17948 1338 aa20.02■□□□□ 0.79
CLN6-208ENST00000567060 UNCXA6NJT0 531 aa20.01■□□□□ 0.79
CLN6-208ENST00000567060 CACNB3P54284 484 aa20.01■□□□□ 0.79
CLN6-208ENST00000567060 NBPF12Q5TAG4 269 aaPredicted RBP20.01■□□□□ 0.79
CLN6-208ENST00000567060 TEPSINQ96N21 525 aa20.01■□□□□ 0.79
CLN6-208ENST00000567060 ARMT1Q9H993 441 aa20.01■□□□□ 0.79
CLN6-208ENST00000567060 PPP1R12BO60237 982 aaPredicted RBP20■□□□□ 0.79
CLN6-208ENST00000567060 USP2O75604 605 aaPredicted RBP20■□□□□ 0.79
CLN6-208ENST00000567060 EN2P19622 333 aaPredicted RBP20■□□□□ 0.79
CLN6-208ENST00000567060 CHMLP26374 656 aa20■□□□□ 0.79
CLN6-208ENST00000567060 NMIQ13287 307 aaPredicted RBP20■□□□□ 0.79
CLN6-208ENST00000567060 CRHR2Q13324 411 aa20■□□□□ 0.79
CLN6-208ENST00000567060 PICALMQ13492 652 aa20■□□□□ 0.79
CLN6-208ENST00000567060 DCAF15Q66K64 600 aa20■□□□□ 0.79
CLN6-208ENST00000567060 AMOTL1Q8IY63 956 aa20■□□□□ 0.79
CLN6-208ENST00000567060 CD99L2Q8TCZ2 262 aa20■□□□□ 0.79
CLN6-208ENST00000567060 NACAP1Q9BZK3 213 aa20■□□□□ 0.79
CLN6-208ENST00000567060 DDX4Q9NQI0 724 aaKnown RBP20■□□□□ 0.79
CLN6-208ENST00000567060 SLC4A4Q9Y6R1 1079 aa20■□□□□ 0.79
CLN6-208ENST00000567060 CCDC171Q6TFL3 1326 aa20■□□□□ 0.79
CLN6-208ENST00000567060 PATL2C9JE40 543 aaKnown RBP19.99■□□□□ 0.79
CLN6-208ENST00000567060 M0R2C6 588 aa19.99■□□□□ 0.79
CLN6-208ENST00000567060 HLA-DOAP06340 250 aa19.99■□□□□ 0.79
CLN6-208ENST00000567060 TCP10Q12799 353 aa19.99■□□□□ 0.79
CLN6-208ENST00000567060 SLFNL1Q499Z3 407 aa19.99■□□□□ 0.79
CLN6-208ENST00000567060 TTC6Q86TZ1 520 aa19.99■□□□□ 0.79
CLN6-208ENST00000567060 ARMC5Q96C12 935 aa19.99■□□□□ 0.79
CLN6-208ENST00000567060 FAM227BQ96M60 508 aa19.99■□□□□ 0.79
CLN6-208ENST00000567060 TMEM39BQ9GZU3 492 aa19.99■□□□□ 0.79
CLN6-208ENST00000567060 DCP1AQ9NPI6 582 aaPredicted RBP19.99■□□□□ 0.79
CLN6-208ENST00000567060 PI4KBQ9UBF8 816 aa19.99■□□□□ 0.79
CLN6-208ENST00000567060 MYH1P12882 1939 aa19.98■□□□□ 0.79
CLN6-208ENST00000567060 A0A0D9SFI3 127 aa19.98■□□□□ 0.79
CLN6-208ENST00000567060 TESPA1A2RU30 521 aaPredicted RBP19.98■□□□□ 0.79
CLN6-208ENST00000567060 TBC1D12O60347 775 aa19.98■□□□□ 0.79
CLN6-208ENST00000567060 CDC45O75419 566 aa19.98■□□□□ 0.79
CLN6-208ENST00000567060 CHGBP05060 677 aa19.98■□□□□ 0.79
CLN6-208ENST00000567060 MAP3K10Q02779 954 aa19.98■□□□□ 0.79
CLN6-208ENST00000567060 CWC27Q6UX04 472 aaKnown RBP19.98■□□□□ 0.79
CLN6-208ENST00000567060 FOXP4Q8IVH2 680 aaPredicted RBP19.98■□□□□ 0.79
CLN6-208ENST00000567060 MAPKAPK5Q8IW41 473 aa19.98■□□□□ 0.79
CLN6-208ENST00000567060 ZSCAN29Q8IWY8 852 aaPredicted RBP19.98■□□□□ 0.79
CLN6-208ENST00000567060 ERO1AQ96HE7 468 aa19.98■□□□□ 0.79
CLN6-208ENST00000567060 ARPP21Q9UBL0 812 aaPredicted RBP19.98■□□□□ 0.79
CLN6-208ENST00000567060 HERC5Q9UII4 1024 aaKnown RBP19.98■□□□□ 0.79
CLN6-208ENST00000567060 NAV1Q8NEY1 1877 aa19.98■□□□□ 0.79
CLN6-208ENST00000567060 ZMYM6O95789 1325 aa19.98■□□□□ 0.79
CLN6-208ENST00000567060 SZT2Q5T011 3432 aa19.98■□□□□ 0.79
CLN6-208ENST00000567060 DDX60LQ5H9U9 1706 aaKnown RBP19.97■□□□□ 0.79
CLN6-208ENST00000567060 SKAP1Q86WV1 359 aa19.97■□□□□ 0.79
CLN6-208ENST00000567060 SEC62Q99442 399 aaKnown RBP19.97■□□□□ 0.79
CLN6-208ENST00000567060 EHD4Q9H223 541 aa19.97■□□□□ 0.79
CLN6-208ENST00000567060 LAMB1P07942 1786 aa19.97■□□□□ 0.79
CLN6-208ENST00000567060 GSG1L2A8MUP6 293 aa19.96■□□□□ 0.79
CLN6-208ENST00000567060 EIF5BO60841 1220 aaKnown RBP19.96■□□□□ 0.79
CLN6-208ENST00000567060 ALX1Q15699 326 aa19.96■□□□□ 0.79
CLN6-208ENST00000567060 SBK1Q52WX2 424 aa19.96■□□□□ 0.79
CLN6-208ENST00000567060 METTL16Q86W50 562 aaKnown RBP19.96■□□□□ 0.79
CLN6-208ENST00000567060 SDR42E1Q8WUS8 393 aa19.96■□□□□ 0.79
CLN6-208ENST00000567060 EFCC1Q9HA90 598 aa19.96■□□□□ 0.79
CLN6-208ENST00000567060 SP3Q02447 781 aa19.95■□□□□ 0.78
CLN6-208ENST00000567060 MS4A4AQ96JQ5 239 aa19.95■□□□□ 0.78
CLN6-208ENST00000567060 DSCC1Q9BVC3 393 aa19.95■□□□□ 0.78
CLN6-208ENST00000567060 MCM9Q9NXL9 1143 aa19.95■□□□□ 0.78
CLN6-208ENST00000567060 DDTLA6NHG4 134 aaPredicted RBP19.94■□□□□ 0.78
CLN6-208ENST00000567060 SGSM2O43147 1006 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms