RNA–Protein interactions for RNA: ENST00000567019.1

EPB42-206, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best)

Gene EPB42, Length 1,628 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-206ENST00000567019 FBXL16Q8N461 479 aa18.16■□□□□ 0.5
EPB42-206ENST00000567019 DHX36Q9H2U1 1008 aaKnown RBP18.16■□□□□ 0.5
EPB42-206ENST00000567019 MKNK2Q9HBH9 465 aa18.16■□□□□ 0.5
EPB42-206ENST00000567019 TOB2Q14106 344 aaPredicted RBP18.16■□□□□ 0.5
EPB42-206ENST00000567019 SART3Q15020 963 aaKnown RBP18.16■□□□□ 0.5
EPB42-206ENST00000567019 TMEM87BQ96K49 555 aa18.16■□□□□ 0.5
EPB42-206ENST00000567019 LRRC2Q9BYS8 371 aa18.16■□□□□ 0.5
EPB42-206ENST00000567019 SH2B1Q9NRF2 756 aaPredicted RBP18.16■□□□□ 0.5
EPB42-206ENST00000567019 ZSWIM5Q9P217 1185 aa18.16■□□□□ 0.5
EPB42-206ENST00000567019 ZNF70Q9UC06 446 aaPredicted RBP18.16■□□□□ 0.5
EPB42-206ENST00000567019 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.16■□□□□ 0.5
EPB42-206ENST00000567019 TACC3Q9Y6A5 838 aa18.16■□□□□ 0.5
EPB42-206ENST00000567019 SMIM22K7EJ46 135 aa18.15■□□□□ 0.5
EPB42-206ENST00000567019 RANBP6O60518 1105 aaKnown RBP18.15■□□□□ 0.5
EPB42-206ENST00000567019 ENTPD3O75355 529 aa18.15■□□□□ 0.5
EPB42-206ENST00000567019 ANTXR2P58335 489 aa18.15■□□□□ 0.5
EPB42-206ENST00000567019 TCP10Q12799 353 aa18.15■□□□□ 0.5
EPB42-206ENST00000567019 SPDYE2Q495Y8 402 aa18.15■□□□□ 0.5
EPB42-206ENST00000567019 FKBP1CQ5VVH2 108 aa18.15■□□□□ 0.5
EPB42-206ENST00000567019 CYB5R4Q7L1T6 521 aa18.15■□□□□ 0.5
EPB42-206ENST00000567019 BRF1Q92994 677 aa18.15■□□□□ 0.5
EPB42-206ENST00000567019 MTA3Q9BTC8 594 aa18.15■□□□□ 0.5
EPB42-206ENST00000567019 AGXT2Q9BYV1 514 aa18.15■□□□□ 0.5
EPB42-206ENST00000567019 CLRN2A0PK11 232 aa18.14■□□□□ 0.49
EPB42-206ENST00000567019 ERICH2A1L162 156 aa18.14■□□□□ 0.49
EPB42-206ENST00000567019 WNT10BO00744 389 aa18.14■□□□□ 0.49
EPB42-206ENST00000567019 PRDM1O75626 825 aa18.14■□□□□ 0.49
EPB42-206ENST00000567019 EVX2Q03828 476 aa18.14■□□□□ 0.49
EPB42-206ENST00000567019 RBM26Q5T8P6 1007 aaKnown RBP18.14■□□□□ 0.49
EPB42-206ENST00000567019 ZSCAN29Q8IWY8 852 aaPredicted RBP18.14■□□□□ 0.49
EPB42-206ENST00000567019 SPRYD3Q8NCJ5 442 aa18.14■□□□□ 0.49
EPB42-206ENST00000567019 DYNLL2Q96FJ2 89 aa18.14■□□□□ 0.49
EPB42-206ENST00000567019 ZBED3Q96IU2 234 aaPredicted RBP18.14■□□□□ 0.49
EPB42-206ENST00000567019 LARP6Q9BRS8 491 aaKnown RBP18.14■□□□□ 0.49
EPB42-206ENST00000567019 UBAC1Q9BSL1 405 aa18.14■□□□□ 0.49
EPB42-206ENST00000567019 FAM198AQ9UFP1 575 aa18.14■□□□□ 0.49
EPB42-206ENST00000567019 C16orf86Q6ZW13 317 aa18.13■□□□□ 0.49
EPB42-206ENST00000567019 IQCA1Q86XH1 822 aa18.13■□□□□ 0.49
EPB42-206ENST00000567019 ZNF444Q8N0Y2 327 aaPredicted RBP18.13■□□□□ 0.49
EPB42-206ENST00000567019 VEZTQ9HBM0 779 aa18.13■□□□□ 0.49
EPB42-206ENST00000567019 ANGEL1Q9UNK9 670 aaKnown RBP18.13■□□□□ 0.49
EPB42-206ENST00000567019 SHTN1A0MZ66 631 aa18.12■□□□□ 0.49
EPB42-206ENST00000567019 TCP10L2B9ZVM9 353 aa18.12■□□□□ 0.49
EPB42-206ENST00000567019 IFIT3O14879 490 aaKnown RBP18.12■□□□□ 0.49
EPB42-206ENST00000567019 NBPF9Q3BBW0 867 aa18.12■□□□□ 0.49
EPB42-206ENST00000567019 TMEM67Q5HYA8 995 aa18.12■□□□□ 0.49
EPB42-206ENST00000567019 DPY19L2Q6NUT2 758 aa18.12■□□□□ 0.49
EPB42-206ENST00000567019 GPRC5DQ9NZD1 345 aa18.12■□□□□ 0.49
EPB42-206ENST00000567019 PI4KBQ9UBF8 816 aa18.12■□□□□ 0.49
EPB42-206ENST00000567019 SWAP70Q9UH65 585 aa18.12■□□□□ 0.49
EPB42-206ENST00000567019 SERPINB13Q9UIV8 391 aa18.12■□□□□ 0.49
EPB42-206ENST00000567019 TAOK2Q9UL54 1235 aa18.12■□□□□ 0.49
EPB42-206ENST00000567019 TPCN1Q9ULQ1 816 aa18.12■□□□□ 0.49
EPB42-206ENST00000567019 TSPY2A6NKD2 308 aa18.12■□□□□ 0.49
EPB42-206ENST00000567019 LMOD1P29536 600 aaPredicted RBP18.12■□□□□ 0.49
EPB42-206ENST00000567019 CDK8P49336 464 aa18.12■□□□□ 0.49
EPB42-206ENST00000567019 SAMD7Q7Z3H4 446 aa18.12■□□□□ 0.49
EPB42-206ENST00000567019 ZFPM1Q8IX07 1006 aa18.12■□□□□ 0.49
EPB42-206ENST00000567019 TMTC2Q8N394 836 aa18.12■□□□□ 0.49
EPB42-206ENST00000567019 FAM151AQ8WW52 585 aa18.12■□□□□ 0.49
EPB42-206ENST00000567019 TRIM34Q9BYJ4 488 aa18.12■□□□□ 0.49
EPB42-206ENST00000567019 EHD4Q9H223 541 aa18.12■□□□□ 0.49
EPB42-206ENST00000567019 COL2A1P02458 1487 aaPredicted RBP18.12■□□□□ 0.49
EPB42-206ENST00000567019 ZC3H4Q9UPT8 1303 aaKnown RBP18.11■□□□□ 0.49
EPB42-206ENST00000567019 MYH8P13535 1937 aa18.11■□□□□ 0.49
EPB42-206ENST00000567019 SH2B2O14492 632 aaPredicted RBP18.11■□□□□ 0.49
EPB42-206ENST00000567019 DDNO94850 711 aaPredicted RBP18.11■□□□□ 0.49
EPB42-206ENST00000567019 LIFRP42702 1097 aa18.11■□□□□ 0.49
EPB42-206ENST00000567019 TNNI2P48788 182 aa18.11■□□□□ 0.49
EPB42-206ENST00000567019 APOBRQ0VD83 1088 aa18.11■□□□□ 0.49
EPB42-206ENST00000567019 CUL4AQ13619 759 aa18.11■□□□□ 0.49
EPB42-206ENST00000567019 KIF4BQ2VIQ3 1234 aa18.11■□□□□ 0.49
EPB42-206ENST00000567019 TBC1D10BQ4KMP7 808 aaPredicted RBP18.11■□□□□ 0.49
EPB42-206ENST00000567019 FAM83AQ86UY5 434 aa18.11■□□□□ 0.49
EPB42-206ENST00000567019 CRACR2BQ8N4Y2 399 aaPredicted RBP18.11■□□□□ 0.49
EPB42-206ENST00000567019 NKX2-3Q8TAU0 364 aa18.11■□□□□ 0.49
EPB42-206ENST00000567019 IGDCC4Q8TDY8 1250 aa18.11■□□□□ 0.49
EPB42-206ENST00000567019 NAP1L2Q9ULW6 460 aaPredicted RBP18.11■□□□□ 0.49
EPB42-206ENST00000567019 SRCAPQ6ZRS2 3230 aa18.1■□□□□ 0.49
EPB42-206ENST00000567019 ATRNL1Q5VV63 1379 aa18.1■□□□□ 0.49
EPB42-206ENST00000567019 TSPY3P0CV98 308 aa18.1■□□□□ 0.49
EPB42-206ENST00000567019 TSPY8P0CW00 308 aa18.1■□□□□ 0.49
EPB42-206ENST00000567019 TNFAIP1Q13829 316 aa18.1■□□□□ 0.49
EPB42-206ENST00000567019 WTAPQ15007 396 aa18.1■□□□□ 0.49
EPB42-206ENST00000567019 ME3Q16798 604 aa18.1■□□□□ 0.49
EPB42-206ENST00000567019 NFXL1Q6ZNB6 911 aa18.1■□□□□ 0.49
EPB42-206ENST00000567019 FOXP4Q8IVH2 680 aaPredicted RBP18.1■□□□□ 0.49
EPB42-206ENST00000567019 CHMP4CQ96CF2 233 aa18.1■□□□□ 0.49
EPB42-206ENST00000567019 ZNF274Q96GC6 653 aaPredicted RBP18.1■□□□□ 0.49
EPB42-206ENST00000567019 INTS4Q96HW7 963 aaKnown RBP18.1■□□□□ 0.49
EPB42-206ENST00000567019 ZSCAN10Q96SZ4 725 aaPredicted RBP18.1■□□□□ 0.49
EPB42-206ENST00000567019 DDTLA6NHG4 134 aaPredicted RBP18.09■□□□□ 0.49
EPB42-206ENST00000567019 EVCP57679 992 aa18.09■□□□□ 0.49
EPB42-206ENST00000567019 TFAP4Q01664 338 aa18.09■□□□□ 0.49
EPB42-206ENST00000567019 GABPAQ06546 454 aa18.09■□□□□ 0.49
EPB42-206ENST00000567019 CCDC178Q5BJE1 867 aa18.09■□□□□ 0.49
EPB42-206ENST00000567019 FAM47AQ5JRC9 791 aa18.09■□□□□ 0.49
EPB42-206ENST00000567019 SLC44A5Q8NCS7 719 aa18.09■□□□□ 0.49
EPB42-206ENST00000567019 ZKSCAN3Q9BRR0 538 aa18.09■□□□□ 0.49
EPB42-206ENST00000567019 SLKQ9H2G2 1235 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms