RNA–Protein interactions for RNA: ENST00000566882.5

CCNDBP1-210, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 2,746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-210ENST00000566882 SEMA3EO15041 775 aa11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 WDHD1O75717 1129 aaPredicted RBP11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 UFL1O94874 794 aa11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 RTN1Q16799 776 aa11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 DZIP1Q86YF9 867 aaKnown RBP11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 SH3RF3Q8TEJ3 882 aaPredicted RBP11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 BRIP1Q9BX63 1249 aa11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 POLRMTO00411 1230 aaKnown RBP11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 NDUFA8P51970 172 aa11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 SSRP1Q08945 709 aaKnown RBP11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 STK38Q15208 465 aa11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 CRY2Q49AN0 593 aa11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 RBM43Q6ZSC3 357 aaKnown RBP11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 FANCBQ8NB91 859 aa11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 DYNLL2Q96FJ2 89 aa11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 DNAJC25Q9H1X3 360 aa11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 POLLQ9UGP5 575 aa11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 CCDC88AQ3V6T2 1871 aa11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 XDHP47989 1333 aa11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 BTBD18B2RXH4 712 aa11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 PLEKHA8P1O95397 391 aa11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 FMNL1O95466 1100 aaPredicted RBP11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 ADRA2BP18089 450 aa11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 SF3A1Q15459 793 aaKnown RBP11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 TDRD7Q8NHU6 1098 aaKnown RBP11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 ESR2Q92731 530 aa11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 ZSCAN10Q96SZ4 725 aaPredicted RBP11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 RNF41Q9H4P4 317 aaPredicted RBP11.8□□□□□ -0.52
CCNDBP1-210ENST00000566882 MROH7-TTC4A0A0A0MT08 1334 aa11.79□□□□□ -0.52
CCNDBP1-210ENST00000566882 ERICH2A1L162 156 aa11.79□□□□□ -0.52
CCNDBP1-210ENST00000566882 IFNAR1P17181 557 aa11.79□□□□□ -0.52
CCNDBP1-210ENST00000566882 ANO1Q5XXA6 986 aa11.79□□□□□ -0.52
CCNDBP1-210ENST00000566882 SYNE3Q6ZMZ3 975 aa11.79□□□□□ -0.52
CCNDBP1-210ENST00000566882 OXER1Q8TDS5 423 aa11.79□□□□□ -0.52
CCNDBP1-210ENST00000566882 CBX8Q9HC52 389 aa11.79□□□□□ -0.52
CCNDBP1-210ENST00000566882 NOL7Q9UMY1 257 aaKnown RBP11.79□□□□□ -0.52
CCNDBP1-210ENST00000566882 SPTLC2O15270 562 aa11.79□□□□□ -0.52
CCNDBP1-210ENST00000566882 CDKL5O76039 1030 aa11.79□□□□□ -0.52
CCNDBP1-210ENST00000566882 NR5A1Q13285 461 aa11.79□□□□□ -0.52
CCNDBP1-210ENST00000566882 SART3Q15020 963 aaKnown RBP11.79□□□□□ -0.52
CCNDBP1-210ENST00000566882 C11orf57Q6ZUT1 292 aaPredicted RBP11.79□□□□□ -0.52
CCNDBP1-210ENST00000566882 CRACR2BQ8N4Y2 399 aaPredicted RBP11.79□□□□□ -0.52
CCNDBP1-210ENST00000566882 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.79□□□□□ -0.52
CCNDBP1-210ENST00000566882 KIAA1551Q9HCM1 1747 aa11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 FAM205CA6NFA0 338 aa11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 PTMAP06454 111 aaKnown RBP11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 LDHBP07195 334 aaKnown RBP11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 KCNA4P22459 653 aa11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 ST5P78524 1137 aa11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 AXDND1Q5T1B0 1012 aaPredicted RBP11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 CPLX2Q6PUV4 134 aaKnown RBP11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 BRAPQ7Z569 592 aa11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 FMR1NBQ8N0W7 255 aaPredicted RBP11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 C17orf53Q8N3J3 647 aaPredicted RBP11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 SLC44A5Q8NCS7 719 aa11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 CLIC6Q96NY7 704 aa11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 CRNKL1Q9BZJ0 848 aaKnown RBP11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 POLR3EQ9NVU0 708 aa11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 MCM9Q9NXL9 1143 aa11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 LEMD3Q9Y2U8 911 aa11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 PDS5AQ29RF7 1337 aaKnown RBP11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 VEGFAP15692 232 aaPredicted RBP11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 FAM160A1Q05DH4 1040 aa11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 UVSSAQ2YD98 709 aa11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 SLC27A3Q5K4L6 730 aa11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 COL23A1Q86Y22 540 aaPredicted RBP11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 PIBF1Q8WXW3 757 aa11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 CD209Q9NNX6 404 aa11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 SAP30BPQ9UHR5 308 aaKnown RBP11.78□□□□□ -0.52
CCNDBP1-210ENST00000566882 TOB1P50616 345 aaPredicted RBP11.77□□□□□ -0.52
CCNDBP1-210ENST00000566882 GNL2Q13823 731 aaKnown RBP11.77□□□□□ -0.52
CCNDBP1-210ENST00000566882 NOM1Q5C9Z4 860 aaKnown RBP11.77□□□□□ -0.52
CCNDBP1-210ENST00000566882 SPECC1Q5M775 1068 aa11.77□□□□□ -0.52
CCNDBP1-210ENST00000566882 IFIT1BQ5T764 474 aaKnown RBP11.77□□□□□ -0.52
CCNDBP1-210ENST00000566882 MSL1Q68DK7 614 aa11.77□□□□□ -0.52
CCNDBP1-210ENST00000566882 ADALQ6DHV7 355 aa11.77□□□□□ -0.52
CCNDBP1-210ENST00000566882 CCDC73Q6ZRK6 1079 aa11.77□□□□□ -0.52
CCNDBP1-210ENST00000566882 MRPS27Q92552 414 aaKnown RBP11.77□□□□□ -0.52
CCNDBP1-210ENST00000566882 MAP3K14Q99558 947 aa11.77□□□□□ -0.52
CCNDBP1-210ENST00000566882 RIMBP2O15034 1052 aa11.77□□□□□ -0.53
CCNDBP1-210ENST00000566882 ADAMTS3O15072 1205 aa11.77□□□□□ -0.53
CCNDBP1-210ENST00000566882 FGRP09769 529 aa11.77□□□□□ -0.53
CCNDBP1-210ENST00000566882 PTPAQ15257 358 aa11.77□□□□□ -0.53
CCNDBP1-210ENST00000566882 ATL3Q6DD88 541 aa11.77□□□□□ -0.53
CCNDBP1-210ENST00000566882 FAM200AQ8TCP9 573 aa11.77□□□□□ -0.53
CCNDBP1-210ENST00000566882 TGFBRAP1Q8WUH2 860 aa11.77□□□□□ -0.53
CCNDBP1-210ENST00000566882 MKRN1Q9UHC7 482 aaKnown RBP11.77□□□□□ -0.53
CCNDBP1-210ENST00000566882 ZKSCAN5Q9Y2L8 839 aa11.77□□□□□ -0.53
CCNDBP1-210ENST00000566882 MYH6P13533 1939 aa11.77□□□□□ -0.53
CCNDBP1-210ENST00000566882 LAMB1P07942 1786 aa11.76□□□□□ -0.53
CCNDBP1-210ENST00000566882 MAST2Q6P0Q8 1798 aa11.76□□□□□ -0.53
CCNDBP1-210ENST00000566882 ATP2B1P20020 1258 aa11.76□□□□□ -0.53
CCNDBP1-210ENST00000566882 U2AF2P26368 475 aaKnown RBP eCLIP11.76□□□□□ -0.53
CCNDBP1-210ENST00000566882 PLCD1P51178 756 aa11.76□□□□□ -0.53
CCNDBP1-210ENST00000566882 GRIN1Q05586 938 aa11.76□□□□□ -0.53
CCNDBP1-210ENST00000566882 FUT2Q10981 343 aa11.76□□□□□ -0.53
CCNDBP1-210ENST00000566882 TROAPQ12815 778 aa11.76□□□□□ -0.53
CCNDBP1-210ENST00000566882 PKN1Q16512 942 aa11.76□□□□□ -0.53
CCNDBP1-210ENST00000566882 EARS2Q5JPH6 523 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms