RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 SLC4A8Q2Y0W8 1093 aa23.39■■□□□ 1.33
CCDC113-204ENST00000566498 NOM1Q5C9Z4 860 aaKnown RBP23.39■■□□□ 1.33
CCDC113-204ENST00000566498 FOXP4Q8IVH2 680 aaPredicted RBP23.39■■□□□ 1.33
CCDC113-204ENST00000566498 FAM43AQ8N2R8 423 aa23.39■■□□□ 1.33
CCDC113-204ENST00000566498 ABHD8Q96I13 439 aa23.39■■□□□ 1.33
CCDC113-204ENST00000566498 ZFYVE28Q9HCC9 887 aa23.39■■□□□ 1.33
CCDC113-204ENST00000566498 HERC5Q9UII4 1024 aaKnown RBP23.39■■□□□ 1.33
CCDC113-204ENST00000566498 HLA-DOAP06340 250 aa23.38■■□□□ 1.33
CCDC113-204ENST00000566498 TAF1CQ15572 869 aaPredicted RBP23.38■■□□□ 1.33
CCDC113-204ENST00000566498 CTU1Q7Z7A3 348 aaKnown RBP23.38■■□□□ 1.33
CCDC113-204ENST00000566498 COL2A1P02458 1487 aaPredicted RBP23.37■■□□□ 1.33
CCDC113-204ENST00000566498 BTBD19C9JJ37 291 aa23.37■■□□□ 1.33
CCDC113-204ENST00000566498 CXCL11O14625 94 aa23.37■■□□□ 1.33
CCDC113-204ENST00000566498 AAMPQ13685 434 aa23.37■■□□□ 1.33
CCDC113-204ENST00000566498 ANKRD45Q5TZF3 282 aa23.37■■□□□ 1.33
CCDC113-204ENST00000566498 KCNH4Q9UQ05 1017 aa23.37■■□□□ 1.33
CCDC113-204ENST00000566498 LAMB1P07942 1786 aa23.37■■□□□ 1.33
CCDC113-204ENST00000566498 TSHZ3Q63HK5 1081 aa23.36■■□□□ 1.33
CCDC113-204ENST00000566498 RIOK1Q9BRS2 568 aaKnown RBP23.36■■□□□ 1.33
CCDC113-204ENST00000566498 CRNKL1Q9BZJ0 848 aaKnown RBP23.36■■□□□ 1.33
CCDC113-204ENST00000566498 CDK5RAP2Q96SN8 1893 aa23.36■■□□□ 1.33
CCDC113-204ENST00000566498 TCRBV5S4A2TA0A5A2 114 aa23.35■■□□□ 1.33
CCDC113-204ENST00000566498 ADD2P35612 726 aa23.35■■□□□ 1.33
CCDC113-204ENST00000566498 CAP2P40123 477 aa23.35■■□□□ 1.33
CCDC113-204ENST00000566498 SLFNL1Q499Z3 407 aa23.35■■□□□ 1.33
CCDC113-204ENST00000566498 ZSCAN25Q6NSZ9 544 aa23.35■■□□□ 1.33
CCDC113-204ENST00000566498 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.35■■□□□ 1.33
CCDC113-204ENST00000566498 AFG3L2Q9Y4W6 797 aa23.35■■□□□ 1.33
CCDC113-204ENST00000566498 TRIM75PA6NK02 468 aa23.34■■□□□ 1.33
CCDC113-204ENST00000566498 CCDC85CA6NKD9 419 aa23.34■■□□□ 1.33
CCDC113-204ENST00000566498 POLR3DP05423 398 aaPredicted RBP23.34■■□□□ 1.33
CCDC113-204ENST00000566498 HDAC1Q13547 482 aaPredicted RBP23.34■■□□□ 1.33
CCDC113-204ENST00000566498 TTC6Q86TZ1 520 aa23.34■■□□□ 1.33
CCDC113-204ENST00000566498 EXOC6Q8TAG9 804 aa23.34■■□□□ 1.33
CCDC113-204ENST00000566498 GCC1Q96CN9 775 aa23.34■■□□□ 1.33
CCDC113-204ENST00000566498 ZCCHC17Q9NP64 241 aaKnown RBP23.34■■□□□ 1.33
CCDC113-204ENST00000566498 SP3Q02447 781 aa23.33■■□□□ 1.33
CCDC113-204ENST00000566498 RRP1BQ14684 758 aaKnown RBP23.33■■□□□ 1.33
CCDC113-204ENST00000566498 FASTKD5Q7L8L6 764 aaKnown RBP23.33■■□□□ 1.33
CCDC113-204ENST00000566498 CCDC84Q86UT8 332 aaPredicted RBP23.33■■□□□ 1.33
CCDC113-204ENST00000566498 RWDD1Q9H446 243 aaPredicted RBP23.33■■□□□ 1.33
CCDC113-204ENST00000566498 ARMT1Q9H993 441 aa23.33■■□□□ 1.33
CCDC113-204ENST00000566498 FOCADQ5VW36 1801 aa23.33■■□□□ 1.32
CCDC113-204ENST00000566498 PDHXO00330 501 aa23.32■■□□□ 1.32
CCDC113-204ENST00000566498 ERC2O15083 957 aa23.32■■□□□ 1.32
CCDC113-204ENST00000566498 PKN2Q16513 984 aaKnown RBP23.32■■□□□ 1.32
CCDC113-204ENST00000566498 GADL1Q6ZQY3 521 aa23.32■■□□□ 1.32
CCDC113-204ENST00000566498 ANKRD23Q86SG2 305 aa23.32■■□□□ 1.32
CCDC113-204ENST00000566498 METTL16Q86W50 562 aaKnown RBP23.32■■□□□ 1.32
CCDC113-204ENST00000566498 LCORLQ8N3X6 602 aa23.32■■□□□ 1.32
CCDC113-204ENST00000566498 MYH1P12882 1939 aa23.31■■□□□ 1.32
CCDC113-204ENST00000566498 MBD4O95243 580 aa23.31■■□□□ 1.32
CCDC113-204ENST00000566498 SPP2Q13103 211 aa23.31■■□□□ 1.32
CCDC113-204ENST00000566498 UBE3CQ15386 1083 aa23.31■■□□□ 1.32
CCDC113-204ENST00000566498 OTUD7AQ8TE49 926 aaPredicted RBP23.31■■□□□ 1.32
CCDC113-204ENST00000566498 SDR42E1Q8WUS8 393 aa23.31■■□□□ 1.32
CCDC113-204ENST00000566498 ERO1AQ96HE7 468 aa23.31■■□□□ 1.32
CCDC113-204ENST00000566498 MCM9Q9NXL9 1143 aa23.31■■□□□ 1.32
CCDC113-204ENST00000566498 TTC41PQ6P2S7 1318 aa23.31■■□□□ 1.32
CCDC113-204ENST00000566498 DOCK1Q14185 1865 aa23.3■■□□□ 1.32
CCDC113-204ENST00000566498 A0A0G2JLL6 359 aaPredicted RBP23.3■■□□□ 1.32
CCDC113-204ENST00000566498 USP17L5A8MUK1 530 aa23.3■■□□□ 1.32
CCDC113-204ENST00000566498 CHGBP05060 677 aa23.3■■□□□ 1.32
CCDC113-204ENST00000566498 PRRT2Q7Z6L0 340 aaPredicted RBP23.3■■□□□ 1.32
CCDC113-204ENST00000566498 SERPINB13Q9UIV8 391 aa23.3■■□□□ 1.32
CCDC113-204ENST00000566498 TLR2O60603 784 aa23.29■■□□□ 1.32
CCDC113-204ENST00000566498 ASNSP08243 561 aa23.29■■□□□ 1.32
CCDC113-204ENST00000566498 PLCD1P51178 756 aa23.29■■□□□ 1.32
CCDC113-204ENST00000566498 MOGSQ13724 837 aa23.29■■□□□ 1.32
CCDC113-204ENST00000566498 KBTBD3Q8NAB2 608 aa23.29■■□□□ 1.32
CCDC113-204ENST00000566498 ZNF280CQ8ND82 737 aa23.29■■□□□ 1.32
CCDC113-204ENST00000566498 CD99L2Q8TCZ2 262 aa23.29■■□□□ 1.32
CCDC113-204ENST00000566498 DNAJC18Q9H819 358 aa23.29■■□□□ 1.32
CCDC113-204ENST00000566498 AS3MTQ9HBK9 375 aa23.29■■□□□ 1.32
CCDC113-204ENST00000566498 TRIM17Q9Y577 477 aa23.29■■□□□ 1.32
CCDC113-204ENST00000566498 GLRX3O76003 335 aaKnown RBP23.28■■□□□ 1.32
CCDC113-204ENST00000566498 GDF11O95390 407 aa23.28■■□□□ 1.32
CCDC113-204ENST00000566498 MX1P20591 662 aa23.28■■□□□ 1.32
CCDC113-204ENST00000566498 GPAT2Q6NUI2 795 aa23.28■■□□□ 1.32
CCDC113-204ENST00000566498 TBC1D2Q9BYX2 928 aa23.28■■□□□ 1.32
CCDC113-204ENST00000566498 DCP1AQ9NPI6 582 aaPredicted RBP23.28■■□□□ 1.32
CCDC113-204ENST00000566498 PRKAB2O43741 272 aa23.27■■□□□ 1.32
CCDC113-204ENST00000566498 ARHGEF6Q15052 776 aa23.27■■□□□ 1.32
CCDC113-204ENST00000566498 B4GALNT3Q6L9W6 998 aa23.27■■□□□ 1.32
CCDC113-204ENST00000566498 DDRGK1Q96HY6 314 aa23.27■■□□□ 1.32
CCDC113-204ENST00000566498 PUS7LQ9H0K6 701 aaKnown RBP23.27■■□□□ 1.32
CCDC113-204ENST00000566498 EHD4Q9H223 541 aa23.27■■□□□ 1.32
CCDC113-204ENST00000566498 ATP8A2Q9NTI2 1148 aa23.27■■□□□ 1.32
CCDC113-204ENST00000566498 JAG1P78504 1218 aa23.26■■□□□ 1.31
CCDC113-204ENST00000566498 KIF22Q14807 665 aa23.26■■□□□ 1.31
CCDC113-204ENST00000566498 LRRFIP1Q32MZ4 808 aaKnown RBP23.26■■□□□ 1.31
CCDC113-204ENST00000566498 CERKLQ49MI3 558 aaPredicted RBP23.26■■□□□ 1.31
CCDC113-204ENST00000566498 EFCC1Q9HA90 598 aa23.26■■□□□ 1.31
CCDC113-204ENST00000566498 GINM1Q9NU53 330 aa23.26■■□□□ 1.31
CCDC113-204ENST00000566498 CPA4Q9UI42 421 aa23.26■■□□□ 1.31
CCDC113-204ENST00000566498 SLC4A4Q9Y6R1 1079 aa23.26■■□□□ 1.31
CCDC113-204ENST00000566498 SIPA1L1O43166 1804 aa23.26■■□□□ 1.31
CCDC113-204ENST00000566498 ATAD5Q96QE3 1844 aa23.25■■□□□ 1.31
CCDC113-204ENST00000566498 RNF113AO15541 343 aaKnown RBP23.25■■□□□ 1.31
CCDC113-204ENST00000566498 TATDN1Q6P1N9 297 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms