RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 CMTR1Q8N1G2 835 aaKnown RBP13.3□□□□□ -0.28
LINC00562-201ENST00000566385 ENAHQ8N8S7 591 aaPredicted RBP13.3□□□□□ -0.28
LINC00562-201ENST00000566385 SLC44A5Q8NCS7 719 aa13.3□□□□□ -0.28
LINC00562-201ENST00000566385 SLC12A7Q9Y666 1083 aa13.3□□□□□ -0.28
LINC00562-201ENST00000566385 CCDC69A6NI79 296 aa13.29□□□□□ -0.28
LINC00562-201ENST00000566385 CPLX1O14810 134 aa13.29□□□□□ -0.28
LINC00562-201ENST00000566385 NCLP19338 710 aaKnown RBP13.29□□□□□ -0.28
LINC00562-201ENST00000566385 HMGN5P82970 282 aaKnown RBP13.29□□□□□ -0.28
LINC00562-201ENST00000566385 NTRK3Q16288 839 aa13.29□□□□□ -0.28
LINC00562-201ENST00000566385 TEX11Q8IYF3 940 aa13.29□□□□□ -0.28
LINC00562-201ENST00000566385 TTLL6Q8N841 843 aa13.29□□□□□ -0.28
LINC00562-201ENST00000566385 AIFM3Q96NN9 605 aa13.29□□□□□ -0.28
LINC00562-201ENST00000566385 NOL10Q9BSC4 688 aaKnown RBP13.29□□□□□ -0.28
LINC00562-201ENST00000566385 UBAC1Q9BSL1 405 aa13.29□□□□□ -0.28
LINC00562-201ENST00000566385 DLEC1Q9Y238 1755 aa13.29□□□□□ -0.28
LINC00562-201ENST00000566385 FIBPO43427 364 aa13.29□□□□□ -0.28
LINC00562-201ENST00000566385 R3HDM1Q15032 1099 aaKnown RBP13.29□□□□□ -0.28
LINC00562-201ENST00000566385 KIAA0825Q8IV33 1275 aa13.29□□□□□ -0.28
LINC00562-201ENST00000566385 CCDC82Q8N4S0 544 aa13.29□□□□□ -0.28
LINC00562-201ENST00000566385 ZSCAN10Q96SZ4 725 aaPredicted RBP13.29□□□□□ -0.28
LINC00562-201ENST00000566385 NAV1Q8NEY1 1877 aa13.28□□□□□ -0.28
LINC00562-201ENST00000566385 H3BQV1 296 aa13.28□□□□□ -0.28
LINC00562-201ENST00000566385 KLHL40Q2TBA0 621 aa13.28□□□□□ -0.28
LINC00562-201ENST00000566385 IFFO2Q5TF58 517 aa13.28□□□□□ -0.28
LINC00562-201ENST00000566385 CCDC125Q86Z20 511 aa13.28□□□□□ -0.28
LINC00562-201ENST00000566385 ORC3Q9UBD5 711 aaPredicted RBP13.28□□□□□ -0.28
LINC00562-201ENST00000566385 ZNF646O15015 1829 aaPredicted RBP13.28□□□□□ -0.28
LINC00562-201ENST00000566385 FLT1P17948 1338 aa13.28□□□□□ -0.28
LINC00562-201ENST00000566385 GOLGA8AA7E2F4 631 aa13.28□□□□□ -0.28
LINC00562-201ENST00000566385 YDJCA8MPS7 323 aa13.28□□□□□ -0.28
LINC00562-201ENST00000566385 IGSF3O75054 1194 aa13.28□□□□□ -0.28
LINC00562-201ENST00000566385 KIAA2012Q0VF49 1180 aa13.28□□□□□ -0.28
LINC00562-201ENST00000566385 SART3Q15020 963 aaKnown RBP13.28□□□□□ -0.28
LINC00562-201ENST00000566385 DDX4Q9NQI0 724 aaKnown RBP13.28□□□□□ -0.28
LINC00562-201ENST00000566385 RBM27Q9P2N5 1060 aaKnown RBP13.28□□□□□ -0.28
LINC00562-201ENST00000566385 TFIP11Q9UBB9 837 aaKnown RBP13.28□□□□□ -0.28
LINC00562-201ENST00000566385 ERICH2A1L162 156 aa13.27□□□□□ -0.29
LINC00562-201ENST00000566385 ORC4O43929 436 aa13.27□□□□□ -0.29
LINC00562-201ENST00000566385 DHX16O60231 1041 aaKnown RBP13.27□□□□□ -0.29
LINC00562-201ENST00000566385 RESTQ13127 1097 aa13.27□□□□□ -0.29
LINC00562-201ENST00000566385 PICALMQ13492 652 aa13.27□□□□□ -0.29
LINC00562-201ENST00000566385 SKOR2Q2VWA4 1001 aaPredicted RBP13.27□□□□□ -0.29
LINC00562-201ENST00000566385 DACT2Q5SW24 774 aa13.27□□□□□ -0.29
LINC00562-201ENST00000566385 ILDR1Q86SU0 546 aaPredicted RBP13.27□□□□□ -0.29
LINC00562-201ENST00000566385 NUP133Q8WUM0 1156 aa13.27□□□□□ -0.29
LINC00562-201ENST00000566385 POLR3DP05423 398 aaPredicted RBP13.27□□□□□ -0.29
LINC00562-201ENST00000566385 ZNF654Q8IZM8 581 aa13.27□□□□□ -0.29
LINC00562-201ENST00000566385 PPP1R1BQ9UD71 204 aaPredicted RBP13.27□□□□□ -0.29
LINC00562-201ENST00000566385 MYH1P12882 1939 aa13.26□□□□□ -0.29
LINC00562-201ENST00000566385 COL4A5P29400 1685 aa13.26□□□□□ -0.29
LINC00562-201ENST00000566385 PPIP5K2O43314 1243 aa13.26□□□□□ -0.29
LINC00562-201ENST00000566385 SLURP2P0DP57 97 aa13.26□□□□□ -0.29
LINC00562-201ENST00000566385 PDE4BQ07343 736 aa13.26□□□□□ -0.29
LINC00562-201ENST00000566385 APOBEC3HQ6NTF7 200 aaKnown RBP13.26□□□□□ -0.29
LINC00562-201ENST00000566385 CAVIN1Q6NZI2 390 aaKnown RBP13.26□□□□□ -0.29
LINC00562-201ENST00000566385 IQCA1Q86XH1 822 aa13.26□□□□□ -0.29
LINC00562-201ENST00000566385 SLF2Q8IX21 1173 aa13.26□□□□□ -0.29
LINC00562-201ENST00000566385 ZNF277Q9NRM2 450 aaPredicted RBP13.26□□□□□ -0.29
LINC00562-201ENST00000566385 IL17RBQ9NRM6 502 aa13.26□□□□□ -0.29
LINC00562-201ENST00000566385 ATP6V1DQ9Y5K8 247 aa13.26□□□□□ -0.29
LINC00562-201ENST00000566385 KIF13BQ9NQT8 1826 aa13.26□□□□□ -0.29
LINC00562-201ENST00000566385 DDX60LQ5H9U9 1706 aaKnown RBP13.26□□□□□ -0.29
LINC00562-201ENST00000566385 TSPY2A6NKD2 308 aa13.25□□□□□ -0.29
LINC00562-201ENST00000566385 WDHD1O75717 1129 aaPredicted RBP13.25□□□□□ -0.29
LINC00562-201ENST00000566385 GUCY1A2P33402 732 aa13.25□□□□□ -0.29
LINC00562-201ENST00000566385 TFAP4Q01664 338 aa13.25□□□□□ -0.29
LINC00562-201ENST00000566385 STRIP1Q5VSL9 837 aa13.25□□□□□ -0.29
LINC00562-201ENST00000566385 FTOQ9C0B1 505 aaKnown RBP eCLIP13.25□□□□□ -0.29
LINC00562-201ENST00000566385 SUGT1Q9Y2Z0 365 aa13.25□□□□□ -0.29
LINC00562-201ENST00000566385 FOCADQ5VW36 1801 aa13.25□□□□□ -0.29
LINC00562-201ENST00000566385 PSDA5PKW4 1024 aaPredicted RBP13.25□□□□□ -0.29
LINC00562-201ENST00000566385 USP17L3A6NCW0 530 aa13.25□□□□□ -0.29
LINC00562-201ENST00000566385 USP17L4A6NCW7 530 aa13.25□□□□□ -0.29
LINC00562-201ENST00000566385 PCP11498 1178 aaKnown RBP13.25□□□□□ -0.29
LINC00562-201ENST00000566385 PTMSP20962 102 aa13.25□□□□□ -0.29
LINC00562-201ENST00000566385 CACNB3P54284 484 aa13.25□□□□□ -0.29
LINC00562-201ENST00000566385 IFIT1BQ5T764 474 aaKnown RBP13.25□□□□□ -0.29
LINC00562-201ENST00000566385 RCSD1Q6JBY9 416 aa13.25□□□□□ -0.29
LINC00562-201ENST00000566385 USP17L1Q7RTZ2 530 aa13.25□□□□□ -0.29
LINC00562-201ENST00000566385 FANCBQ8NB91 859 aa13.25□□□□□ -0.29
LINC00562-201ENST00000566385 CHMP4CQ96CF2 233 aa13.25□□□□□ -0.29
LINC00562-201ENST00000566385 MTA3Q9BTC8 594 aa13.25□□□□□ -0.29
LINC00562-201ENST00000566385 ECM29Q5VYK3 1845 aa13.25□□□□□ -0.29
LINC00562-201ENST00000566385 SLC3A2P08195 630 aaKnown RBP13.24□□□□□ -0.29
LINC00562-201ENST00000566385 PLCG2P16885 1265 aa13.24□□□□□ -0.29
LINC00562-201ENST00000566385 CRKP46108 304 aa13.24□□□□□ -0.29
LINC00562-201ENST00000566385 NFIAQ12857 509 aa13.24□□□□□ -0.29
LINC00562-201ENST00000566385 CDC42EP5Q6NZY7 148 aa13.24□□□□□ -0.29
LINC00562-201ENST00000566385 SYNE3Q6ZMZ3 975 aa13.24□□□□□ -0.29
LINC00562-201ENST00000566385 TTC6Q86TZ1 520 aa13.24□□□□□ -0.29
LINC00562-201ENST00000566385 TMTC2Q8N394 836 aa13.24□□□□□ -0.29
LINC00562-201ENST00000566385 MKNK2Q9HBH9 465 aa13.24□□□□□ -0.29
LINC00562-201ENST00000566385 USP40Q9NVE5 1235 aa13.24□□□□□ -0.29
LINC00562-201ENST00000566385 TMEM63CQ9P1W3 806 aa13.24□□□□□ -0.29
LINC00562-201ENST00000566385 ROBO3Q96MS0 1386 aa13.24□□□□□ -0.29
LINC00562-201ENST00000566385 PDIA4P13667 645 aaKnown RBP13.24□□□□□ -0.29
LINC00562-201ENST00000566385 TROAPQ12815 778 aa13.24□□□□□ -0.29
LINC00562-201ENST00000566385 CCDC93Q567U6 631 aa13.24□□□□□ -0.29
LINC00562-201ENST00000566385 ZFPM1Q8IX07 1006 aa13.24□□□□□ -0.29
LINC00562-201ENST00000566385 TMEM87AQ8NBN3 555 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms