RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 CSRNP1Q96S65 589 aa17.6■□□□□ 0.41
SPG7-213ENST00000566221 EHD4Q9H223 541 aa17.6■□□□□ 0.41
SPG7-213ENST00000566221 ANAPC4Q9UJX5 808 aa17.6■□□□□ 0.41
SPG7-213ENST00000566221 TAOK2Q9UL54 1235 aa17.6■□□□□ 0.41
SPG7-213ENST00000566221 SCAF8Q9UPN6 1271 aaKnown RBP17.6■□□□□ 0.41
SPG7-213ENST00000566221 PAPPA2Q9BXP8 1791 aa17.6■□□□□ 0.41
SPG7-213ENST00000566221 DOCK1Q14185 1865 aa17.59■□□□□ 0.41
SPG7-213ENST00000566221 CYP2D7A0A087X1C5 515 aa17.59■□□□□ 0.41
SPG7-213ENST00000566221 MINDY4BA8MYZ0 360 aa17.59■□□□□ 0.41
SPG7-213ENST00000566221 ADM5C9JUS6 153 aa17.59■□□□□ 0.41
SPG7-213ENST00000566221 SLC3A2P08195 630 aaKnown RBP17.59■□□□□ 0.41
SPG7-213ENST00000566221 CYP2D6P10635 497 aa17.59■□□□□ 0.41
SPG7-213ENST00000566221 NECTIN1Q15223 517 aa17.59■□□□□ 0.41
SPG7-213ENST00000566221 SLC4A8Q2Y0W8 1093 aa17.59■□□□□ 0.41
SPG7-213ENST00000566221 TEPSINQ96N21 525 aa17.59■□□□□ 0.41
SPG7-213ENST00000566221 PI4KBQ9UBF8 816 aa17.59■□□□□ 0.41
SPG7-213ENST00000566221 ZNF213O14771 459 aa17.58■□□□□ 0.4
SPG7-213ENST00000566221 HSPA4P34932 840 aa17.58■□□□□ 0.4
SPG7-213ENST00000566221 PLCD1P51178 756 aa17.58■□□□□ 0.4
SPG7-213ENST00000566221 HAND2P61296 217 aa17.58■□□□□ 0.4
SPG7-213ENST00000566221 MAP1SQ66K74 1059 aaPredicted RBP17.58■□□□□ 0.4
SPG7-213ENST00000566221 CREB3L3Q68CJ9 461 aa17.58■□□□□ 0.4
SPG7-213ENST00000566221 CHADLQ6NUI6 762 aa17.58■□□□□ 0.4
SPG7-213ENST00000566221 GLIS2Q9BZE0 524 aaPredicted RBP17.58■□□□□ 0.4
SPG7-213ENST00000566221 SERPINB13Q9UIV8 391 aa17.58■□□□□ 0.4
SPG7-213ENST00000566221 GREB1LQ9C091 1923 aaPredicted RBP17.58■□□□□ 0.4
SPG7-213ENST00000566221 SSC5DA1L4H1 1573 aa17.57■□□□□ 0.4
SPG7-213ENST00000566221 SLC27A2O14975 620 aa17.57■□□□□ 0.4
SPG7-213ENST00000566221 CYP21A2P08686 494 aa17.57■□□□□ 0.4
SPG7-213ENST00000566221 SUPT20HL1Q3ZLR7 823 aa17.57■□□□□ 0.4
SPG7-213ENST00000566221 USP48Q86UV5 1035 aa17.57■□□□□ 0.4
SPG7-213ENST00000566221 CRACR2BQ8N4Y2 399 aaPredicted RBP17.57■□□□□ 0.4
SPG7-213ENST00000566221 TRIM34Q9BYJ4 488 aa17.57■□□□□ 0.4
SPG7-213ENST00000566221 HERC5Q9UII4 1024 aaKnown RBP17.57■□□□□ 0.4
SPG7-213ENST00000566221 PCP11498 1178 aaKnown RBP17.56■□□□□ 0.4
SPG7-213ENST00000566221 ZKSCAN1P17029 563 aaPredicted RBP17.56■□□□□ 0.4
SPG7-213ENST00000566221 CTDSPL2Q05D32 466 aa17.56■□□□□ 0.4
SPG7-213ENST00000566221 NBPF12Q5TAG4 269 aaPredicted RBP17.56■□□□□ 0.4
SPG7-213ENST00000566221 C16orf86Q6ZW13 317 aa17.56■□□□□ 0.4
SPG7-213ENST00000566221 METTL16Q86W50 562 aaKnown RBP17.56■□□□□ 0.4
SPG7-213ENST00000566221 FOXP4Q8IVH2 680 aaPredicted RBP17.56■□□□□ 0.4
SPG7-213ENST00000566221 CDAN1Q8IWY9 1227 aa17.56■□□□□ 0.4
SPG7-213ENST00000566221 CDCA5Q96FF9 252 aa17.56■□□□□ 0.4
SPG7-213ENST00000566221 NBPF3Q9H094 633 aa17.56■□□□□ 0.4
SPG7-213ENST00000566221 RNF41Q9H4P4 317 aaPredicted RBP17.56■□□□□ 0.4
SPG7-213ENST00000566221 ZNF287Q9HBT7 754 aa17.56■□□□□ 0.4
SPG7-213ENST00000566221 SWAP70Q9UH65 585 aa17.56■□□□□ 0.4
SPG7-213ENST00000566221 TBC1D12O60347 775 aa17.55■□□□□ 0.4
SPG7-213ENST00000566221 NF2P35240 595 aa17.55■□□□□ 0.4
SPG7-213ENST00000566221 EVX2Q03828 476 aa17.55■□□□□ 0.4
SPG7-213ENST00000566221 GABPAQ06546 454 aa17.55■□□□□ 0.4
SPG7-213ENST00000566221 PDE4BQ07343 736 aa17.55■□□□□ 0.4
SPG7-213ENST00000566221 AKNAD1Q5T1N1 836 aa17.55■□□□□ 0.4
SPG7-213ENST00000566221 DCAF15Q66K64 600 aa17.55■□□□□ 0.4
SPG7-213ENST00000566221 TBC1D10CQ8IV04 446 aa17.55■□□□□ 0.4
SPG7-213ENST00000566221 STAG1Q8WVM7 1258 aa17.55■□□□□ 0.4
SPG7-213ENST00000566221 KCNB2Q92953 911 aa17.55■□□□□ 0.4
SPG7-213ENST00000566221 MYH4Q9Y623 1939 aa17.55■□□□□ 0.4
SPG7-213ENST00000566221 KRT32Q14532 448 aa17.54■□□□□ 0.4
SPG7-213ENST00000566221 PRAMEF18Q5VWM3 479 aa17.54■□□□□ 0.4
SPG7-213ENST00000566221 MFSD6Q6ZSS7 791 aa17.54■□□□□ 0.4
SPG7-213ENST00000566221 DYNLL2Q96FJ2 89 aa17.54■□□□□ 0.4
SPG7-213ENST00000566221 DNAJC18Q9H819 358 aa17.54■□□□□ 0.4
SPG7-213ENST00000566221 CNNM2Q9H8M5 875 aa17.54■□□□□ 0.4
SPG7-213ENST00000566221 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.54■□□□□ 0.47e-15■■■■□ 23
SPG7-213ENST00000566221 SMIM22K7EJ46 135 aa17.53■□□□□ 0.4
SPG7-213ENST00000566221 ORC4O43929 436 aa17.53■□□□□ 0.4
SPG7-213ENST00000566221 CDK8P49336 464 aa17.53■□□□□ 0.4
SPG7-213ENST00000566221 NT5C2P49902 561 aa17.53■□□□□ 0.4
SPG7-213ENST00000566221 ANAPC15P60006 121 aa17.53■□□□□ 0.4
SPG7-213ENST00000566221 MAP3K10Q02779 954 aa17.53■□□□□ 0.4
SPG7-213ENST00000566221 TSGA10IPQ3SY00 556 aa17.53■□□□□ 0.4
SPG7-213ENST00000566221 C22orf23Q9BZE7 217 aa17.53■□□□□ 0.4
SPG7-213ENST00000566221 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.53■□□□□ 0.4
SPG7-213ENST00000566221 SNX14Q9Y5W7 946 aa17.53■□□□□ 0.4
SPG7-213ENST00000566221 NEDD4P46934 1319 aa17.52■□□□□ 0.4
SPG7-213ENST00000566221 FAM196BA6NMK8 535 aa17.52■□□□□ 0.4
SPG7-213ENST00000566221 E7EWF7 191 aa17.52■□□□□ 0.4
SPG7-213ENST00000566221 TRAF5O00463 557 aa17.52■□□□□ 0.4
SPG7-213ENST00000566221 FGRP09769 529 aa17.52■□□□□ 0.4
SPG7-213ENST00000566221 RBM25P49756 843 aaKnown RBP17.52■□□□□ 0.4
SPG7-213ENST00000566221 TRDNQ13061 729 aa17.52■□□□□ 0.4
SPG7-213ENST00000566221 RASEFQ8IZ41 740 aa17.52■□□□□ 0.4
SPG7-213ENST00000566221 STK11IPQ8N1F8 1099 aa17.52■□□□□ 0.4
SPG7-213ENST00000566221 SLC44A5Q8NCS7 719 aa17.52■□□□□ 0.4
SPG7-213ENST00000566221 TBC1D32Q96NH3 1257 aa17.52■□□□□ 0.4
SPG7-213ENST00000566221 ZNF341Q9BYN7 854 aa17.52■□□□□ 0.4
SPG7-213ENST00000566221 MKNK2Q9HBH9 465 aa17.52■□□□□ 0.4
SPG7-213ENST00000566221 TSHZ2Q9NRE2 1034 aa17.52■□□□□ 0.4
SPG7-213ENST00000566221 TAF6LQ9Y6J9 622 aa17.52■□□□□ 0.4
SPG7-213ENST00000566221 SHMT1P34896 483 aa17.51■□□□□ 0.39
SPG7-213ENST00000566221 TATDN1Q6P1N9 297 aa17.51■□□□□ 0.39
SPG7-213ENST00000566221 DLK2Q6UY11 383 aa17.51■□□□□ 0.39
SPG7-213ENST00000566221 MIGA2Q7L4E1 593 aa17.51■□□□□ 0.39
SPG7-213ENST00000566221 KRT23Q9C075 422 aa17.51■□□□□ 0.39
SPG7-213ENST00000566221 TOMM22Q9NS69 142 aa17.51■□□□□ 0.39
SPG7-213ENST00000566221 PHIPQ8WWQ0 1821 aa17.51■□□□□ 0.39
SPG7-213ENST00000566221 PPP1R12BO60237 982 aaPredicted RBP17.5■□□□□ 0.39
SPG7-213ENST00000566221 ITGBL1O95965 494 aaPredicted RBP17.5■□□□□ 0.39
SPG7-213ENST00000566221 RASA1P20936 1047 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms