RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 RASEFQ8IZ41 740 aa11.57□□□□□ -0.56
SF3B3-207ENST00000566095 ZNF444Q8N0Y2 327 aaPredicted RBP11.57□□□□□ -0.56
SF3B3-207ENST00000566095 FAM151AQ8WW52 585 aa11.57□□□□□ -0.56
SF3B3-207ENST00000566095 L3MBTL3Q96JM7 780 aaPredicted RBP11.57□□□□□ -0.56
SF3B3-207ENST00000566095 AGXT2Q9BYV1 514 aa11.57□□□□□ -0.56
SF3B3-207ENST00000566095 TDRD3Q9H7E2 651 aaKnown RBP11.57□□□□□ -0.56
SF3B3-207ENST00000566095 VEZTQ9HBM0 779 aa11.57□□□□□ -0.56
SF3B3-207ENST00000566095 MKRN1Q9UHC7 482 aaKnown RBP11.57□□□□□ -0.56
SF3B3-207ENST00000566095 SERPINB13Q9UIV8 391 aa11.57□□□□□ -0.56
SF3B3-207ENST00000566095 PALD1Q9ULE6 856 aa11.57□□□□□ -0.56
SF3B3-207ENST00000566095 LIMCH1Q9UPQ0 1083 aa11.57□□□□□ -0.56
SF3B3-207ENST00000566095 GLTPD2A6NH11 291 aa11.56□□□□□ -0.56
SF3B3-207ENST00000566095 WNT10BO00744 389 aa11.56□□□□□ -0.56
SF3B3-207ENST00000566095 FOXP2O15409 715 aa11.56□□□□□ -0.56
SF3B3-207ENST00000566095 WDHD1O75717 1129 aaPredicted RBP11.56□□□□□ -0.56
SF3B3-207ENST00000566095 PTMSP20962 102 aa11.56□□□□□ -0.56
SF3B3-207ENST00000566095 PNMA8AQ86V59 439 aaPredicted RBP11.56□□□□□ -0.56
SF3B3-207ENST00000566095 ZBED3Q96IU2 234 aaPredicted RBP11.56□□□□□ -0.56
SF3B3-207ENST00000566095 PRMT6Q96LA8 375 aaPredicted RBP11.56□□□□□ -0.56
SF3B3-207ENST00000566095 CCDC17Q96LX7 622 aa11.56□□□□□ -0.56
SF3B3-207ENST00000566095 HERC5Q9UII4 1024 aaKnown RBP11.56□□□□□ -0.56
SF3B3-207ENST00000566095 HACL1Q9UJ83 578 aa11.56□□□□□ -0.56
SF3B3-207ENST00000566095 PITPNM2Q9BZ72 1349 aa11.56□□□□□ -0.56
SF3B3-207ENST00000566095 FOCADQ5VW36 1801 aa11.56□□□□□ -0.56
SF3B3-207ENST00000566095 ECM29Q5VYK3 1845 aa11.56□□□□□ -0.56
SF3B3-207ENST00000566095 ATRNL1Q5VV63 1379 aa11.55□□□□□ -0.56
SF3B3-207ENST00000566095 TSPY2A6NKD2 308 aa11.55□□□□□ -0.56
SF3B3-207ENST00000566095 RANBP6O60518 1105 aaKnown RBP11.55□□□□□ -0.56
SF3B3-207ENST00000566095 FGRP09769 529 aa11.55□□□□□ -0.56
SF3B3-207ENST00000566095 PRELPP51888 382 aa11.55□□□□□ -0.56
SF3B3-207ENST00000566095 EVCP57679 992 aa11.55□□□□□ -0.56
SF3B3-207ENST00000566095 CTDSPL2Q05D32 466 aa11.55□□□□□ -0.56
SF3B3-207ENST00000566095 RRP12Q5JTH9 1297 aaKnown RBP11.55□□□□□ -0.56
SF3B3-207ENST00000566095 C16orf86Q6ZW13 317 aa11.55□□□□□ -0.56
SF3B3-207ENST00000566095 USP50Q70EL3 339 aaPredicted RBP11.55□□□□□ -0.56
SF3B3-207ENST00000566095 ZC3H15Q8WU90 426 aaKnown RBP11.55□□□□□ -0.56
SF3B3-207ENST00000566095 UPF3BQ9BZI7 483 aaKnown RBP11.55□□□□□ -0.56
SF3B3-207ENST00000566095 SAP30BPQ9UHR5 308 aaKnown RBP11.55□□□□□ -0.56
SF3B3-207ENST00000566095 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.55□□□□□ -0.56
SF3B3-207ENST00000566095 TCP10L2B9ZVM9 353 aa11.54□□□□□ -0.56
SF3B3-207ENST00000566095 PRC1O43663 620 aa11.54□□□□□ -0.56
SF3B3-207ENST00000566095 DHX16O60231 1041 aaKnown RBP11.54□□□□□ -0.56
SF3B3-207ENST00000566095 DDNO94850 711 aaPredicted RBP11.54□□□□□ -0.56
SF3B3-207ENST00000566095 TSPY3P0CV98 308 aa11.54□□□□□ -0.56
SF3B3-207ENST00000566095 TSPY8P0CW00 308 aa11.54□□□□□ -0.56
SF3B3-207ENST00000566095 TBC1D10BQ4KMP7 808 aaPredicted RBP11.54□□□□□ -0.56
SF3B3-207ENST00000566095 RBM26Q5T8P6 1007 aaKnown RBP11.54□□□□□ -0.56
SF3B3-207ENST00000566095 DCAF15Q66K64 600 aa11.54□□□□□ -0.56
SF3B3-207ENST00000566095 TBC1D10CQ8IV04 446 aa11.54□□□□□ -0.56
SF3B3-207ENST00000566095 MB21D2Q8IYB1 491 aaPredicted RBP11.54□□□□□ -0.56
SF3B3-207ENST00000566095 DCPSQ96C86 337 aaKnown RBP11.54□□□□□ -0.56
SF3B3-207ENST00000566095 TMX3Q96JJ7 454 aa11.54□□□□□ -0.56
SF3B3-207ENST00000566095 CSRNP1Q96S65 589 aa11.54□□□□□ -0.56
SF3B3-207ENST00000566095 ANGEL1Q9UNK9 670 aaKnown RBP11.54□□□□□ -0.56
SF3B3-207ENST00000566095 MYH1P12882 1939 aa11.54□□□□□ -0.56
SF3B3-207ENST00000566095 CLRN2A0PK11 232 aa11.53□□□□□ -0.56
SF3B3-207ENST00000566095 CCDC69A6NI79 296 aa11.53□□□□□ -0.56
SF3B3-207ENST00000566095 B4E1Z4 1266 aa11.53□□□□□ -0.56
SF3B3-207ENST00000566095 IFIT3O14879 490 aaKnown RBP11.53□□□□□ -0.56
SF3B3-207ENST00000566095 KDM4AO75164 1064 aa11.53□□□□□ -0.56
SF3B3-207ENST00000566095 CALM1P0DP23 149 aa11.53□□□□□ -0.56
SF3B3-207ENST00000566095 CALM2P0DP24 149 aa11.53□□□□□ -0.56
SF3B3-207ENST00000566095 CALM3P0DP25 149 aa11.53□□□□□ -0.56
SF3B3-207ENST00000566095 NF2P35240 595 aa11.53□□□□□ -0.56
SF3B3-207ENST00000566095 RCAN1P53805 252 aa11.53□□□□□ -0.56
SF3B3-207ENST00000566095 TCP10Q12799 353 aa11.53□□□□□ -0.56
SF3B3-207ENST00000566095 WTAPQ15007 396 aa11.53□□□□□ -0.56
SF3B3-207ENST00000566095 PPP2R5BQ15173 497 aa11.53□□□□□ -0.56
SF3B3-207ENST00000566095 ADCK5Q3MIX3 580 aa11.53□□□□□ -0.56
SF3B3-207ENST00000566095 SUPT20HL1Q3ZLR7 823 aa11.53□□□□□ -0.56
SF3B3-207ENST00000566095 IFFO2Q5TF58 517 aa11.53□□□□□ -0.56
SF3B3-207ENST00000566095 CPLX2Q6PUV4 134 aaKnown RBP11.53□□□□□ -0.56
SF3B3-207ENST00000566095 NFXL1Q6ZNB6 911 aa11.53□□□□□ -0.56
SF3B3-207ENST00000566095 Q6ZUG5 572 aa11.53□□□□□ -0.56
SF3B3-207ENST00000566095 CABP5Q9NP86 173 aa11.53□□□□□ -0.56
SF3B3-207ENST00000566095 GINM1Q9NU53 330 aa11.53□□□□□ -0.56
SF3B3-207ENST00000566095 FAM198AQ9UFP1 575 aa11.53□□□□□ -0.56
SF3B3-207ENST00000566095 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.53□□□□□ -0.56
SF3B3-207ENST00000566095 KIF3AQ9Y496 699 aa11.53□□□□□ -0.56
SF3B3-207ENST00000566095 BAZ2AQ9UIF9 1905 aaKnown RBP11.52□□□□□ -0.56
SF3B3-207ENST00000566095 DDX60LQ5H9U9 1706 aaKnown RBP11.52□□□□□ -0.56
SF3B3-207ENST00000566095 CCDC196A0A1B0GTZ2 297 aa11.52□□□□□ -0.57
SF3B3-207ENST00000566095 TBC1D12O60347 775 aa11.52□□□□□ -0.57
SF3B3-207ENST00000566095 CD2BP2O95400 341 aaKnown RBP11.52□□□□□ -0.57
SF3B3-207ENST00000566095 LIFRP42702 1097 aa11.52□□□□□ -0.57
SF3B3-207ENST00000566095 CDK8P49336 464 aa11.52□□□□□ -0.57
SF3B3-207ENST00000566095 AK2P54819 239 aa11.52□□□□□ -0.57
SF3B3-207ENST00000566095 EXOSC10Q01780 885 aaKnown RBP11.52□□□□□ -0.57
SF3B3-207ENST00000566095 NFIAQ12857 509 aa11.52□□□□□ -0.57
SF3B3-207ENST00000566095 TMEM67Q5HYA8 995 aa11.52□□□□□ -0.57
SF3B3-207ENST00000566095 STOX1Q6ZVD7 989 aa11.52□□□□□ -0.57
SF3B3-207ENST00000566095 SAMD7Q7Z3H4 446 aa11.52□□□□□ -0.57
SF3B3-207ENST00000566095 SULF1Q8IWU6 871 aa11.52□□□□□ -0.57
SF3B3-207ENST00000566095 LLPHQ9BRT6 129 aaKnown RBP11.52□□□□□ -0.57
SF3B3-207ENST00000566095 DDX4Q9NQI0 724 aaKnown RBP11.52□□□□□ -0.57
SF3B3-207ENST00000566095 TCP11L1Q9NUJ3 509 aa11.52□□□□□ -0.57
SF3B3-207ENST00000566095 NEDD4P46934 1319 aa11.52□□□□□ -0.57
SF3B3-207ENST00000566095 SCN4AP35499 1836 aa11.51□□□□□ -0.57
SF3B3-207ENST00000566095 CDK5RAP2Q96SN8 1893 aa11.51□□□□□ -0.57
SF3B3-207ENST00000566095 EPHX2P34913 555 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms