RNA–Protein interactions for RNA: ENST00000565982.1

TM6SF1-208, Transcript of transmembrane 6 superfamily member 1, human

TSL 3

Gene TM6SF1, Length 856 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM6SF1-208	ENST00000565982	FGR	P09769	529 aa		32.15	■■■□□ 2.74
TM6SF1-208	ENST00000565982	RABEP1	Q15276	862 aa		32.15	■■■□□ 2.74
TM6SF1-208	ENST00000565982	TBC1D10C	Q8IV04	446 aa		32.15	■■■□□ 2.74
TM6SF1-208	ENST00000565982	SULF1	Q8IWU6	871 aa		32.15	■■■□□ 2.74
TM6SF1-208	ENST00000565982	NEK1	Q96PY6	1258 aa		32.15	■■■□□ 2.74
TM6SF1-208	ENST00000565982	CSRNP1	Q96S65	589 aa		32.15	■■■□□ 2.74
TM6SF1-208	ENST00000565982	NBPF3	Q9H094	633 aa		32.15	■■■□□ 2.74
TM6SF1-208	ENST00000565982	RRAGC	Q9HB90	399 aa		32.15	■■■□□ 2.74
TM6SF1-208	ENST00000565982	LAMA4	Q16363	1823 aa		32.14	■■■□□ 2.74
TM6SF1-208	ENST00000565982	DDTL	A6NHG4	134 aa	Predicted RBP	32.14	■■■□□ 2.74
TM6SF1-208	ENST00000565982	EAPP	Q56P03	285 aa	Predicted RBP	32.14	■■■□□ 2.74
TM6SF1-208	ENST00000565982	C16orf86	Q6ZW13	317 aa		32.14	■■■□□ 2.74
TM6SF1-208	ENST00000565982	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	32.14	■■■□□ 2.74
TM6SF1-208	ENST00000565982	JAKMIP1	Q96N16	626 aa	Known RBP	32.14	■■■□□ 2.74
TM6SF1-208	ENST00000565982	HERC5	Q9UII4	1024 aa	Known RBP	32.14	■■■□□ 2.74
TM6SF1-208	ENST00000565982	ASTN2	O75129	1339 aa	Predicted RBP	32.14	■■■□□ 2.74
TM6SF1-208	ENST00000565982	ORC4	O43929	436 aa		32.13	■■■□□ 2.73
TM6SF1-208	ENST00000565982	MKNK2	Q9HBH9	465 aa		32.13	■■■□□ 2.73
TM6SF1-208	ENST00000565982	BAZ2A	Q9UIF9	1905 aa	Known RBP	32.12	■■■□□ 2.73
TM6SF1-208	ENST00000565982	BLOC1S2	Q6QNY1	142 aa		32.12	■■■□□ 2.73
TM6SF1-208	ENST00000565982	SH3BP5L	Q7L8J4	393 aa		32.12	■■■□□ 2.73
TM6SF1-208	ENST00000565982	METTL16	Q86W50	562 aa	Known RBP	32.12	■■■□□ 2.73
TM6SF1-208	ENST00000565982	ESR2	Q92731	530 aa		32.12	■■■□□ 2.73
TM6SF1-208	ENST00000565982	KIF2C	Q99661	725 aa		32.12	■■■□□ 2.73
TM6SF1-208	ENST00000565982	TMEM39B	Q9GZU3	492 aa		32.12	■■■□□ 2.73
TM6SF1-208	ENST00000565982	CYP46A1	Q9Y6A2	500 aa		32.12	■■■□□ 2.73
TM6SF1-208	ENST00000565982	MYH1	P12882	1939 aa		32.12	■■■□□ 2.73
TM6SF1-208	ENST00000565982	LAMB1	P07942	1786 aa		32.12	■■■□□ 2.73
TM6SF1-208	ENST00000565982	UTRN	P46939	3433 aa		32.11	■■■□□ 2.73
TM6SF1-208	ENST00000565982	GABPA	Q06546	454 aa		32.11	■■■□□ 2.73
TM6SF1-208	ENST00000565982	SLC4A8	Q2Y0W8	1093 aa		32.11	■■■□□ 2.73
TM6SF1-208	ENST00000565982	ZSWIM6	Q9HCJ5	1215 aa		32.11	■■■□□ 2.73
TM6SF1-208	ENST00000565982	TOMM22	Q9NS69	142 aa		32.11	■■■□□ 2.73
TM6SF1-208	ENST00000565982	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	32.11	■■■□□ 2.73
TM6SF1-208	ENST00000565982	TAF6L	Q9Y6J9	622 aa		32.11	■■■□□ 2.73
TM6SF1-208	ENST00000565982	TBC1D12	O60347	775 aa		32.1	■■■□□ 2.73
TM6SF1-208	ENST00000565982	CAST	P20810	708 aa	Known RBP	32.1	■■■□□ 2.73
TM6SF1-208	ENST00000565982	ADCK5	Q3MIX3	580 aa		32.1	■■■□□ 2.73
TM6SF1-208	ENST00000565982	STOX1	Q6ZVD7	989 aa		32.1	■■■□□ 2.73
TM6SF1-208	ENST00000565982	CDK8	P49336	464 aa		32.09	■■■□□ 2.73
TM6SF1-208	ENST00000565982	SUPT20HL1	Q3ZLR7	823 aa		32.09	■■■□□ 2.73
TM6SF1-208	ENST00000565982	ZNF444	Q8N0Y2	327 aa	Predicted RBP	32.09	■■■□□ 2.73
TM6SF1-208	ENST00000565982	WDR19	Q8NEZ3	1342 aa		32.08	■■■□□ 2.73
TM6SF1-208	ENST00000565982	MCM5	P33992	734 aa		32.08	■■■□□ 2.73
TM6SF1-208	ENST00000565982	RUFY3	Q7L099	469 aa		32.08	■■■□□ 2.73
TM6SF1-208	ENST00000565982	DHX32	Q7L7V1	743 aa	Known RBP	32.08	■■■□□ 2.73
TM6SF1-208	ENST00000565982	KRT26	Q7Z3Y9	468 aa		32.08	■■■□□ 2.73
TM6SF1-208	ENST00000565982	LDHD	Q86WU2	507 aa		32.08	■■■□□ 2.73
TM6SF1-208	ENST00000565982	DYNLL2	Q96FJ2	89 aa		32.08	■■■□□ 2.73
TM6SF1-208	ENST00000565982	TEPSIN	Q96N21	525 aa		32.08	■■■□□ 2.73
TM6SF1-208	ENST00000565982	TSHZ2	Q9NRE2	1034 aa		32.08	■■■□□ 2.73
TM6SF1-208	ENST00000565982	CLEC11A	Q9Y240	323 aa		32.08	■■■□□ 2.73
TM6SF1-208	ENST00000565982	DCAF15	Q66K64	600 aa		32.07	■■■□□ 2.72
TM6SF1-208	ENST00000565982	CDC37L1	Q7L3B6	337 aa		32.07	■■■□□ 2.72
TM6SF1-208	ENST00000565982	MTA3	Q9BTC8	594 aa		32.07	■■■□□ 2.72
TM6SF1-208	ENST00000565982	NEDD4	P46934	1319 aa		32.06	■■■□□ 2.72
TM6SF1-208	ENST00000565982	RRP12	Q5JTH9	1297 aa	Known RBP	32.06	■■■□□ 2.72
TM6SF1-208	ENST00000565982	STK11IP	Q8N1F8	1099 aa		32.06	■■■□□ 2.72
TM6SF1-208	ENST00000565982	CCDC17	Q96LX7	622 aa		32.06	■■■□□ 2.72
TM6SF1-208	ENST00000565982	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	32.06	■■■□□ 2.72
TM6SF1-208	ENST00000565982	ST18	O60284	1047 aa		32.05	■■■□□ 2.72
TM6SF1-208	ENST00000565982	RPS6KB1	P23443	525 aa		32.05	■■■□□ 2.72
TM6SF1-208	ENST00000565982	MAP3K10	Q02779	954 aa		32.05	■■■□□ 2.72
TM6SF1-208	ENST00000565982	ZNF526	Q8TF50	670 aa	Predicted RBP	32.05	■■■□□ 2.72
TM6SF1-208	ENST00000565982	NMRK2	Q9NPI5	230 aa		32.05	■■■□□ 2.72
TM6SF1-208	ENST00000565982		B4E1Z4	1266 aa		32.04	■■■□□ 2.72
TM6SF1-208	ENST00000565982	RANBP6	O60518	1105 aa	Known RBP	32.04	■■■□□ 2.72
TM6SF1-208	ENST00000565982	NEK4	P51957	841 aa		32.04	■■■□□ 2.72
TM6SF1-208	ENST00000565982	EVX2	Q03828	476 aa		32.04	■■■□□ 2.72
TM6SF1-208	ENST00000565982	SART3	Q15020	963 aa	Known RBP	32.04	■■■□□ 2.72
TM6SF1-208	ENST00000565982	CCDC178	Q5BJE1	867 aa		32.04	■■■□□ 2.72
TM6SF1-208	ENST00000565982	MB21D2	Q8IYB1	491 aa	Predicted RBP	32.04	■■■□□ 2.72
TM6SF1-208	ENST00000565982	SMIM22	K7EJ46	135 aa		32.03	■■■□□ 2.72
TM6SF1-208	ENST00000565982	KDM4A	O75164	1064 aa		32.03	■■■□□ 2.72
TM6SF1-208	ENST00000565982	TATDN1	Q6P1N9	297 aa		32.03	■■■□□ 2.72
TM6SF1-208	ENST00000565982	IQCA1	Q86XH1	822 aa		32.03	■■■□□ 2.72
TM6SF1-208	ENST00000565982	TSPY2	A6NKD2	308 aa		32.02	■■■□□ 2.72
TM6SF1-208	ENST00000565982	PRDM1	O75626	825 aa		32.02	■■■□□ 2.72
TM6SF1-208	ENST00000565982	RASA1	P20936	1047 aa		32.02	■■■□□ 2.72
TM6SF1-208	ENST00000565982	NF2	P35240	595 aa		32.02	■■■□□ 2.72
TM6SF1-208	ENST00000565982	UPF3B	Q9BZI7	483 aa	Known RBP	32.02	■■■□□ 2.72
TM6SF1-208	ENST00000565982	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	32.02	■■■□□ 2.72
TM6SF1-208	ENST00000565982	GPBP1L1	Q9HC44	474 aa	Predicted RBP	32.02	■■■□□ 2.72
TM6SF1-208	ENST00000565982	INCENP	Q9NQS7	918 aa		32.02	■■■□□ 2.72
TM6SF1-208	ENST00000565982	TACC3	Q9Y6A5	838 aa		32.02	■■■□□ 2.72
TM6SF1-208	ENST00000565982	SHMT1	P34896	483 aa		32.01	■■■□□ 2.71
TM6SF1-208	ENST00000565982	EXOSC10	Q01780	885 aa	Known RBP	32.01	■■■□□ 2.71
TM6SF1-208	ENST00000565982	ANKRD1	Q15327	319 aa		32.01	■■■□□ 2.71
TM6SF1-208	ENST00000565982	SLC44A5	Q8NCS7	719 aa		32.01	■■■□□ 2.71
TM6SF1-208	ENST00000565982	TMEM87B	Q96K49	555 aa		32.01	■■■□□ 2.71
TM6SF1-208	ENST00000565982	PDRG1	Q9NUG6	133 aa		32.01	■■■□□ 2.71
TM6SF1-208	ENST00000565982	ZSWIM5	Q9P217	1185 aa		32.01	■■■□□ 2.71
TM6SF1-208	ENST00000565982	SCAF8	Q9UPN6	1271 aa	Known RBP	32.01	■■■□□ 2.71
TM6SF1-208	ENST00000565982	PRC1	O43663	620 aa		32	■■■□□ 2.71
TM6SF1-208	ENST00000565982	TSPY3	P0CV98	308 aa		32	■■■□□ 2.71
TM6SF1-208	ENST00000565982	TSPY8	P0CW00	308 aa		32	■■■□□ 2.71
TM6SF1-208	ENST00000565982	CERKL	Q49MI3	558 aa	Predicted RBP	32	■■■□□ 2.71
TM6SF1-208	ENST00000565982	PPP4R3B	Q5MIZ7	849 aa		32	■■■□□ 2.71
TM6SF1-208	ENST00000565982	NBPF12	Q5TAG4	269 aa	Predicted RBP	32	■■■□□ 2.71
TM6SF1-208	ENST00000565982	USP48	Q86UV5	1035 aa		32	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms