RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.72■□□□□ 0.274e-7■□□□□ 11
HERPUD1-210ENST00000565966 TESPA1A2RU30 521 aaPredicted RBP16.71■□□□□ 0.27
HERPUD1-210ENST00000565966 SLURP2P0DP57 97 aa16.71■□□□□ 0.27
HERPUD1-210ENST00000565966 GTF2A2P52657 109 aa16.71■□□□□ 0.27
HERPUD1-210ENST00000565966 PPIL2Q13356 520 aa16.71■□□□□ 0.27
HERPUD1-210ENST00000565966 UBE3CQ15386 1083 aa16.71■□□□□ 0.27
HERPUD1-210ENST00000565966 OTUD7BQ6GQQ9 843 aa16.71■□□□□ 0.27
HERPUD1-210ENST00000565966 MS4A4AQ96JQ5 239 aa16.71■□□□□ 0.27
HERPUD1-210ENST00000565966 HERC5Q9UII4 1024 aaKnown RBP16.71■□□□□ 0.27
HERPUD1-210ENST00000565966 PHIPQ8WWQ0 1821 aa16.7■□□□□ 0.26
HERPUD1-210ENST00000565966 NAV1Q8NEY1 1877 aa16.7■□□□□ 0.26
HERPUD1-210ENST00000565966 CTNND1O60716 968 aaKnown RBP16.7■□□□□ 0.26
HERPUD1-210ENST00000565966 SLFNL1Q499Z3 407 aa16.7■□□□□ 0.26
HERPUD1-210ENST00000565966 FOXP4Q8IVH2 680 aaPredicted RBP16.7■□□□□ 0.26
HERPUD1-210ENST00000565966 SCYL3Q8IZE3 742 aa16.7■□□□□ 0.26
HERPUD1-210ENST00000565966 KBTBD3Q8NAB2 608 aa16.7■□□□□ 0.26
HERPUD1-210ENST00000565966 PALD1Q9ULE6 856 aa16.7■□□□□ 0.26
HERPUD1-210ENST00000565966 BAZ2AQ9UIF9 1905 aaKnown RBP16.7■□□□□ 0.26
HERPUD1-210ENST00000565966 PTPRFP10586 1907 aa16.69■□□□□ 0.26
HERPUD1-210ENST00000565966 IRF6O14896 467 aa16.69■□□□□ 0.26
HERPUD1-210ENST00000565966 CHGBP05060 677 aa16.69■□□□□ 0.26
HERPUD1-210ENST00000565966 HLA-DOAP06340 250 aa16.69■□□□□ 0.26
HERPUD1-210ENST00000565966 PLEKHM2Q8IWE5 1019 aa16.69■□□□□ 0.26
HERPUD1-210ENST00000565966 CFHR5Q9BXR6 569 aa16.69■□□□□ 0.26
HERPUD1-210ENST00000565966 CRNKL1Q9BZJ0 848 aaKnown RBP16.69■□□□□ 0.26
HERPUD1-210ENST00000565966 PICK1Q9NRD5 415 aa16.69■□□□□ 0.26
HERPUD1-210ENST00000565966 CCL15-CCL14A0A0B4J2E2 113 aa16.68■□□□□ 0.26
HERPUD1-210ENST00000565966 FAM196BA6NMK8 535 aa16.68■□□□□ 0.26
HERPUD1-210ENST00000565966 IGF2BP3O00425 579 aaKnown RBP eCLIP16.68■□□□□ 0.26
HERPUD1-210ENST00000565966 TBC1D8O95759 1140 aa16.68■□□□□ 0.26
HERPUD1-210ENST00000565966 CETPP11597 493 aa16.68■□□□□ 0.26
HERPUD1-210ENST00000565966 SNAPC2Q13487 334 aa16.68■□□□□ 0.26
HERPUD1-210ENST00000565966 CCL15Q16663 113 aa16.68■□□□□ 0.26
HERPUD1-210ENST00000565966 METTL16Q86W50 562 aaKnown RBP16.68■□□□□ 0.26
HERPUD1-210ENST00000565966 PTPN18Q99952 460 aa16.68■□□□□ 0.26
HERPUD1-210ENST00000565966 SAP30BPQ9UHR5 308 aaKnown RBP16.68■□□□□ 0.26
HERPUD1-210ENST00000565966 MYH8P13535 1937 aa16.67■□□□□ 0.26
HERPUD1-210ENST00000565966 NEFLP07196 543 aa16.67■□□□□ 0.26
HERPUD1-210ENST00000565966 PTPRAP18433 802 aa16.67■□□□□ 0.26
HERPUD1-210ENST00000565966 TTC6Q86TZ1 520 aa16.67■□□□□ 0.26
HERPUD1-210ENST00000565966 TNS4Q8IZW8 715 aa16.67■□□□□ 0.26
HERPUD1-210ENST00000565966 LCORLQ8N3X6 602 aa16.67■□□□□ 0.26
HERPUD1-210ENST00000565966 CRACR2BQ8N4Y2 399 aaPredicted RBP16.67■□□□□ 0.26
HERPUD1-210ENST00000565966 BRI3BPQ8WY22 251 aa16.67■□□□□ 0.26
HERPUD1-210ENST00000565966 TRIM34Q9BYJ4 488 aa16.67■□□□□ 0.26
HERPUD1-210ENST00000565966 OSBPL3Q9H4L5 887 aa16.67■□□□□ 0.26
HERPUD1-210ENST00000565966 KCNH4Q9UQ05 1017 aa16.67■□□□□ 0.26
HERPUD1-210ENST00000565966 CXCL11O14625 94 aa16.66■□□□□ 0.26
HERPUD1-210ENST00000565966 PDE4AP27815 886 aa16.66■□□□□ 0.26
HERPUD1-210ENST00000565966 CAP2P40123 477 aa16.66■□□□□ 0.26
HERPUD1-210ENST00000565966 LRRFIP1Q32MZ4 808 aaKnown RBP16.66■□□□□ 0.26
HERPUD1-210ENST00000565966 NOM1Q5C9Z4 860 aaKnown RBP16.66■□□□□ 0.26
HERPUD1-210ENST00000565966 ARMT1Q9H993 441 aa16.66■□□□□ 0.26
HERPUD1-210ENST00000565966 ZHX2Q9Y6X8 837 aa16.66■□□□□ 0.26
HERPUD1-210ENST00000565966 DDX60LQ5H9U9 1706 aaKnown RBP16.65■□□□□ 0.26
HERPUD1-210ENST00000565966 GPR25O00155 361 aa16.65■□□□□ 0.26
HERPUD1-210ENST00000565966 RNF113AO15541 343 aaKnown RBP16.65■□□□□ 0.26
HERPUD1-210ENST00000565966 MBD4O95243 580 aa16.65■□□□□ 0.26
HERPUD1-210ENST00000565966 ZFYP08048 801 aaPredicted RBP16.65■□□□□ 0.26
HERPUD1-210ENST00000565966 SDR42E1Q8WUS8 393 aa16.65■□□□□ 0.26
HERPUD1-210ENST00000565966 PUS7LQ9H0K6 701 aaKnown RBP16.65■□□□□ 0.26
HERPUD1-210ENST00000565966 AFG3L2Q9Y4W6 797 aa16.65■□□□□ 0.26
HERPUD1-210ENST00000565966 POLR3DP05423 398 aaPredicted RBP16.64■□□□□ 0.25
HERPUD1-210ENST00000565966 SLC4A8Q2Y0W8 1093 aa16.64■□□□□ 0.25
HERPUD1-210ENST00000565966 EVI5LQ96CN4 794 aa16.64■□□□□ 0.25
HERPUD1-210ENST00000565966 FSD1Q9BTV5 496 aa16.64■□□□□ 0.25
HERPUD1-210ENST00000565966 EHD4Q9H223 541 aa16.64■□□□□ 0.25
HERPUD1-210ENST00000565966 R3HDMLQ9H3Y0 253 aa16.64■□□□□ 0.25
HERPUD1-210ENST00000565966 DNAJC18Q9H819 358 aa16.64■□□□□ 0.25
HERPUD1-210ENST00000565966 ZCCHC17Q9NP64 241 aaKnown RBP16.64■□□□□ 0.25
HERPUD1-210ENST00000565966 DCP1AQ9NPI6 582 aaPredicted RBP16.64■□□□□ 0.25
HERPUD1-210ENST00000565966 ATP8A2Q9NTI2 1148 aa16.64■□□□□ 0.25
HERPUD1-210ENST00000565966 MCM9Q9NXL9 1143 aa16.64■□□□□ 0.25
HERPUD1-210ENST00000565966 SERPINB13Q9UIV8 391 aa16.64■□□□□ 0.25
HERPUD1-210ENST00000565966 BTBD19C9JJ37 291 aa16.63■□□□□ 0.25
HERPUD1-210ENST00000565966 PLCD1P51178 756 aa16.63■□□□□ 0.25
HERPUD1-210ENST00000565966 RRP1BQ14684 758 aaKnown RBP16.63■□□□□ 0.25
HERPUD1-210ENST00000565966 FAM43AQ8N2R8 423 aa16.63■□□□□ 0.25
HERPUD1-210ENST00000565966 ZNF296Q8WUU4 475 aaPredicted RBP16.63■□□□□ 0.25
HERPUD1-210ENST00000565966 APPBP2Q92624 585 aa16.63■□□□□ 0.25
HERPUD1-210ENST00000565966 OSBP2Q969R2 916 aa16.63■□□□□ 0.25
HERPUD1-210ENST00000565966 TBC1D2Q9BYX2 928 aa16.63■□□□□ 0.25
HERPUD1-210ENST00000565966 GINM1Q9NU53 330 aa16.63■□□□□ 0.25
HERPUD1-210ENST00000565966 PRKAB2O43741 272 aa16.62■□□□□ 0.25
HERPUD1-210ENST00000565966 ASNSP08243 561 aa16.62■□□□□ 0.25
HERPUD1-210ENST00000565966 CRHR2Q13324 411 aa16.62■□□□□ 0.25
HERPUD1-210ENST00000565966 TAF1CQ15572 869 aaPredicted RBP16.62■□□□□ 0.25
HERPUD1-210ENST00000565966 CENPQQ7L2Z9 268 aaPredicted RBP16.62■□□□□ 0.25
HERPUD1-210ENST00000565966 DDRGK1Q96HY6 314 aa16.62■□□□□ 0.25
HERPUD1-210ENST00000565966 ZFYVE28Q9HCC9 887 aa16.62■□□□□ 0.25
HERPUD1-210ENST00000565966 SLC4A4Q9Y6R1 1079 aa16.62■□□□□ 0.25
HERPUD1-210ENST00000565966 A0A0G2JLL6 359 aaPredicted RBP16.61■□□□□ 0.25
HERPUD1-210ENST00000565966 USP17L5A8MUK1 530 aa16.61■□□□□ 0.25
HERPUD1-210ENST00000565966 FKTNO75072 461 aa16.61■□□□□ 0.25
HERPUD1-210ENST00000565966 TATDN1Q6P1N9 297 aa16.61■□□□□ 0.25
HERPUD1-210ENST00000565966 FASTKD5Q7L8L6 764 aaKnown RBP16.61■□□□□ 0.25
HERPUD1-210ENST00000565966 PRRT2Q7Z6L0 340 aaPredicted RBP16.61■□□□□ 0.25
HERPUD1-210ENST00000565966 ANKRD23Q86SG2 305 aa16.61■□□□□ 0.25
HERPUD1-210ENST00000565966 STRBPQ96SI9 672 aaKnown RBP16.61■□□□□ 0.25
HERPUD1-210ENST00000565966 AS3MTQ9HBK9 375 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms