RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 SHTN1A0MZ66 631 aa22.11■■□□□ 1.13
COMMD4-213ENST00000565834 ORC4O43929 436 aa22.11■■□□□ 1.13
COMMD4-213ENST00000565834 HSP90AA1P07900 732 aaKnown RBP22.11■■□□□ 1.13
COMMD4-213ENST00000565834 TTC6Q86TZ1 520 aa22.11■■□□□ 1.13
COMMD4-213ENST00000565834 ZBED3Q96IU2 234 aaPredicted RBP22.11■■□□□ 1.13
COMMD4-213ENST00000565834 FAM198AQ9UFP1 575 aa22.11■■□□□ 1.13
COMMD4-213ENST00000565834 CNOT7Q9UIV1 285 aaKnown RBP22.11■■□□□ 1.13
COMMD4-213ENST00000565834 MYO1BO43795 1136 aa22.11■■□□□ 1.13
COMMD4-213ENST00000565834 SPDYE2Q495Y8 402 aa22.11■■□□□ 1.13
COMMD4-213ENST00000565834 NKX2-3Q8TAU0 364 aa22.11■■□□□ 1.13
COMMD4-213ENST00000565834 BRF1Q92994 677 aa22.11■■□□□ 1.13
COMMD4-213ENST00000565834 DYNLL2Q96FJ2 89 aa22.11■■□□□ 1.13
COMMD4-213ENST00000565834 ZSCAN31Q96LW9 406 aaPredicted RBP22.11■■□□□ 1.13
COMMD4-213ENST00000565834 AGXT2Q9BYV1 514 aa22.11■■□□□ 1.13
COMMD4-213ENST00000565834 ZSWIM5Q9P217 1185 aa22.11■■□□□ 1.13
COMMD4-213ENST00000565834 ZNF70Q9UC06 446 aaPredicted RBP22.11■■□□□ 1.13
COMMD4-213ENST00000565834 MYH8P13535 1937 aa22.1■■□□□ 1.13
COMMD4-213ENST00000565834 PRDM1O75626 825 aa22.1■■□□□ 1.13
COMMD4-213ENST00000565834 TCP10Q12799 353 aa22.1■■□□□ 1.13
COMMD4-213ENST00000565834 FBXL16Q8N461 479 aa22.1■■□□□ 1.13
COMMD4-213ENST00000565834 SPRYD3Q8NCJ5 442 aa22.1■■□□□ 1.13
COMMD4-213ENST00000565834 CLRN2A0PK11 232 aa22.09■■□□□ 1.13
COMMD4-213ENST00000565834 RANBP6O60518 1105 aaKnown RBP22.09■■□□□ 1.13
COMMD4-213ENST00000565834 ENTPD3O75355 529 aa22.09■■□□□ 1.13
COMMD4-213ENST00000565834 HLA-DOAP06340 250 aa22.09■■□□□ 1.13
COMMD4-213ENST00000565834 TMEM87BQ96K49 555 aa22.09■■□□□ 1.13
COMMD4-213ENST00000565834 ZNF287Q9HBT7 754 aa22.09■■□□□ 1.13
COMMD4-213ENST00000565834 SH2B1Q9NRF2 756 aaPredicted RBP22.09■■□□□ 1.13
COMMD4-213ENST00000565834 TPCN1Q9ULQ1 816 aa22.09■■□□□ 1.13
COMMD4-213ENST00000565834 WNT10BO00744 389 aa22.08■■□□□ 1.13
COMMD4-213ENST00000565834 NT5C2P49902 561 aa22.08■■□□□ 1.13
COMMD4-213ENST00000565834 C16orf86Q6ZW13 317 aa22.08■■□□□ 1.13
COMMD4-213ENST00000565834 DHX36Q9H2U1 1008 aaKnown RBP22.08■■□□□ 1.13
COMMD4-213ENST00000565834 H7C1D1 291 aa22.07■■□□□ 1.12
COMMD4-213ENST00000565834 SART3Q15020 963 aaKnown RBP22.07■■□□□ 1.12
COMMD4-213ENST00000565834 RBM26Q5T8P6 1007 aaKnown RBP22.07■■□□□ 1.12
COMMD4-213ENST00000565834 ZFPM1Q8IX07 1006 aa22.07■■□□□ 1.12
COMMD4-213ENST00000565834 MKNK2Q9HBH9 465 aa22.07■■□□□ 1.12
COMMD4-213ENST00000565834 COL2A1P02458 1487 aaPredicted RBP22.07■■□□□ 1.12
COMMD4-213ENST00000565834 LARGE1O95461 756 aa22.07■■□□□ 1.12
COMMD4-213ENST00000565834 NBPF9Q3BBW0 867 aa22.07■■□□□ 1.12
COMMD4-213ENST00000565834 MTA3Q9BTC8 594 aa22.07■■□□□ 1.12
COMMD4-213ENST00000565834 VEZTQ9HBM0 779 aa22.07■■□□□ 1.12
COMMD4-213ENST00000565834 GPHNQ9NQX3 736 aaPredicted RBP22.07■■□□□ 1.12
COMMD4-213ENST00000565834 GPRC5DQ9NZD1 345 aa22.07■■□□□ 1.12
COMMD4-213ENST00000565834 ANGEL1Q9UNK9 670 aaKnown RBP22.07■■□□□ 1.12
COMMD4-213ENST00000565834 SIPA1L1O43166 1804 aa22.06■■□□□ 1.12
COMMD4-213ENST00000565834 TCP10L2B9ZVM9 353 aa22.06■■□□□ 1.12
COMMD4-213ENST00000565834 SH2B2O14492 632 aaPredicted RBP22.06■■□□□ 1.12
COMMD4-213ENST00000565834 IFIT3O14879 490 aaKnown RBP22.06■■□□□ 1.12
COMMD4-213ENST00000565834 CDK8P49336 464 aa22.06■■□□□ 1.12
COMMD4-213ENST00000565834 APOBRQ0VD83 1088 aa22.06■■□□□ 1.12
COMMD4-213ENST00000565834 CUL4AQ13619 759 aa22.06■■□□□ 1.12
COMMD4-213ENST00000565834 ME3Q16798 604 aa22.06■■□□□ 1.12
COMMD4-213ENST00000565834 TMEM67Q5HYA8 995 aa22.06■■□□□ 1.12
COMMD4-213ENST00000565834 FKBP1CQ5VVH2 108 aa22.06■■□□□ 1.12
COMMD4-213ENST00000565834 SAMD7Q7Z3H4 446 aa22.06■■□□□ 1.12
COMMD4-213ENST00000565834 ZSCAN29Q8IWY8 852 aaPredicted RBP22.06■■□□□ 1.12
COMMD4-213ENST00000565834 SLC44A5Q8NCS7 719 aa22.06■■□□□ 1.12
COMMD4-213ENST00000565834 UBAC1Q9BSL1 405 aa22.06■■□□□ 1.12
COMMD4-213ENST00000565834 SERPINB13Q9UIV8 391 aa22.06■■□□□ 1.12
COMMD4-213ENST00000565834 ERICH2A1L162 156 aa22.05■■□□□ 1.12
COMMD4-213ENST00000565834 EGFRP00533 1210 aa22.05■■□□□ 1.12
COMMD4-213ENST00000565834 KIF4BQ2VIQ3 1234 aa22.05■■□□□ 1.12
COMMD4-213ENST00000565834 TBC1D10BQ4KMP7 808 aaPredicted RBP22.05■■□□□ 1.12
COMMD4-213ENST00000565834 IGDCC4Q8TDY8 1250 aa22.05■■□□□ 1.12
COMMD4-213ENST00000565834 EHD4Q9H223 541 aa22.05■■□□□ 1.12
COMMD4-213ENST00000565834 FOXD4L1Q9NU39 408 aa22.05■■□□□ 1.12
COMMD4-213ENST00000565834 ATRNL1Q5VV63 1379 aa22.05■■□□□ 1.12
COMMD4-213ENST00000565834 DDTLA6NHG4 134 aaPredicted RBP22.04■■□□□ 1.12
COMMD4-213ENST00000565834 TSPY2A6NKD2 308 aa22.04■■□□□ 1.12
COMMD4-213ENST00000565834 DDNO94850 711 aaPredicted RBP22.04■■□□□ 1.12
COMMD4-213ENST00000565834 IQCA1Q86XH1 822 aa22.04■■□□□ 1.12
COMMD4-213ENST00000565834 ZNF444Q8N0Y2 327 aaPredicted RBP22.04■■□□□ 1.12
COMMD4-213ENST00000565834 ZKSCAN3Q9BRR0 538 aa22.04■■□□□ 1.12
COMMD4-213ENST00000565834 GABPAQ06546 454 aa22.04■■□□□ 1.12
COMMD4-213ENST00000565834 FAM47AQ5JRC9 791 aa22.04■■□□□ 1.12
COMMD4-213ENST00000565834 SH3BP5LQ7L8J4 393 aa22.04■■□□□ 1.12
COMMD4-213ENST00000565834 FAM151AQ8WW52 585 aa22.04■■□□□ 1.12
COMMD4-213ENST00000565834 SLKQ9H2G2 1235 aaPredicted RBP22.04■■□□□ 1.12
COMMD4-213ENST00000565834 LY9Q9HBG7 655 aa22.04■■□□□ 1.12
COMMD4-213ENST00000565834 PI4KBQ9UBF8 816 aa22.04■■□□□ 1.12
COMMD4-213ENST00000565834 SWAP70Q9UH65 585 aa22.04■■□□□ 1.12
COMMD4-213ENST00000565834 ZC3H4Q9UPT8 1303 aaKnown RBP22.03■■□□□ 1.12
COMMD4-213ENST00000565834 RASA1P20936 1047 aa22.03■■□□□ 1.12
COMMD4-213ENST00000565834 LIFRP42702 1097 aa22.03■■□□□ 1.12
COMMD4-213ENST00000565834 EVCP57679 992 aa22.03■■□□□ 1.12
COMMD4-213ENST00000565834 INTS4Q96HW7 963 aaKnown RBP22.03■■□□□ 1.12
COMMD4-213ENST00000565834 ZSCAN10Q96SZ4 725 aaPredicted RBP22.03■■□□□ 1.12
COMMD4-213ENST00000565834 NAP1L2Q9ULW6 460 aaPredicted RBP22.03■■□□□ 1.12
COMMD4-213ENST00000565834 TNKSO95271 1327 aa22.03■■□□□ 1.12
COMMD4-213ENST00000565834 CNTNAP1P78357 1384 aa22.02■■□□□ 1.12
COMMD4-213ENST00000565834 KLF18A0A0U1RQI7 1052 aa22.02■■□□□ 1.12
COMMD4-213ENST00000565834 LMOD1P29536 600 aaPredicted RBP22.02■■□□□ 1.12
COMMD4-213ENST00000565834 TFAP4Q01664 338 aa22.02■■□□□ 1.12
COMMD4-213ENST00000565834 STK3Q13188 491 aa22.02■■□□□ 1.12
COMMD4-213ENST00000565834 WTAPQ15007 396 aa22.02■■□□□ 1.12
COMMD4-213ENST00000565834 DPY19L2Q6NUT2 758 aa22.02■■□□□ 1.12
COMMD4-213ENST00000565834 FAM83AQ86UY5 434 aa22.02■■□□□ 1.12
COMMD4-213ENST00000565834 CCDC83Q8IWF9 413 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms