RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 NAV1Q8NEY1 1877 aa22.6■■□□□ 1.21
CMTM3-210ENST00000565666 SIPA1L1O43166 1804 aa22.6■■□□□ 1.21
CMTM3-210ENST00000565666 CCL15-CCL14A0A0B4J2E2 113 aa22.6■■□□□ 1.21
CMTM3-210ENST00000565666 GLRX3O76003 335 aaKnown RBP22.6■■□□□ 1.21
CMTM3-210ENST00000565666 TBC1D8O95759 1140 aa22.6■■□□□ 1.21
CMTM3-210ENST00000565666 CCL15Q16663 113 aa22.6■■□□□ 1.21
CMTM3-210ENST00000565666 SLC4A8Q2Y0W8 1093 aa22.6■■□□□ 1.21
CMTM3-210ENST00000565666 TNS4Q8IZW8 715 aa22.6■■□□□ 1.21
CMTM3-210ENST00000565666 MS4A4AQ96JQ5 239 aa22.6■■□□□ 1.21
CMTM3-210ENST00000565666 IGF2BP3O00425 579 aaKnown RBP eCLIP22.59■■□□□ 1.21
CMTM3-210ENST00000565666 IRF6O14896 467 aa22.59■■□□□ 1.21
CMTM3-210ENST00000565666 CTNND1O60716 968 aaKnown RBP22.59■■□□□ 1.21
CMTM3-210ENST00000565666 IGHDP01880 384 aa22.59■■□□□ 1.21
CMTM3-210ENST00000565666 SNAPC2Q13487 334 aa22.59■■□□□ 1.21
CMTM3-210ENST00000565666 UBE3CQ15386 1083 aa22.59■■□□□ 1.21
CMTM3-210ENST00000565666 SLFNL1Q499Z3 407 aa22.59■■□□□ 1.21
CMTM3-210ENST00000565666 B4GALNT3Q6L9W6 998 aa22.59■■□□□ 1.21
CMTM3-210ENST00000565666 SMC5Q8IY18 1101 aa22.59■■□□□ 1.21
CMTM3-210ENST00000565666 KBTBD3Q8NAB2 608 aa22.59■■□□□ 1.21
CMTM3-210ENST00000565666 TESPA1A2RU30 521 aaPredicted RBP22.58■■□□□ 1.21
CMTM3-210ENST00000565666 MBD4O95243 580 aa22.58■■□□□ 1.21
CMTM3-210ENST00000565666 CETPP11597 493 aa22.58■■□□□ 1.21
CMTM3-210ENST00000565666 LCORLQ8N3X6 602 aa22.58■■□□□ 1.21
CMTM3-210ENST00000565666 PI4K2BQ8TCG2 481 aa22.58■■□□□ 1.21
CMTM3-210ENST00000565666 ARMT1Q9H993 441 aa22.58■■□□□ 1.21
CMTM3-210ENST00000565666 ATAD5Q96QE3 1844 aa22.57■■□□□ 1.2
CMTM3-210ENST00000565666 FOXP4Q8IVH2 680 aaPredicted RBP22.57■■□□□ 1.2
CMTM3-210ENST00000565666 BRI3BPQ8WY22 251 aa22.57■■□□□ 1.2
CMTM3-210ENST00000565666 LNPKQ9C0E8 428 aa22.57■■□□□ 1.2
CMTM3-210ENST00000565666 CASP8AP2Q9UKL3 1982 aa22.57■■□□□ 1.2
CMTM3-210ENST00000565666 CHGBP05060 677 aa22.56■■□□□ 1.2
CMTM3-210ENST00000565666 TTC6Q86TZ1 520 aa22.56■■□□□ 1.2
CMTM3-210ENST00000565666 PTPN18Q99952 460 aa22.56■■□□□ 1.2
CMTM3-210ENST00000565666 ZHX2Q9Y6X8 837 aa22.56■■□□□ 1.2
CMTM3-210ENST00000565666 SALL3Q9BXA9 1300 aa22.56■■□□□ 1.2
CMTM3-210ENST00000565666 DDX60LQ5H9U9 1706 aaKnown RBP22.55■■□□□ 1.2
CMTM3-210ENST00000565666 POLR3DP05423 398 aaPredicted RBP22.55■■□□□ 1.2
CMTM3-210ENST00000565666 PTPRAP18433 802 aa22.55■■□□□ 1.2
CMTM3-210ENST00000565666 LRRFIP1Q32MZ4 808 aaKnown RBP22.55■■□□□ 1.2
CMTM3-210ENST00000565666 SDR42E1Q8WUS8 393 aa22.55■■□□□ 1.2
CMTM3-210ENST00000565666 CAP2P40123 477 aa22.54■■□□□ 1.2
CMTM3-210ENST00000565666 FSD1Q9BTV5 496 aa22.54■■□□□ 1.2
CMTM3-210ENST00000565666 CFHR5Q9BXR6 569 aa22.54■■□□□ 1.2
CMTM3-210ENST00000565666 MCM9Q9NXL9 1143 aa22.54■■□□□ 1.2
CMTM3-210ENST00000565666 KCNH4Q9UQ05 1017 aa22.54■■□□□ 1.2
CMTM3-210ENST00000565666 RNF113AO15541 343 aaKnown RBP22.53■■□□□ 1.2
CMTM3-210ENST00000565666 ZFYP08048 801 aaPredicted RBP22.53■■□□□ 1.2
CMTM3-210ENST00000565666 PDE1AP54750 535 aa22.53■■□□□ 1.2
CMTM3-210ENST00000565666 CHD1LQ86WJ1 897 aa22.53■■□□□ 1.2
CMTM3-210ENST00000565666 PUS7LQ9H0K6 701 aaKnown RBP22.53■■□□□ 1.2
CMTM3-210ENST00000565666 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.53■■□□□ 1.2
CMTM3-210ENST00000565666 STAP2Q9UGK3 403 aa22.53■■□□□ 1.2
CMTM3-210ENST00000565666 GPR25O00155 361 aa22.52■■□□□ 1.2
CMTM3-210ENST00000565666 CXCL11O14625 94 aa22.52■■□□□ 1.2
CMTM3-210ENST00000565666 NUCB1Q02818 461 aa22.52■■□□□ 1.2
CMTM3-210ENST00000565666 TAF1CQ15572 869 aaPredicted RBP22.52■■□□□ 1.2
CMTM3-210ENST00000565666 CCDC84Q86UT8 332 aaPredicted RBP22.52■■□□□ 1.2
CMTM3-210ENST00000565666 METTL16Q86W50 562 aaKnown RBP22.52■■□□□ 1.2
CMTM3-210ENST00000565666 FAM43AQ8N2R8 423 aa22.52■■□□□ 1.2
CMTM3-210ENST00000565666 APPBP2Q92624 585 aa22.52■■□□□ 1.2
CMTM3-210ENST00000565666 DDRGK1Q96HY6 314 aa22.52■■□□□ 1.2
CMTM3-210ENST00000565666 DNAJC18Q9H819 358 aa22.52■■□□□ 1.2
CMTM3-210ENST00000565666 DCP1AQ9NPI6 582 aaPredicted RBP22.52■■□□□ 1.2
CMTM3-210ENST00000565666 SERPINB13Q9UIV8 391 aa22.52■■□□□ 1.2
CMTM3-210ENST00000565666 PHIPQ8WWQ0 1821 aa22.52■■□□□ 1.2
CMTM3-210ENST00000565666 PRKAB2O43741 272 aa22.51■■□□□ 1.19
CMTM3-210ENST00000565666 CRHR2Q13324 411 aa22.51■■□□□ 1.19
CMTM3-210ENST00000565666 RRP1BQ14684 758 aaKnown RBP22.51■■□□□ 1.19
CMTM3-210ENST00000565666 ZNF296Q8WUU4 475 aaPredicted RBP22.51■■□□□ 1.19
CMTM3-210ENST00000565666 EHD4Q9H223 541 aa22.51■■□□□ 1.19
CMTM3-210ENST00000565666 R3HDMLQ9H3Y0 253 aa22.51■■□□□ 1.19
CMTM3-210ENST00000565666 ATP8A2Q9NTI2 1148 aa22.51■■□□□ 1.19
CMTM3-210ENST00000565666 AFG3L2Q9Y4W6 797 aa22.51■■□□□ 1.19
CMTM3-210ENST00000565666 SLC4A4Q9Y6R1 1079 aa22.51■■□□□ 1.19
CMTM3-210ENST00000565666 BTBD19C9JJ37 291 aa22.5■■□□□ 1.19
CMTM3-210ENST00000565666 AMOTL1Q8IY63 956 aa22.5■■□□□ 1.19
CMTM3-210ENST00000565666 ZFYVE28Q9HCC9 887 aa22.5■■□□□ 1.19
CMTM3-210ENST00000565666 BAZ2AQ9UIF9 1905 aaKnown RBP22.49■■□□□ 1.19
CMTM3-210ENST00000565666 TRIM75PA6NK02 468 aa22.49■■□□□ 1.19
CMTM3-210ENST00000565666 USP17L5A8MUK1 530 aa22.49■■□□□ 1.19
CMTM3-210ENST00000565666 FKTNO75072 461 aa22.49■■□□□ 1.19
CMTM3-210ENST00000565666 GDF11O95390 407 aa22.49■■□□□ 1.19
CMTM3-210ENST00000565666 ASNSP08243 561 aa22.49■■□□□ 1.19
CMTM3-210ENST00000565666 PLCD1P51178 756 aa22.49■■□□□ 1.19
CMTM3-210ENST00000565666 NOM1Q5C9Z4 860 aaKnown RBP22.49■■□□□ 1.19
CMTM3-210ENST00000565666 TBC1D2Q9BYX2 928 aa22.49■■□□□ 1.19
CMTM3-210ENST00000565666 AS3MTQ9HBK9 375 aa22.49■■□□□ 1.19
CMTM3-210ENST00000565666 ZCCHC17Q9NP64 241 aaKnown RBP22.49■■□□□ 1.19
CMTM3-210ENST00000565666 GADL1Q6ZQY3 521 aa22.48■■□□□ 1.19
CMTM3-210ENST00000565666 FASTKD5Q7L8L6 764 aaKnown RBP22.48■■□□□ 1.19
CMTM3-210ENST00000565666 ANKRD23Q86SG2 305 aa22.48■■□□□ 1.19
CMTM3-210ENST00000565666 OSBP2Q969R2 916 aa22.48■■□□□ 1.19
CMTM3-210ENST00000565666 EVI5LQ96CN4 794 aa22.48■■□□□ 1.19
CMTM3-210ENST00000565666 PTPRFP10586 1907 aa22.47■■□□□ 1.19
CMTM3-210ENST00000565666 A0A0G2JLL6 359 aaPredicted RBP22.47■■□□□ 1.19
CMTM3-210ENST00000565666 DGKZQ13574 1117 aa22.47■■□□□ 1.19
CMTM3-210ENST00000565666 PRRT2Q7Z6L0 340 aaPredicted RBP22.47■■□□□ 1.19
CMTM3-210ENST00000565666 STRBPQ96SI9 672 aaKnown RBP22.47■■□□□ 1.19
CMTM3-210ENST00000565666 GINM1Q9NU53 330 aa22.47■■□□□ 1.19
CMTM3-210ENST00000565666 TRIM6-TRIM34B2RNG4 842 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms