RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 USP17L12C9JPN9 530 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 USP17L21D6R901 530 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 RHBDL3P58872 404 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 FGD1P98174 961 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 CIAPIN1Q6FI81 312 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 TBC1D10CQ8IV04 446 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 FBXL16Q8N461 479 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 OGFOD1Q8N543 542 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 TGFBRAP1Q8WUH2 860 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 MCM9Q9NXL9 1143 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 MKRN1Q9UHC7 482 aaKnown RBP11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 R3HCC1Q9Y3T6 440 aaKnown RBP11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 ECM29Q5VYK3 1845 aa11.04□□□□□ -0.64
CNEP1R1-206ENST00000565556 RBM5P52756 815 aaKnown RBP eCLIP11.03□□□□□ -0.64
CNEP1R1-206ENST00000565556 CTDSPL2Q05D32 466 aa11.03□□□□□ -0.64
CNEP1R1-206ENST00000565556 CXCL9Q07325 125 aa11.03□□□□□ -0.64
CNEP1R1-206ENST00000565556 APOBEC3HQ6NTF7 200 aaKnown RBP11.03□□□□□ -0.64
CNEP1R1-206ENST00000565556 MB21D2Q8IYB1 491 aaPredicted RBP11.03□□□□□ -0.64
CNEP1R1-206ENST00000565556 PKNOX2Q96KN3 472 aa11.03□□□□□ -0.64
CNEP1R1-206ENST00000565556 GMLQ99445 158 aa11.03□□□□□ -0.64
CNEP1R1-206ENST00000565556 SH2B1Q9NRF2 756 aaPredicted RBP11.03□□□□□ -0.64
CNEP1R1-206ENST00000565556 USP40Q9NVE5 1235 aa11.03□□□□□ -0.64
CNEP1R1-206ENST00000565556 MYH1P12882 1939 aa11.02□□□□□ -0.64
CNEP1R1-206ENST00000565556 RPS12P25398 132 aaKnown RBP11.02□□□□□ -0.65
CNEP1R1-206ENST00000565556 EIF6P56537 245 aaKnown RBP11.02□□□□□ -0.65
CNEP1R1-206ENST00000565556 RASSF7Q02833 373 aa11.02□□□□□ -0.65
CNEP1R1-206ENST00000565556 Q6ZUG5 572 aa11.02□□□□□ -0.65
CNEP1R1-206ENST00000565556 ARHGAP27Q6ZUM4 889 aa11.02□□□□□ -0.65
CNEP1R1-206ENST00000565556 MTERF4Q7Z6M4 381 aaKnown RBP11.02□□□□□ -0.65
CNEP1R1-206ENST00000565556 MTA3Q9BTC8 594 aa11.02□□□□□ -0.65
CNEP1R1-206ENST00000565556 DICER1Q9UPY3 1922 aaKnown RBP11.02□□□□□ -0.65
CNEP1R1-206ENST00000565556 WDR33Q9C0J8 1336 aaKnown RBP11.02□□□□□ -0.65
CNEP1R1-206ENST00000565556 PRC1O43663 620 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 POLR3DP05423 398 aaPredicted RBP11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 FGRP09769 529 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 USP17L8P0C7I0 530 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 LMNB1P20700 586 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 PDE4BQ07343 736 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 TOB2Q14106 344 aaPredicted RBP11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 C12orf60Q5U649 245 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 CDC42EP5Q6NZY7 148 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 SASS6Q6UVJ0 657 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 NOL8Q76FK4 1167 aaKnown RBP11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 MAPKAPK5Q8IW41 473 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 FAM184AQ8NB25 1140 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 ESR2Q92731 530 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 CHMP4CQ96CF2 233 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 TMEM87BQ96K49 555 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 AGXT2Q9BYV1 514 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 ZNF287Q9HBT7 754 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 FLT1P17948 1338 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 ADAMTSL1Q8N6G6 1762 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 UQCRHLA0A096LP55 91 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 B4E1Z4 1266 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 FZD9O00144 591 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 DYNC1I1O14576 645 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 PTMAP06454 111 aaKnown RBP11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 UQCRHP07919 91 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 SART3Q15020 963 aaKnown RBP11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 CFAP100Q494V2 611 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 FOXD4L5Q5VV16 416 aaPredicted RBP11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 FOXD4L4Q8WXT5 416 aaPredicted RBP11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 TCEANC2Q96MN5 208 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 TOMM22Q9NS69 142 aa11.01□□□□□ -0.65
CNEP1R1-206ENST00000565556 NEDD4P46934 1319 aa11□□□□□ -0.65
CNEP1R1-206ENST00000565556 DDX60LQ5H9U9 1706 aaKnown RBP11□□□□□ -0.65
CNEP1R1-206ENST00000565556 ROBO3Q96MS0 1386 aa11□□□□□ -0.65
CNEP1R1-206ENST00000565556 CYP2D7A0A087X1C5 515 aa11□□□□□ -0.65
CNEP1R1-206ENST00000565556 ORC4O43929 436 aa11□□□□□ -0.65
CNEP1R1-206ENST00000565556 KDM4AO75164 1064 aa11□□□□□ -0.65
CNEP1R1-206ENST00000565556 WDHD1O75717 1129 aaPredicted RBP11□□□□□ -0.65
CNEP1R1-206ENST00000565556 COL9A3Q14050 684 aaPredicted RBP11□□□□□ -0.65
CNEP1R1-206ENST00000565556 DLGAP5Q15398 846 aa11□□□□□ -0.65
CNEP1R1-206ENST00000565556 TTC6Q86TZ1 520 aa11□□□□□ -0.65
CNEP1R1-206ENST00000565556 MTMR14Q8NCE2 650 aa11□□□□□ -0.65
CNEP1R1-206ENST00000565556 IDI2Q9BXS1 227 aa11□□□□□ -0.65
CNEP1R1-206ENST00000565556 ZMYND15Q9H091 742 aa11□□□□□ -0.65
CNEP1R1-206ENST00000565556 TAOK2Q9UL54 1235 aa11□□□□□ -0.65
CNEP1R1-206ENST00000565556 SBF1O95248 1867 aa11□□□□□ -0.65
CNEP1R1-206ENST00000565556 EVCP57679 992 aa10.99□□□□□ -0.65
CNEP1R1-206ENST00000565556 ANTXR2P58335 489 aa10.99□□□□□ -0.65
CNEP1R1-206ENST00000565556 UVSSAQ2YD98 709 aa10.99□□□□□ -0.65
CNEP1R1-206ENST00000565556 RRP12Q5JTH9 1297 aaKnown RBP10.99□□□□□ -0.65
CNEP1R1-206ENST00000565556 CYB5R4Q7L1T6 521 aa10.99□□□□□ -0.65
CNEP1R1-206ENST00000565556 TMTC2Q8N394 836 aa10.99□□□□□ -0.65
CNEP1R1-206ENST00000565556 TMEM87AQ8NBN3 555 aa10.99□□□□□ -0.65
CNEP1R1-206ENST00000565556 DPF2Q92785 391 aa10.99□□□□□ -0.65
CNEP1R1-206ENST00000565556 BRF1Q92994 677 aa10.99□□□□□ -0.65
CNEP1R1-206ENST00000565556 ZNF274Q96GC6 653 aaPredicted RBP10.99□□□□□ -0.65
CNEP1R1-206ENST00000565556 TMOD2Q9NZR1 351 aa10.99□□□□□ -0.65
CNEP1R1-206ENST00000565556 ZSWIM5Q9P217 1185 aa10.99□□□□□ -0.65
CNEP1R1-206ENST00000565556 SAP30BPQ9UHR5 308 aaKnown RBP10.99□□□□□ -0.65
CNEP1R1-206ENST00000565556 TPCN1Q9ULQ1 816 aa10.99□□□□□ -0.65
CNEP1R1-206ENST00000565556 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.99□□□□□ -0.65
CNEP1R1-206ENST00000565556 ZBTB12Q9Y330 459 aaPredicted RBP10.99□□□□□ -0.65
CNEP1R1-206ENST00000565556 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.99□□□□□ -0.65
CNEP1R1-206ENST00000565556 ERICH2A1L162 156 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 SPDYE2BA6NHP3 402 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 MYCNP04198 464 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms