RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 STOX1Q6ZVD7 989 aa22.59■■□□□ 1.21
CSPG4P13-201ENST00000565545 MXD3Q9BW11 206 aa22.59■■□□□ 1.21
CSPG4P13-201ENST00000565545 DCP1AQ9NPI6 582 aaPredicted RBP22.59■■□□□ 1.21
CSPG4P13-201ENST00000565545 SERPINA10Q9UK55 444 aa22.59■■□□□ 1.21
CSPG4P13-201ENST00000565545 CDK5RAP2Q96SN8 1893 aa22.58■■□□□ 1.21
CSPG4P13-201ENST00000565545 F8W031 263 aaPredicted RBP22.58■■□□□ 1.21
CSPG4P13-201ENST00000565545 USP5P45974 858 aa22.58■■□□□ 1.21
CSPG4P13-201ENST00000565545 MMP14P50281 582 aa22.58■■□□□ 1.21
CSPG4P13-201ENST00000565545 HAND2P61296 217 aa22.58■■□□□ 1.21
CSPG4P13-201ENST00000565545 TRDNQ13061 729 aa22.58■■□□□ 1.21
CSPG4P13-201ENST00000565545 SBK1Q52WX2 424 aa22.58■■□□□ 1.21
CSPG4P13-201ENST00000565545 DHX32Q7L7V1 743 aaKnown RBP22.58■■□□□ 1.21
CSPG4P13-201ENST00000565545 NCOA7Q8NI08 942 aa22.58■■□□□ 1.21
CSPG4P13-201ENST00000565545 SH3RF3Q8TEJ3 882 aaPredicted RBP22.58■■□□□ 1.21
CSPG4P13-201ENST00000565545 CCDC102AQ96A19 550 aa22.58■■□□□ 1.21
CSPG4P13-201ENST00000565545 RNF41Q9H4P4 317 aaPredicted RBP22.58■■□□□ 1.21
CSPG4P13-201ENST00000565545 ARPP21Q9UBL0 812 aaPredicted RBP22.58■■□□□ 1.21
CSPG4P13-201ENST00000565545 BAZ2AQ9UIF9 1905 aaKnown RBP22.58■■□□□ 1.21
CSPG4P13-201ENST00000565545 FOCADQ5VW36 1801 aa22.57■■□□□ 1.2
CSPG4P13-201ENST00000565545 PCP11498 1178 aaKnown RBP22.57■■□□□ 1.2
CSPG4P13-201ENST00000565545 CRKP46108 304 aa22.57■■□□□ 1.2
CSPG4P13-201ENST00000565545 ZNF157P51786 506 aaPredicted RBP22.57■■□□□ 1.2
CSPG4P13-201ENST00000565545 PPARAQ07869 468 aa22.57■■□□□ 1.2
CSPG4P13-201ENST00000565545 KIF4BQ2VIQ3 1234 aa22.57■■□□□ 1.2
CSPG4P13-201ENST00000565545 SULF1Q8IWU6 871 aa22.57■■□□□ 1.2
CSPG4P13-201ENST00000565545 AGBL3Q8NEM8 1001 aa22.57■■□□□ 1.2
CSPG4P13-201ENST00000565545 ZDHHC15Q96MV8 337 aa22.57■■□□□ 1.2
CSPG4P13-201ENST00000565545 CNNM2Q9H8M5 875 aa22.57■■□□□ 1.2
CSPG4P13-201ENST00000565545 WDR19Q8NEZ3 1342 aa22.57■■□□□ 1.2
CSPG4P13-201ENST00000565545 LAMB1P07942 1786 aa22.56■■□□□ 1.2
CSPG4P13-201ENST00000565545 RHBDL3P58872 404 aa22.56■■□□□ 1.2
CSPG4P13-201ENST00000565545 KIF23Q02241 960 aaPredicted RBP22.56■■□□□ 1.2
CSPG4P13-201ENST00000565545 AKNAD1Q5T1N1 836 aa22.56■■□□□ 1.2
CSPG4P13-201ENST00000565545 RALYLQ86SE5 291 aaKnown RBP22.56■■□□□ 1.2
CSPG4P13-201ENST00000565545 KIAA0825Q8IV33 1275 aa22.56■■□□□ 1.2
CSPG4P13-201ENST00000565545 AMOTL1Q8IY63 956 aa22.56■■□□□ 1.2
CSPG4P13-201ENST00000565545 TEX11Q8IYF3 940 aa22.56■■□□□ 1.2
CSPG4P13-201ENST00000565545 NAV1Q8NEY1 1877 aa22.56■■□□□ 1.2
CSPG4P13-201ENST00000565545 SLC3A2P08195 630 aaKnown RBP22.55■■□□□ 1.2
CSPG4P13-201ENST00000565545 SLC4A3P48751 1232 aa22.55■■□□□ 1.2
CSPG4P13-201ENST00000565545 NT5C2P49902 561 aa22.55■■□□□ 1.2
CSPG4P13-201ENST00000565545 AK2P54819 239 aa22.55■■□□□ 1.2
CSPG4P13-201ENST00000565545 EXOSC10Q01780 885 aaKnown RBP22.55■■□□□ 1.2
CSPG4P13-201ENST00000565545 CTR9Q6PD62 1173 aa22.55■■□□□ 1.2
CSPG4P13-201ENST00000565545 MFSD6Q6ZSS7 791 aa22.55■■□□□ 1.2
CSPG4P13-201ENST00000565545 STAG1Q8WVM7 1258 aa22.55■■□□□ 1.2
CSPG4P13-201ENST00000565545 ZSCAN31Q96LW9 406 aaPredicted RBP22.55■■□□□ 1.2
CSPG4P13-201ENST00000565545 KRT23Q9C075 422 aa22.55■■□□□ 1.2
CSPG4P13-201ENST00000565545 NBPF3Q9H094 633 aa22.55■■□□□ 1.2
CSPG4P13-201ENST00000565545 HDAC9Q9UKV0 1011 aa22.55■■□□□ 1.2
CSPG4P13-201ENST00000565545 FAM155AB1AL88 458 aaPredicted RBP22.54■■□□□ 1.2
CSPG4P13-201ENST00000565545 CPA1P15085 419 aa22.54■■□□□ 1.2
CSPG4P13-201ENST00000565545 MCM5P33992 734 aa22.54■■□□□ 1.2
CSPG4P13-201ENST00000565545 TBC1D10CQ8IV04 446 aa22.54■■□□□ 1.2
CSPG4P13-201ENST00000565545 FBXL16Q8N461 479 aa22.54■■□□□ 1.2
CSPG4P13-201ENST00000565545 GMLQ99445 158 aa22.54■■□□□ 1.2
CSPG4P13-201ENST00000565545 GGA3Q9NZ52 723 aa22.54■■□□□ 1.2
CSPG4P13-201ENST00000565545 LIMCH1Q9UPQ0 1083 aa22.54■■□□□ 1.2
CSPG4P13-201ENST00000565545 ECM29Q5VYK3 1845 aa22.54■■□□□ 1.2
CSPG4P13-201ENST00000565545 MINDY4BA8MYZ0 360 aa22.53■■□□□ 1.2
CSPG4P13-201ENST00000565545 USP17L12C9JPN9 530 aa22.53■■□□□ 1.2
CSPG4P13-201ENST00000565545 USP17L21D6R901 530 aa22.53■■□□□ 1.2
CSPG4P13-201ENST00000565545 APOBEC3HQ6NTF7 200 aaKnown RBP22.53■■□□□ 1.2
CSPG4P13-201ENST00000565545 MB21D2Q8IYB1 491 aaPredicted RBP22.53■■□□□ 1.2
CSPG4P13-201ENST00000565545 TGFBRAP1Q8WUH2 860 aa22.53■■□□□ 1.2
CSPG4P13-201ENST00000565545 FGRP09769 529 aa22.52■■□□□ 1.2
CSPG4P13-201ENST00000565545 CTDSPL2Q05D32 466 aa22.52■■□□□ 1.2
CSPG4P13-201ENST00000565545 TMX3Q96JJ7 454 aa22.52■■□□□ 1.2
CSPG4P13-201ENST00000565545 USP40Q9NVE5 1235 aa22.52■■□□□ 1.2
CSPG4P13-201ENST00000565545 MCM9Q9NXL9 1143 aa22.52■■□□□ 1.2
CSPG4P13-201ENST00000565545 MYH1P12882 1939 aa22.51■■□□□ 1.19
CSPG4P13-201ENST00000565545 CASP8AP2Q9UKL3 1982 aa22.51■■□□□ 1.19
CSPG4P13-201ENST00000565545 TRPA1O75762 1119 aa22.51■■□□□ 1.19
CSPG4P13-201ENST00000565545 SLC34A2O95436 690 aa22.51■■□□□ 1.19
CSPG4P13-201ENST00000565545 OGFOD1Q8N543 542 aa22.51■■□□□ 1.19
CSPG4P13-201ENST00000565545 MTA3Q9BTC8 594 aa22.51■■□□□ 1.19
CSPG4P13-201ENST00000565545 AGXT2Q9BYV1 514 aa22.51■■□□□ 1.19
CSPG4P13-201ENST00000565545 SH2B1Q9NRF2 756 aaPredicted RBP22.51■■□□□ 1.19
CSPG4P13-201ENST00000565545 SAGE1Q9NXZ1 904 aa22.51■■□□□ 1.19
CSPG4P13-201ENST00000565545 ASTN2O75129 1339 aaPredicted RBP22.51■■□□□ 1.19
CSPG4P13-201ENST00000565545 NPM3O75607 178 aaKnown RBP22.5■■□□□ 1.19
CSPG4P13-201ENST00000565545 HSP90AA1P07900 732 aaKnown RBP22.5■■□□□ 1.19
CSPG4P13-201ENST00000565545 RBM5P52756 815 aaKnown RBP eCLIP22.5■■□□□ 1.19
CSPG4P13-201ENST00000565545 C12orf60Q5U649 245 aa22.5■■□□□ 1.19
CSPG4P13-201ENST00000565545 CDC42EP5Q6NZY7 148 aa22.5■■□□□ 1.19
CSPG4P13-201ENST00000565545 Q6ZUG5 572 aa22.5■■□□□ 1.19
CSPG4P13-201ENST00000565545 CDCA5Q96FF9 252 aa22.5■■□□□ 1.19
CSPG4P13-201ENST00000565545 RNF186Q9NXI6 227 aa22.5■■□□□ 1.19
CSPG4P13-201ENST00000565545 DDX60LQ5H9U9 1706 aaKnown RBP22.5■■□□□ 1.19
CSPG4P13-201ENST00000565545 USP17L8P0C7I0 530 aa22.49■■□□□ 1.19
CSPG4P13-201ENST00000565545 FGD1P98174 961 aa22.49■■□□□ 1.19
CSPG4P13-201ENST00000565545 CUL4AQ13619 759 aa22.49■■□□□ 1.19
CSPG4P13-201ENST00000565545 ANGEL2Q5VTE6 544 aaKnown RBP22.49■■□□□ 1.19
CSPG4P13-201ENST00000565545 MAPKAPK5Q8IW41 473 aa22.49■■□□□ 1.19
CSPG4P13-201ENST00000565545 FLT1P17948 1338 aa22.49■■□□□ 1.19
CSPG4P13-201ENST00000565545 ROBO3Q96MS0 1386 aa22.49■■□□□ 1.19
CSPG4P13-201ENST00000565545 PRC1O43663 620 aa22.48■■□□□ 1.19
CSPG4P13-201ENST00000565545 ORC4O43929 436 aa22.48■■□□□ 1.19
CSPG4P13-201ENST00000565545 POLR3DP05423 398 aaPredicted RBP22.48■■□□□ 1.19
CSPG4P13-201ENST00000565545 PDE4BQ07343 736 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms