RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 SH3RF3Q8TEJ3 882 aaPredicted RBP14.89□□□□□ -0.03
GTF3C1-204ENST00000564664 EAF2Q96CJ1 260 aaPredicted RBP14.89□□□□□ -0.03
GTF3C1-204ENST00000564664 TRIM47Q96LD4 638 aa14.89□□□□□ -0.03
GTF3C1-204ENST00000564664 AATFQ9NY61 560 aaKnown RBP eCLIP14.89□□□□□ -0.03
GTF3C1-204ENST00000564664 DBNLQ9UJU6 430 aaKnown RBP14.89□□□□□ -0.03
GTF3C1-204ENST00000564664 PNMA3Q9UL41 463 aa14.89□□□□□ -0.03
GTF3C1-204ENST00000564664 TRIM75PA6NK02 468 aa14.88□□□□□ -0.03
GTF3C1-204ENST00000564664 USP17L5A8MUK1 530 aa14.88□□□□□ -0.03
GTF3C1-204ENST00000564664 SLC34A2O95436 690 aa14.88□□□□□ -0.03
GTF3C1-204ENST00000564664 CAPN2P17655 700 aa14.88□□□□□ -0.03
GTF3C1-204ENST00000564664 EN2P19622 333 aaPredicted RBP14.88□□□□□ -0.03
GTF3C1-204ENST00000564664 ZAP70P43403 619 aa14.88□□□□□ -0.03
GTF3C1-204ENST00000564664 PABPC4Q13310 644 aaKnown RBP eCLIP14.88□□□□□ -0.03
GTF3C1-204ENST00000564664 SLC4A8Q2Y0W8 1093 aa14.88□□□□□ -0.03
GTF3C1-204ENST00000564664 ZNF280CQ8ND82 737 aa14.88□□□□□ -0.03
GTF3C1-204ENST00000564664 RAET1EQ8TD07 263 aa14.88□□□□□ -0.03
GTF3C1-204ENST00000564664 CCDC8Q9H0W5 538 aaPredicted RBP14.88□□□□□ -0.03
GTF3C1-204ENST00000564664 AS3MTQ9HBK9 375 aa14.88□□□□□ -0.03
GTF3C1-204ENST00000564664 AGTPBP1Q9UPW5 1226 aa14.88□□□□□ -0.03
GTF3C1-204ENST00000564664 HMMRO75330 724 aa14.87□□□□□ -0.03
GTF3C1-204ENST00000564664 CYP2C8P10632 490 aa14.87□□□□□ -0.03
GTF3C1-204ENST00000564664 OSBPP22059 807 aa14.87□□□□□ -0.03
GTF3C1-204ENST00000564664 TGFBRAP1Q8WUH2 860 aa14.87□□□□□ -0.03
GTF3C1-204ENST00000564664 GCC1Q96CN9 775 aa14.87□□□□□ -0.03
GTF3C1-204ENST00000564664 WDR18Q9BV38 432 aa14.87□□□□□ -0.03
GTF3C1-204ENST00000564664 DDX19BQ9UMR2 479 aa14.87□□□□□ -0.03
GTF3C1-204ENST00000564664 RBBP6Q7Z6E9 1792 aaKnown RBP14.86□□□□□ -0.03
GTF3C1-204ENST00000564664 ASNSP08243 561 aa14.86□□□□□ -0.03
GTF3C1-204ENST00000564664 CTGFP29279 349 aa14.86□□□□□ -0.03
GTF3C1-204ENST00000564664 GRK4P32298 578 aa14.86□□□□□ -0.03
GTF3C1-204ENST00000564664 GCLCP48506 637 aaPredicted RBP14.86□□□□□ -0.03
GTF3C1-204ENST00000564664 MAP3K12Q12852 859 aa14.86□□□□□ -0.03
GTF3C1-204ENST00000564664 SPP2Q13103 211 aa14.86□□□□□ -0.03
GTF3C1-204ENST00000564664 TTF1Q15361 905 aaPredicted RBP14.86□□□□□ -0.03
GTF3C1-204ENST00000564664 SH3D19Q5HYK7 790 aa14.86□□□□□ -0.03
GTF3C1-204ENST00000564664 NKX2-3Q8TAU0 364 aa14.86□□□□□ -0.03
GTF3C1-204ENST00000564664 PANK1Q8TE04 598 aa14.86□□□□□ -0.03
GTF3C1-204ENST00000564664 SMCR8Q8TEV9 937 aaPredicted RBP14.86□□□□□ -0.03
GTF3C1-204ENST00000564664 PIH1D3Q9NQM4 214 aaKnown RBP14.86□□□□□ -0.03
GTF3C1-204ENST00000564664 MYPNQ86TC9 1320 aa14.86□□□□□ -0.03
GTF3C1-204ENST00000564664 CENPFP49454 3210 aa14.86□□□□□ -0.03
GTF3C1-204ENST00000564664 DOCK1Q14185 1865 aa14.85□□□□□ -0.03
GTF3C1-204ENST00000564664 C19orf81C9J6K1 198 aa14.85□□□□□ -0.03
GTF3C1-204ENST00000564664 HLA-DOAP06340 250 aa14.85□□□□□ -0.03
GTF3C1-204ENST00000564664 SLURP2P0DP57 97 aa14.85□□□□□ -0.03
GTF3C1-204ENST00000564664 CYP7A1P22680 504 aa14.85□□□□□ -0.03
GTF3C1-204ENST00000564664 UBXN2AP68543 259 aa14.85□□□□□ -0.03
GTF3C1-204ENST00000564664 AACSQ86V21 672 aa14.85□□□□□ -0.03
GTF3C1-204ENST00000564664 MAPKAPK5Q8IW41 473 aa14.85□□□□□ -0.03
GTF3C1-204ENST00000564664 SLAIN1Q8ND83 568 aa14.85□□□□□ -0.03
GTF3C1-204ENST00000564664 SH3TC2Q8TF17 1288 aa14.85□□□□□ -0.03
GTF3C1-204ENST00000564664 TRIM34Q9BYJ4 488 aa14.85□□□□□ -0.03
GTF3C1-204ENST00000564664 FLT1P17948 1338 aa14.85□□□□□ -0.03
GTF3C1-204ENST00000564664 RAB11FIP3O75154 756 aa14.84□□□□□ -0.03
GTF3C1-204ENST00000564664 IDH1O75874 414 aaKnown RBP14.84□□□□□ -0.03
GTF3C1-204ENST00000564664 IRF5Q13568 498 aa14.84□□□□□ -0.03
GTF3C1-204ENST00000564664 ADGRA1Q86SQ6 560 aa14.84□□□□□ -0.03
GTF3C1-204ENST00000564664 CLASRPQ8N2M8 674 aaKnown RBP14.84□□□□□ -0.03
GTF3C1-204ENST00000564664 CRACR2BQ8N4Y2 399 aaPredicted RBP14.84□□□□□ -0.03
GTF3C1-204ENST00000564664 RHPN1Q8TCX5 695 aa14.84□□□□□ -0.03
GTF3C1-204ENST00000564664 PXYLP1Q8TE99 480 aa14.84□□□□□ -0.03
GTF3C1-204ENST00000564664 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.84□□□□□ -0.03
GTF3C1-204ENST00000564664 KIF1BPQ96EK5 621 aa14.84□□□□□ -0.03
GTF3C1-204ENST00000564664 ZBTB40Q9NUA8 1239 aa14.84□□□□□ -0.03
GTF3C1-204ENST00000564664 EXOC6BQ9Y2D4 811 aa14.84□□□□□ -0.03
GTF3C1-204ENST00000564664 PHIPQ8WWQ0 1821 aa14.83□□□□□ -0.04
GTF3C1-204ENST00000564664 FAM196BA6NMK8 535 aa14.83□□□□□ -0.04
GTF3C1-204ENST00000564664 BACE1P56817 501 aa14.83□□□□□ -0.04
GTF3C1-204ENST00000564664 FAM110CQ1W6H9 321 aa14.83□□□□□ -0.04
GTF3C1-204ENST00000564664 COA7Q96BR5 231 aa14.83□□□□□ -0.04
GTF3C1-204ENST00000564664 TLR7Q9NYK1 1049 aaKnown RBP14.83□□□□□ -0.04
GTF3C1-204ENST00000564664 PALD1Q9ULE6 856 aa14.83□□□□□ -0.04
GTF3C1-204ENST00000564664 GJB1P08034 283 aa14.82□□□□□ -0.04
GTF3C1-204ENST00000564664 HOXA7P31268 230 aaPredicted RBP14.82□□□□□ -0.04
GTF3C1-204ENST00000564664 HMGCS2P54868 508 aa14.82□□□□□ -0.04
GTF3C1-204ENST00000564664 PRKCZQ05513 592 aa14.82□□□□□ -0.04
GTF3C1-204ENST00000564664 RRP1BQ14684 758 aaKnown RBP14.82□□□□□ -0.04
GTF3C1-204ENST00000564664 TREML2Q5T2D2 321 aa14.82□□□□□ -0.04
GTF3C1-204ENST00000564664 TTC6Q86TZ1 520 aa14.82□□□□□ -0.04
GTF3C1-204ENST00000564664 MAGEB6Q8N7X4 407 aa14.82□□□□□ -0.04
GTF3C1-204ENST00000564664 TMOD4Q9NZQ9 345 aa14.82□□□□□ -0.04
GTF3C1-204ENST00000564664 BIN2Q9UBW5 565 aaPredicted RBP14.82□□□□□ -0.04
GTF3C1-204ENST00000564664 PTPRFP10586 1907 aa14.82□□□□□ -0.04
GTF3C1-204ENST00000564664 USP17L10C9JJH3 530 aa14.81□□□□□ -0.04
GTF3C1-204ENST00000564664 TNPO2O14787 897 aaKnown RBP14.81□□□□□ -0.04
GTF3C1-204ENST00000564664 IFIT2P09913 472 aaKnown RBP14.81□□□□□ -0.04
GTF3C1-204ENST00000564664 USP5P45974 858 aa14.81□□□□□ -0.04
GTF3C1-204ENST00000564664 DYNLL1P63167 89 aaKnown RBP14.81□□□□□ -0.04
GTF3C1-204ENST00000564664 PDE3AQ14432 1141 aa14.81□□□□□ -0.04
GTF3C1-204ENST00000564664 CCDC84Q86UT8 332 aaPredicted RBP14.81□□□□□ -0.04
GTF3C1-204ENST00000564664 ANKRD13CQ8N6S4 541 aa14.81□□□□□ -0.04
GTF3C1-204ENST00000564664 EHD4Q9H223 541 aa14.81□□□□□ -0.04
GTF3C1-204ENST00000564664 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.81□□□□□ -0.04
GTF3C1-204ENST00000564664 RCAN3Q9UKA8 241 aa14.81□□□□□ -0.04
GTF3C1-204ENST00000564664 TAOK2Q9UL54 1235 aa14.81□□□□□ -0.04
GTF3C1-204ENST00000564664 MAST2Q6P0Q8 1798 aa14.8□□□□□ -0.04
GTF3C1-204ENST00000564664 ADCY3O60266 1144 aa14.8□□□□□ -0.04
GTF3C1-204ENST00000564664 GJA8P48165 433 aa14.8□□□□□ -0.04
GTF3C1-204ENST00000564664 FLT3LGP49771 235 aa14.8□□□□□ -0.04
GTF3C1-204ENST00000564664 TATDN1Q6P1N9 297 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms