RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 SAP30BPQ9UHR5 308 aaKnown RBP22.29■■□□□ 1.16
SPNS1-206ENST00000564476 SNX14Q9Y5W7 946 aa22.29■■□□□ 1.16
SPNS1-206ENST00000564476 CNTNAP1P78357 1384 aa22.28■■□□□ 1.16
SPNS1-206ENST00000564476 ROBO3Q96MS0 1386 aa22.28■■□□□ 1.16
SPNS1-206ENST00000564476 HMGB1P09429 215 aaKnown RBP22.28■■□□□ 1.16
SPNS1-206ENST00000564476 PDE4BQ07343 736 aa22.28■■□□□ 1.16
SPNS1-206ENST00000564476 TRDNQ13061 729 aa22.28■■□□□ 1.16
SPNS1-206ENST00000564476 MFSD6Q6ZSS7 791 aa22.28■■□□□ 1.16
SPNS1-206ENST00000564476 ZFPM1Q8IX07 1006 aa22.28■■□□□ 1.16
SPNS1-206ENST00000564476 SMC1BQ8NDV3 1235 aa22.28■■□□□ 1.16
SPNS1-206ENST00000564476 SWAP70Q9UH65 585 aa22.28■■□□□ 1.16
SPNS1-206ENST00000564476 PLCD1P51178 756 aa22.27■■□□□ 1.16
SPNS1-206ENST00000564476 HAND2P61296 217 aa22.27■■□□□ 1.16
SPNS1-206ENST00000564476 SH3BP5LQ7L8J4 393 aa22.27■■□□□ 1.16
SPNS1-206ENST00000564476 SULF1Q8IWU6 871 aa22.27■■□□□ 1.16
SPNS1-206ENST00000564476 RASEFQ8IZ41 740 aa22.27■■□□□ 1.16
SPNS1-206ENST00000564476 HERC5Q9UII4 1024 aaKnown RBP22.27■■□□□ 1.16
SPNS1-206ENST00000564476 SERPINB13Q9UIV8 391 aa22.27■■□□□ 1.16
SPNS1-206ENST00000564476 ASTN2O75129 1339 aaPredicted RBP22.27■■□□□ 1.16
SPNS1-206ENST00000564476 DDTLA6NHG4 134 aaPredicted RBP22.26■■□□□ 1.15
SPNS1-206ENST00000564476 E7EWF7 191 aa22.26■■□□□ 1.15
SPNS1-206ENST00000564476 TBC1D12O60347 775 aa22.26■■□□□ 1.15
SPNS1-206ENST00000564476 EAPPQ56P03 285 aaPredicted RBP22.26■■□□□ 1.15
SPNS1-206ENST00000564476 KRT23Q9C075 422 aa22.26■■□□□ 1.15
SPNS1-206ENST00000564476 ORC4O43929 436 aa22.25■■□□□ 1.15
SPNS1-206ENST00000564476 CYP2D6P10635 497 aa22.25■■□□□ 1.15
SPNS1-206ENST00000564476 MAP3K10Q02779 954 aa22.25■■□□□ 1.15
SPNS1-206ENST00000564476 GABPAQ06546 454 aa22.25■■□□□ 1.15
SPNS1-206ENST00000564476 SUPT20HL1Q3ZLR7 823 aa22.25■■□□□ 1.15
SPNS1-206ENST00000564476 C16orf86Q6ZW13 317 aa22.25■■□□□ 1.15
SPNS1-206ENST00000564476 CDC37L1Q7L3B6 337 aa22.25■■□□□ 1.15
SPNS1-206ENST00000564476 NCOA7Q8NI08 942 aa22.25■■□□□ 1.15
SPNS1-206ENST00000564476 CSRNP1Q96S65 589 aa22.25■■□□□ 1.15
SPNS1-206ENST00000564476 TMEM39BQ9GZU3 492 aa22.25■■□□□ 1.15
SPNS1-206ENST00000564476 CYP2D7A0A087X1C5 515 aa22.24■■□□□ 1.15
SPNS1-206ENST00000564476 CTDSPL2Q05D32 466 aa22.24■■□□□ 1.15
SPNS1-206ENST00000564476 LDHDQ86WU2 507 aa22.24■■□□□ 1.15
SPNS1-206ENST00000564476 TEPSINQ96N21 525 aa22.24■■□□□ 1.15
SPNS1-206ENST00000564476 NEK1Q96PY6 1258 aa22.24■■□□□ 1.15
SPNS1-206ENST00000564476 TRIM34Q9BYJ4 488 aa22.24■■□□□ 1.15
SPNS1-206ENST00000564476 NBPF3Q9H094 633 aa22.24■■□□□ 1.15
SPNS1-206ENST00000564476 MKNK2Q9HBH9 465 aa22.24■■□□□ 1.15
SPNS1-206ENST00000564476 KRT26Q7Z3Y9 468 aa22.23■■□□□ 1.15
SPNS1-206ENST00000564476 RALYLQ86SE5 291 aaKnown RBP22.23■■□□□ 1.15
SPNS1-206ENST00000564476 TBC1D10CQ8IV04 446 aa22.23■■□□□ 1.15
SPNS1-206ENST00000564476 CRACR2BQ8N4Y2 399 aaPredicted RBP22.23■■□□□ 1.15
SPNS1-206ENST00000564476 KIF2CQ99661 725 aa22.23■■□□□ 1.15
SPNS1-206ENST00000564476 CLEC11AQ9Y240 323 aa22.23■■□□□ 1.15
SPNS1-206ENST00000564476 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.23■■□□□ 1.15
SPNS1-206ENST00000564476 CDK8P49336 464 aa22.22■■□□□ 1.15
SPNS1-206ENST00000564476 HTRA3P83110 453 aa22.22■■□□□ 1.15
SPNS1-206ENST00000564476 ZNF444Q8N0Y2 327 aaPredicted RBP22.22■■□□□ 1.15
SPNS1-206ENST00000564476 DNAJC5GQ8N7S2 189 aa22.22■■□□□ 1.15
SPNS1-206ENST00000564476 ESR2Q92731 530 aa22.22■■□□□ 1.15
SPNS1-206ENST00000564476 MTA3Q9BTC8 594 aa22.22■■□□□ 1.15
SPNS1-206ENST00000564476 ZSWIM6Q9HCJ5 1215 aa22.22■■□□□ 1.15
SPNS1-206ENST00000564476 TAF6LQ9Y6J9 622 aa22.22■■□□□ 1.15
SPNS1-206ENST00000564476 SIPA1L1O43166 1804 aa22.22■■□□□ 1.15
SPNS1-206ENST00000564476 RABEP1Q15276 862 aa22.21■■□□□ 1.15
SPNS1-206ENST00000564476 DCAF15Q66K64 600 aa22.21■■□□□ 1.15
SPNS1-206ENST00000564476 CCDC17Q96LX7 622 aa22.21■■□□□ 1.15
SPNS1-206ENST00000564476 JAKMIP1Q96N16 626 aaKnown RBP22.21■■□□□ 1.15
SPNS1-206ENST00000564476 MYH8P13535 1937 aa22.2■■□□□ 1.14
SPNS1-206ENST00000564476 TATDN1Q6P1N9 297 aa22.2■■□□□ 1.14
SPNS1-206ENST00000564476 BLOC1S2Q6QNY1 142 aa22.2■■□□□ 1.14
SPNS1-206ENST00000564476 STOX1Q6ZVD7 989 aa22.2■■□□□ 1.14
SPNS1-206ENST00000564476 DHX32Q7L7V1 743 aaKnown RBP22.2■■□□□ 1.14
SPNS1-206ENST00000564476 DYNLL2Q96FJ2 89 aa22.2■■□□□ 1.14
SPNS1-206ENST00000564476 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.2■■□□□ 1.14
SPNS1-206ENST00000564476 CYP46A1Q9Y6A2 500 aa22.2■■□□□ 1.14
SPNS1-206ENST00000564476 WDR19Q8NEZ3 1342 aa22.2■■□□□ 1.14
SPNS1-206ENST00000564476 POTEIP0CG38 1075 aa22.19■■□□□ 1.14
SPNS1-206ENST00000564476 POTEJP0CG39 1038 aa22.19■■□□□ 1.14
SPNS1-206ENST00000564476 MCM5P33992 734 aa22.19■■□□□ 1.14
SPNS1-206ENST00000564476 ADCK5Q3MIX3 580 aa22.19■■□□□ 1.14
SPNS1-206ENST00000564476 CCDC178Q5BJE1 867 aa22.19■■□□□ 1.14
SPNS1-206ENST00000564476 RUFY3Q7L099 469 aa22.19■■□□□ 1.14
SPNS1-206ENST00000564476 TSHZ2Q9NRE2 1034 aa22.19■■□□□ 1.14
SPNS1-206ENST00000564476 TOMM22Q9NS69 142 aa22.19■■□□□ 1.14
SPNS1-206ENST00000564476 SMIM22K7EJ46 135 aa22.18■■□□□ 1.14
SPNS1-206ENST00000564476 SLC4A8Q2Y0W8 1093 aa22.18■■□□□ 1.14
SPNS1-206ENST00000564476 NBPF12Q5TAG4 269 aaPredicted RBP22.18■■□□□ 1.14
SPNS1-206ENST00000564476 USP48Q86UV5 1035 aa22.18■■□□□ 1.14
SPNS1-206ENST00000564476 GINM1Q9NU53 330 aa22.18■■□□□ 1.14
SPNS1-206ENST00000564476 ZSWIM5Q9P217 1185 aa22.18■■□□□ 1.14
SPNS1-206ENST00000564476 TACC3Q9Y6A5 838 aa22.18■■□□□ 1.14
SPNS1-206ENST00000564476 CASTP20810 708 aaKnown RBP22.17■■□□□ 1.14
SPNS1-206ENST00000564476 RASA1P20936 1047 aa22.17■■□□□ 1.14
SPNS1-206ENST00000564476 RPS6KB1P23443 525 aa22.17■■□□□ 1.14
SPNS1-206ENST00000564476 SHMT1P34896 483 aa22.17■■□□□ 1.14
SPNS1-206ENST00000564476 NF2P35240 595 aa22.17■■□□□ 1.14
SPNS1-206ENST00000564476 EVX2Q03828 476 aa22.17■■□□□ 1.14
SPNS1-206ENST00000564476 MB21D2Q8IYB1 491 aaPredicted RBP22.17■■□□□ 1.14
SPNS1-206ENST00000564476 FBXL16Q8N461 479 aa22.17■■□□□ 1.14
SPNS1-206ENST00000564476 ALDH8A1Q9H2A2 487 aaPredicted RBP22.17■■□□□ 1.14
SPNS1-206ENST00000564476 NEDD4P46934 1319 aa22.16■■□□□ 1.14
SPNS1-206ENST00000564476 B4E1Z4 1266 aa22.16■■□□□ 1.14
SPNS1-206ENST00000564476 RANBP6O60518 1105 aaKnown RBP22.16■■□□□ 1.14
SPNS1-206ENST00000564476 EXOSC10Q01780 885 aaKnown RBP22.16■■□□□ 1.14
SPNS1-206ENST00000564476 CERKLQ49MI3 558 aaPredicted RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms