RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 KANK3Q6NY19 840 aa8.74□□□□□ -1.01
HERPUD1-208ENST00000563911 RELL1Q8IUW5 271 aa8.74□□□□□ -1.01
HERPUD1-208ENST00000563911 CACTIN-AS1Q8N1I8 211 aa8.74□□□□□ -1.01
HERPUD1-208ENST00000563911 IL22RA1Q8N6P7 574 aa8.74□□□□□ -1.01
HERPUD1-208ENST00000563911 ANKRD24Q8TF21 1146 aa8.74□□□□□ -1.01
HERPUD1-208ENST00000563911 TGIF2Q9GZN2 237 aa8.74□□□□□ -1.01
HERPUD1-208ENST00000563911 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.74□□□□□ -1.01
HERPUD1-208ENST00000563911 PCDHGB7Q9Y5F8 929 aa8.74□□□□□ -1.01
HERPUD1-208ENST00000563911 ADGRL2O95490 1459 aa8.74□□□□□ -1.01
HERPUD1-208ENST00000563911 RPRD2Q5VT52 1461 aaKnown RBP8.74□□□□□ -1.01
HERPUD1-208ENST00000563911 XRN1Q8IZH2 1706 aaKnown RBP8.74□□□□□ -1.01
HERPUD1-208ENST00000563911 ATRNO75882 1429 aa8.73□□□□□ -1.01
HERPUD1-208ENST00000563911 ANKRD50Q9ULJ7 1429 aa8.73□□□□□ -1.01
HERPUD1-208ENST00000563911 E9PCH4 1651 aa8.73□□□□□ -1.01
HERPUD1-208ENST00000563911 BCL9LQ86UU0 1499 aa8.73□□□□□ -1.01
HERPUD1-208ENST00000563911 M0R082 166 aa8.73□□□□□ -1.01
HERPUD1-208ENST00000563911 LILRB5O75023 590 aa8.73□□□□□ -1.01
HERPUD1-208ENST00000563911 SLURP2P0DP57 97 aa8.73□□□□□ -1.01
HERPUD1-208ENST00000563911 CDC25BP30305 580 aa8.73□□□□□ -1.01
HERPUD1-208ENST00000563911 FAAP100Q0VG06 881 aa8.73□□□□□ -1.01
HERPUD1-208ENST00000563911 MAP3K11Q16584 847 aa8.73□□□□□ -1.01
HERPUD1-208ENST00000563911 C20orf204Q6ZNR8 217 aa8.73□□□□□ -1.01
HERPUD1-208ENST00000563911 CHSY3Q70JA7 882 aa8.73□□□□□ -1.01
HERPUD1-208ENST00000563911 VN1R5Q7Z5H4 357 aa8.73□□□□□ -1.01
HERPUD1-208ENST00000563911 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.73□□□□□ -1.01
HERPUD1-208ENST00000563911 ZNF417Q8TAU3 575 aa8.73□□□□□ -1.01
HERPUD1-208ENST00000563911 BTBD6Q96KE9 485 aa8.73□□□□□ -1.01
HERPUD1-208ENST00000563911 ZNF587Q96SQ5 575 aaPredicted RBP8.73□□□□□ -1.01
HERPUD1-208ENST00000563911 TRIM56Q9BRZ2 755 aaKnown RBP8.73□□□□□ -1.01
HERPUD1-208ENST00000563911 COPRSQ9NQ92 184 aa8.73□□□□□ -1.01
HERPUD1-208ENST00000563911 USP21Q9UK80 565 aa8.73□□□□□ -1.01
HERPUD1-208ENST00000563911 DCCP43146 1447 aa8.72□□□□□ -1.01
HERPUD1-208ENST00000563911 F6X3S4 739 aa8.72□□□□□ -1.01
HERPUD1-208ENST00000563911 CELA3AP09093 270 aa8.72□□□□□ -1.01
HERPUD1-208ENST00000563911 RLBP1P12271 317 aa8.72□□□□□ -1.01
HERPUD1-208ENST00000563911 AFF1P51825 1210 aaKnown RBP8.72□□□□□ -1.01
HERPUD1-208ENST00000563911 MAP3K10Q02779 954 aa8.72□□□□□ -1.01
HERPUD1-208ENST00000563911 PPP2R3AQ06190 1150 aa8.72□□□□□ -1.01
HERPUD1-208ENST00000563911 IKBKEQ14164 716 aa8.72□□□□□ -1.01
HERPUD1-208ENST00000563911 C8orf86Q6ZUL3 223 aa8.72□□□□□ -1.01
HERPUD1-208ENST00000563911 ERMP1Q7Z2K6 904 aa8.72□□□□□ -1.01
HERPUD1-208ENST00000563911 ZNF654Q8IZM8 581 aa8.72□□□□□ -1.01
HERPUD1-208ENST00000563911 NECAB3Q96P71 396 aaPredicted RBP8.72□□□□□ -1.01
HERPUD1-208ENST00000563911 TMEM39AQ9NV64 488 aa8.72□□□□□ -1.01
HERPUD1-208ENST00000563911 KBTBD4Q9NVX7 518 aa8.72□□□□□ -1.01
HERPUD1-208ENST00000563911 DDX41Q9UJV9 622 aaKnown RBP8.72□□□□□ -1.01
HERPUD1-208ENST00000563911 C1orf167Q5SNV9 1468 aa8.71□□□□□ -1.01
HERPUD1-208ENST00000563911 EPHA1P21709 976 aa8.71□□□□□ -1.02
HERPUD1-208ENST00000563911 RACK1P63244 317 aaKnown RBP8.71□□□□□ -1.02
HERPUD1-208ENST00000563911 PWP1Q13610 501 aa8.71□□□□□ -1.02
HERPUD1-208ENST00000563911 GRIK5Q16478 980 aa8.71□□□□□ -1.02
HERPUD1-208ENST00000563911 ZNF423Q2M1K9 1284 aa8.71□□□□□ -1.02
HERPUD1-208ENST00000563911 NAALADL2Q58DX5 795 aa8.71□□□□□ -1.02
HERPUD1-208ENST00000563911 LYPD4Q6UWN0 246 aa8.71□□□□□ -1.02
HERPUD1-208ENST00000563911 DEFB132Q7Z7B7 95 aa8.71□□□□□ -1.02
HERPUD1-208ENST00000563911 ZNF775Q96BV0 537 aaPredicted RBP8.71□□□□□ -1.02
HERPUD1-208ENST00000563911 RSRP1Q9BUV0 290 aa8.71□□□□□ -1.02
HERPUD1-208ENST00000563911 ACBD3Q9H3P7 528 aa8.71□□□□□ -1.02
HERPUD1-208ENST00000563911 SRA1Q9HD15 236 aaKnown RBP8.71□□□□□ -1.02
HERPUD1-208ENST00000563911 PPME1Q9Y570 386 aa8.71□□□□□ -1.02
HERPUD1-208ENST00000563911 MINDY4BA8MYZ0 360 aa8.7□□□□□ -1.02
HERPUD1-208ENST00000563911 SHISA8B8ZZ34 492 aa8.7□□□□□ -1.02
HERPUD1-208ENST00000563911 ENC1O14682 589 aa8.7□□□□□ -1.02
HERPUD1-208ENST00000563911 CELA2BP08218 269 aaPredicted RBP8.7□□□□□ -1.02
HERPUD1-208ENST00000563911 ESRRAP11474 423 aaPredicted RBP8.7□□□□□ -1.02
HERPUD1-208ENST00000563911 GBP2P32456 591 aaPredicted RBP8.7□□□□□ -1.02
HERPUD1-208ENST00000563911 LCE2CQ5TA81 110 aa8.7□□□□□ -1.02
HERPUD1-208ENST00000563911 CAPN10Q9HC96 672 aa8.7□□□□□ -1.02
HERPUD1-208ENST00000563911 LRRC4BQ9NT99 713 aa8.7□□□□□ -1.02
HERPUD1-208ENST00000563911 TRPC5Q9UL62 973 aaPredicted RBP8.7□□□□□ -1.02
HERPUD1-208ENST00000563911 NALCNQ8IZF0 1738 aa8.7□□□□□ -1.02
HERPUD1-208ENST00000563911 ADGRL3Q9HAR2 1447 aa8.7□□□□□ -1.02
HERPUD1-208ENST00000563911 H3BRJ5 948 aa8.69□□□□□ -1.02
HERPUD1-208ENST00000563911 LINC01387J3KSC0 135 aa8.69□□□□□ -1.02
HERPUD1-208ENST00000563911 B3GALT4O96024 378 aa8.69□□□□□ -1.02
HERPUD1-208ENST00000563911 FAM117BQ6P1L5 589 aa8.69□□□□□ -1.02
HERPUD1-208ENST00000563911 TXNDC11Q6PKC3 985 aa8.69□□□□□ -1.02
HERPUD1-208ENST00000563911 WFDC8Q8IUA0 241 aa8.69□□□□□ -1.02
HERPUD1-208ENST00000563911 DDX54Q8TDD1 881 aaKnown RBP8.69□□□□□ -1.02
HERPUD1-208ENST00000563911 SLC7A3Q8WY07 619 aa8.69□□□□□ -1.02
HERPUD1-208ENST00000563911 ROBO2Q9HCK4 1378 aa8.69□□□□□ -1.02
HERPUD1-208ENST00000563911 LAMC1P11047 1609 aa8.69□□□□□ -1.02
HERPUD1-208ENST00000563911 SOX1O00570 391 aaPredicted RBP8.68□□□□□ -1.02
HERPUD1-208ENST00000563911 PAGE1O75459 146 aa8.68□□□□□ -1.02
HERPUD1-208ENST00000563911 BAG6P46379 1132 aa8.68□□□□□ -1.02
HERPUD1-208ENST00000563911 LIG3P49916 1009 aa8.68□□□□□ -1.02
HERPUD1-208ENST00000563911 FAM50AQ14320 339 aaKnown RBP8.68□□□□□ -1.02
HERPUD1-208ENST00000563911 TTBK2Q6IQ55 1244 aa8.68□□□□□ -1.02
HERPUD1-208ENST00000563911 WHAMMQ8TF30 809 aa8.68□□□□□ -1.02
HERPUD1-208ENST00000563911 TMEM74Q96NL1 305 aa8.68□□□□□ -1.02
HERPUD1-208ENST00000563911 INPP5FQ9Y2H2 1132 aa8.68□□□□□ -1.02
HERPUD1-208ENST00000563911 SAMM50Q9Y512 469 aa8.68□□□□□ -1.02
HERPUD1-208ENST00000563911 TNNI2P48788 182 aa8.67□□□□□ -1.02
HERPUD1-208ENST00000563911 ARL4DP49703 201 aa8.67□□□□□ -1.02
HERPUD1-208ENST00000563911 MYOM2P54296 1465 aa8.67□□□□□ -1.02
HERPUD1-208ENST00000563911 GNL2Q13823 731 aaKnown RBP8.67□□□□□ -1.02
HERPUD1-208ENST00000563911 MSL1Q68DK7 614 aa8.67□□□□□ -1.02
HERPUD1-208ENST00000563911 RRAGCQ9HB90 399 aa8.67□□□□□ -1.02
HERPUD1-208ENST00000563911 TLR6Q9Y2C9 796 aa8.67□□□□□ -1.02
HERPUD1-208ENST00000563911 GLI3P10071 1580 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms