RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 A0A0G2JLL6 359 aaPredicted RBP21.56■■□□□ 1.04
NME3-205ENST00000563854 TBC1D12O60347 775 aa21.56■■□□□ 1.04
NME3-205ENST00000563854 CYP2C8P10632 490 aa21.56■■□□□ 1.04
NME3-205ENST00000563854 C20orf194Q5TEA3 1177 aa21.56■■□□□ 1.04
NME3-205ENST00000563854 GPAT2Q6NUI2 795 aa21.56■■□□□ 1.04
NME3-205ENST00000563854 FASTKD5Q7L8L6 764 aaKnown RBP21.56■■□□□ 1.04
NME3-205ENST00000563854 PRRT2Q7Z6L0 340 aaPredicted RBP21.56■■□□□ 1.04
NME3-205ENST00000563854 MAGEB6Q8N7X4 407 aa21.56■■□□□ 1.04
NME3-205ENST00000563854 TRIM34Q9BYJ4 488 aa21.56■■□□□ 1.04
NME3-205ENST00000563854 ANTXR1Q9H6X2 564 aa21.56■■□□□ 1.04
NME3-205ENST00000563854 SAP30BPQ9UHR5 308 aaKnown RBP21.56■■□□□ 1.04
NME3-205ENST00000563854 PPP4CP60510 307 aa21.55■■□□□ 1.04
NME3-205ENST00000563854 C17orf99Q6UX52 265 aa21.55■■□□□ 1.04
NME3-205ENST00000563854 CLASRPQ8N2M8 674 aaKnown RBP21.55■■□□□ 1.04
NME3-205ENST00000563854 KIF1BPQ96EK5 621 aa21.55■■□□□ 1.04
NME3-205ENST00000563854 CHMP4BQ9H444 224 aaKnown RBP21.55■■□□□ 1.04
NME3-205ENST00000563854 MYCP01106 439 aaPredicted RBP21.54■■□□□ 1.04
NME3-205ENST00000563854 IFIT2P09913 472 aaKnown RBP21.54■■□□□ 1.04
NME3-205ENST00000563854 MAP3K12Q12852 859 aa21.54■■□□□ 1.04
NME3-205ENST00000563854 SLC9C1Q4G0N8 1177 aa21.54■■□□□ 1.04
NME3-205ENST00000563854 SIRT2Q8IXJ6 389 aa21.54■■□□□ 1.04
NME3-205ENST00000563854 CRACR2BQ8N4Y2 399 aaPredicted RBP21.54■■□□□ 1.04
NME3-205ENST00000563854 DHX36Q9H2U1 1008 aaKnown RBP21.54■■□□□ 1.04
NME3-205ENST00000563854 PI4KBQ9UBF8 816 aa21.54■■□□□ 1.04
NME3-205ENST00000563854 HERC5Q9UII4 1024 aaKnown RBP21.54■■□□□ 1.04
NME3-205ENST00000563854 PHIPQ8WWQ0 1821 aa21.54■■□□□ 1.04
NME3-205ENST00000563854 ATAD5Q96QE3 1844 aa21.54■■□□□ 1.04
NME3-205ENST00000563854 TNRC18O15417 2968 aaPredicted RBP21.54■■□□□ 1.04
NME3-205ENST00000563854 CDK5RAP2Q96SN8 1893 aa21.54■■□□□ 1.04
NME3-205ENST00000563854 ADGRA2Q96PE1 1338 aa21.54■■□□□ 1.04
NME3-205ENST00000563854 DNAJC2Q99543 621 aaKnown RBP21.53■■□□□ 1.04
NME3-205ENST00000563854 PALD1Q9ULE6 856 aa21.53■■□□□ 1.04
NME3-205ENST00000563854 SIPA1L1O43166 1804 aa21.52■■□□□ 1.04
NME3-205ENST00000563854 POTEFA5A3E0 1075 aa21.52■■□□□ 1.04
NME3-205ENST00000563854 FMNL1O95466 1100 aaPredicted RBP21.52■■□□□ 1.04
NME3-205ENST00000563854 CAP2P40123 477 aa21.52■■□□□ 1.04
NME3-205ENST00000563854 PSMC4P43686 418 aa21.52■■□□□ 1.04
NME3-205ENST00000563854 USP5P45974 858 aa21.52■■□□□ 1.04
NME3-205ENST00000563854 RRP1BQ14684 758 aaKnown RBP21.52■■□□□ 1.04
NME3-205ENST00000563854 ARMC5Q96C12 935 aa21.52■■□□□ 1.04
NME3-205ENST00000563854 FOCADQ5VW36 1801 aa21.52■■□□□ 1.04
NME3-205ENST00000563854 PTPRFP10586 1907 aa21.51■■□□□ 1.03
NME3-205ENST00000563854 IGSF3O75054 1194 aa21.51■■□□□ 1.03
NME3-205ENST00000563854 HLA-DOAP06340 250 aa21.51■■□□□ 1.03
NME3-205ENST00000563854 SPP2Q13103 211 aa21.51■■□□□ 1.03
NME3-205ENST00000563854 SMCR8Q8TEV9 937 aaPredicted RBP21.51■■□□□ 1.03
NME3-205ENST00000563854 RAB11FIP3O75154 756 aa21.5■■□□□ 1.03
NME3-205ENST00000563854 CTGFP29279 349 aa21.5■■□□□ 1.03
NME3-205ENST00000563854 NBPF11Q86T75 865 aa21.5■■□□□ 1.03
NME3-205ENST00000563854 ZNF280CQ8ND82 737 aa21.5■■□□□ 1.03
NME3-205ENST00000563854 SH3TC2Q8TF17 1288 aa21.5■■□□□ 1.03
NME3-205ENST00000563854 TRIM47Q96LD4 638 aa21.5■■□□□ 1.03
NME3-205ENST00000563854 AGTPBP1Q9UPW5 1226 aa21.5■■□□□ 1.03
NME3-205ENST00000563854 USP17L5A8MUK1 530 aa21.49■■□□□ 1.03
NME3-205ENST00000563854 GOLIM4O00461 696 aa21.49■■□□□ 1.03
NME3-205ENST00000563854 GDF11O95390 407 aa21.49■■□□□ 1.03
NME3-205ENST00000563854 HMGCS2P54868 508 aa21.49■■□□□ 1.03
NME3-205ENST00000563854 PDE3AQ14432 1141 aa21.49■■□□□ 1.03
NME3-205ENST00000563854 TTF1Q15361 905 aaPredicted RBP21.49■■□□□ 1.03
NME3-205ENST00000563854 TREML2Q5T2D2 321 aa21.49■■□□□ 1.03
NME3-205ENST00000563854 ZNF333Q96JL9 665 aa21.49■■□□□ 1.03
NME3-205ENST00000563854 DNAJC18Q9H819 358 aa21.49■■□□□ 1.03
NME3-205ENST00000563854 GNRH1P01148 92 aa21.48■■□□□ 1.03
NME3-205ENST00000563854 BCRP11274 1271 aa21.48■■□□□ 1.03
NME3-205ENST00000563854 OSBPP22059 807 aa21.48■■□□□ 1.03
NME3-205ENST00000563854 TMEM106CQ9BVX2 250 aa21.48■■□□□ 1.03
NME3-205ENST00000563854 AS3MTQ9HBK9 375 aa21.48■■□□□ 1.03
NME3-205ENST00000563854 SLC45A1Q9Y2W3 748 aa21.48■■□□□ 1.03
NME3-205ENST00000563854 CENPFP49454 3210 aa21.48■■□□□ 1.03
NME3-205ENST00000563854 MYPNQ86TC9 1320 aa21.48■■□□□ 1.03
NME3-205ENST00000563854 HOXD10P28358 340 aa21.47■■□□□ 1.03
NME3-205ENST00000563854 FCGRTP55899 365 aa21.47■■□□□ 1.03
NME3-205ENST00000563854 SHROOM1Q2M3G4 852 aaPredicted RBP21.47■■□□□ 1.03
NME3-205ENST00000563854 CERS3Q8IU89 383 aa21.47■■□□□ 1.03
NME3-205ENST00000563854 FOXP4Q8IVH2 680 aaPredicted RBP21.47■■□□□ 1.03
NME3-205ENST00000563854 RAET1EQ8TD07 263 aa21.47■■□□□ 1.03
NME3-205ENST00000563854 EDC3Q96F86 508 aaKnown RBP21.47■■□□□ 1.03
NME3-205ENST00000563854 TBC1D2Q9BYX2 928 aa21.47■■□□□ 1.03
NME3-205ENST00000563854 SRRDQ9UH36 339 aa21.47■■□□□ 1.03
NME3-205ENST00000563854 PDE4DIPQ5VU43 2346 aa21.47■■□□□ 1.03
NME3-205ENST00000563854 MAGEB6P1A0A0J9YX57 407 aa21.46■■□□□ 1.03
NME3-205ENST00000563854 SLC34A2O95436 690 aa21.46■■□□□ 1.03
NME3-205ENST00000563854 ASNSP08243 561 aa21.46■■□□□ 1.03
NME3-205ENST00000563854 PDE6AP16499 860 aa21.46■■□□□ 1.03
NME3-205ENST00000563854 PRMT2P55345 433 aa21.46■■□□□ 1.03
NME3-205ENST00000563854 SLC9C2Q5TAH2 1124 aa21.46■■□□□ 1.03
NME3-205ENST00000563854 PROCA1Q8NCQ7 364 aaPredicted RBP21.46■■□□□ 1.03
NME3-205ENST00000563854 PNMA3Q9UL41 463 aa21.46■■□□□ 1.03
NME3-205ENST00000563854 LOC285556D6RIA3 1793 aa21.46■■□□□ 1.03
NME3-205ENST00000563854 MYH1P12882 1939 aa21.45■■□□□ 1.02
NME3-205ENST00000563854 EN2P19622 333 aaPredicted RBP21.45■■□□□ 1.02
NME3-205ENST00000563854 JAG1P78504 1218 aa21.45■■□□□ 1.02
NME3-205ENST00000563854 MTMR2Q13614 643 aa21.45■■□□□ 1.02
NME3-205ENST00000563854 BOLA2Q9H3K6 86 aa21.45■■□□□ 1.02
NME3-205ENST00000563854 RBBP6Q7Z6E9 1792 aaKnown RBP21.45■■□□□ 1.02
NME3-205ENST00000563854 PRKCZQ05513 592 aa21.44■■□□□ 1.02
NME3-205ENST00000563854 ANKRD13CQ8N6S4 541 aa21.44■■□□□ 1.02
NME3-205ENST00000563854 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.44■■□□□ 1.02
NME3-205ENST00000563854 TMOD4Q9NZQ9 345 aa21.44■■□□□ 1.02
NME3-205ENST00000563854 ZBTB21Q9ULJ3 1066 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms