RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 CFHR5Q9BXR6 569 aa20.61■□□□□ 0.89
SPSB3-202ENST00000563668 SAP30BPQ9UHR5 308 aaKnown RBP20.61■□□□□ 0.89
SPSB3-202ENST00000563668 PALD1Q9ULE6 856 aa20.61■□□□□ 0.89
SPSB3-202ENST00000563668 SIPA1L1O43166 1804 aa20.6■□□□□ 0.89
SPSB3-202ENST00000563668 TCRBV5S4A2TA0A5A2 114 aa20.6■□□□□ 0.89
SPSB3-202ENST00000563668 IGSF3O75054 1194 aa20.6■□□□□ 0.89
SPSB3-202ENST00000563668 PLCG2P16885 1265 aa20.6■□□□□ 0.89
SPSB3-202ENST00000563668 GTF2A2P52657 109 aa20.6■□□□□ 0.89
SPSB3-202ENST00000563668 PPATQ06203 517 aa20.6■□□□□ 0.89
SPSB3-202ENST00000563668 CRHR2Q13324 411 aa20.6■□□□□ 0.89
SPSB3-202ENST00000563668 TTF1Q15361 905 aaPredicted RBP20.6■□□□□ 0.89
SPSB3-202ENST00000563668 DDRGK1Q96HY6 314 aa20.6■□□□□ 0.89
SPSB3-202ENST00000563668 RIOK1Q9BRS2 568 aaKnown RBP20.6■□□□□ 0.89
SPSB3-202ENST00000563668 MCOLN1Q9GZU1 580 aa20.6■□□□□ 0.89
SPSB3-202ENST00000563668 PAG1Q9NWQ8 432 aa20.6■□□□□ 0.89
SPSB3-202ENST00000563668 ZBTB47Q9UFB7 747 aaPredicted RBP20.6■□□□□ 0.89
SPSB3-202ENST00000563668 COL2A1P02458 1487 aaPredicted RBP20.6■□□□□ 0.89
SPSB3-202ENST00000563668 TBC1D12O60347 775 aa20.59■□□□□ 0.89
SPSB3-202ENST00000563668 ALDH1A1P00352 501 aa20.59■□□□□ 0.89
SPSB3-202ENST00000563668 DGKZQ13574 1117 aa20.59■□□□□ 0.89
SPSB3-202ENST00000563668 SCYL3Q8IZE3 742 aa20.59■□□□□ 0.89
SPSB3-202ENST00000563668 OTUD7AQ8TE49 926 aaPredicted RBP20.59■□□□□ 0.89
SPSB3-202ENST00000563668 LNPKQ9C0E8 428 aa20.59■□□□□ 0.89
SPSB3-202ENST00000563668 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.59■□□□□ 0.89
SPSB3-202ENST00000563668 ZNF532Q9HCE3 1301 aa20.59■□□□□ 0.89
SPSB3-202ENST00000563668 MOGSQ13724 837 aa20.58■□□□□ 0.89
SPSB3-202ENST00000563668 ABHD8Q96I13 439 aa20.58■□□□□ 0.89
SPSB3-202ENST00000563668 DNAJC18Q9H819 358 aa20.58■□□□□ 0.89
SPSB3-202ENST00000563668 FOCADQ5VW36 1801 aa20.58■□□□□ 0.89
SPSB3-202ENST00000563668 BTBD19C9JJ37 291 aa20.58■□□□□ 0.88
SPSB3-202ENST00000563668 PTPRAP18433 802 aa20.58■□□□□ 0.88
SPSB3-202ENST00000563668 JAG1P78504 1218 aa20.58■□□□□ 0.88
SPSB3-202ENST00000563668 SNAPC2Q13487 334 aa20.58■□□□□ 0.88
SPSB3-202ENST00000563668 ANKRD45Q5TZF3 282 aa20.58■□□□□ 0.88
SPSB3-202ENST00000563668 ECHDC1Q9NTX5 307 aa20.58■□□□□ 0.88
SPSB3-202ENST00000563668 ZHX2Q9Y6X8 837 aa20.58■□□□□ 0.88
SPSB3-202ENST00000563668 SEC24BO95487 1268 aa20.57■□□□□ 0.88
SPSB3-202ENST00000563668 CAP1Q01518 475 aa20.57■□□□□ 0.88
SPSB3-202ENST00000563668 SHROOM1Q2M3G4 852 aaPredicted RBP20.57■□□□□ 0.88
SPSB3-202ENST00000563668 PI4KBQ9UBF8 816 aa20.57■□□□□ 0.88
SPSB3-202ENST00000563668 KCNH4Q9UQ05 1017 aa20.57■□□□□ 0.88
SPSB3-202ENST00000563668 CTNND1O60716 968 aaKnown RBP20.56■□□□□ 0.88
SPSB3-202ENST00000563668 CETPP11597 493 aa20.56■□□□□ 0.88
SPSB3-202ENST00000563668 EVX2Q03828 476 aa20.56■□□□□ 0.88
SPSB3-202ENST00000563668 MAGEB6P1A0A0J9YX57 407 aa20.55■□□□□ 0.88
SPSB3-202ENST00000563668 ADD2P35612 726 aa20.55■□□□□ 0.88
SPSB3-202ENST00000563668 NOM1Q5C9Z4 860 aaKnown RBP20.55■□□□□ 0.88
SPSB3-202ENST00000563668 OTUD7BQ6GQQ9 843 aa20.55■□□□□ 0.88
SPSB3-202ENST00000563668 LCORLQ8N3X6 602 aa20.55■□□□□ 0.88
SPSB3-202ENST00000563668 DHX36Q9H2U1 1008 aaKnown RBP20.55■□□□□ 0.88
SPSB3-202ENST00000563668 PICK1Q9NRD5 415 aa20.55■□□□□ 0.88
SPSB3-202ENST00000563668 AFG3L2Q9Y4W6 797 aa20.55■□□□□ 0.88
SPSB3-202ENST00000563668 FKTNO75072 461 aa20.54■□□□□ 0.88
SPSB3-202ENST00000563668 USP5P45974 858 aa20.54■□□□□ 0.88
SPSB3-202ENST00000563668 METTL16Q86W50 562 aaKnown RBP20.54■□□□□ 0.88
SPSB3-202ENST00000563668 PHIPQ8WWQ0 1821 aa20.54■□□□□ 0.88
SPSB3-202ENST00000563668 DOCK1Q14185 1865 aa20.54■□□□□ 0.88
SPSB3-202ENST00000563668 CAP2P40123 477 aa20.53■□□□□ 0.88
SPSB3-202ENST00000563668 TAF1CQ15572 869 aaPredicted RBP20.53■□□□□ 0.88
SPSB3-202ENST00000563668 GPAT2Q6NUI2 795 aa20.53■□□□□ 0.88
SPSB3-202ENST00000563668 CTU1Q7Z7A3 348 aaKnown RBP20.53■□□□□ 0.88
SPSB3-202ENST00000563668 ARMT1Q9H993 441 aa20.53■□□□□ 0.88
SPSB3-202ENST00000563668 HTTP42858 3142 aa20.53■□□□□ 0.88
SPSB3-202ENST00000563668 PRKAB2O43741 272 aa20.53■□□□□ 0.88
SPSB3-202ENST00000563668 TMED8Q6PL24 325 aaPredicted RBP20.53■□□□□ 0.88
SPSB3-202ENST00000563668 SDR42E1Q8WUS8 393 aa20.53■□□□□ 0.88
SPSB3-202ENST00000563668 HERC5Q9UII4 1024 aaKnown RBP20.53■□□□□ 0.88
SPSB3-202ENST00000563668 CXCL11O14625 94 aa20.52■□□□□ 0.87
SPSB3-202ENST00000563668 PLCD1P51178 756 aa20.52■□□□□ 0.87
SPSB3-202ENST00000563668 FOXP4Q8IVH2 680 aaPredicted RBP20.52■□□□□ 0.87
SPSB3-202ENST00000563668 PI4K2BQ8TCG2 481 aa20.52■□□□□ 0.87
SPSB3-202ENST00000563668 MYH1P12882 1939 aa20.52■□□□□ 0.87
SPSB3-202ENST00000563668 CENPFP49454 3210 aa20.51■□□□□ 0.87
SPSB3-202ENST00000563668 TRIM75PA6NK02 468 aa20.51■□□□□ 0.87
SPSB3-202ENST00000563668 BMP2KLQ5H9B9 411 aa20.51■□□□□ 0.87
SPSB3-202ENST00000563668 A0A0G2JLL6 359 aaPredicted RBP20.5■□□□□ 0.87
SPSB3-202ENST00000563668 SMIM22K7EJ46 135 aa20.5■□□□□ 0.87
SPSB3-202ENST00000563668 PDHXO00330 501 aa20.5■□□□□ 0.87
SPSB3-202ENST00000563668 MBD4O95243 580 aa20.5■□□□□ 0.87
SPSB3-202ENST00000563668 PRRT2Q7Z6L0 340 aaPredicted RBP20.5■□□□□ 0.87
SPSB3-202ENST00000563668 CERS3Q8IU89 383 aa20.5■□□□□ 0.87
SPSB3-202ENST00000563668 CRACR2BQ8N4Y2 399 aaPredicted RBP20.5■□□□□ 0.87
SPSB3-202ENST00000563668 CD99L2Q8TCZ2 262 aa20.5■□□□□ 0.87
SPSB3-202ENST00000563668 PUS7LQ9H0K6 701 aaKnown RBP20.5■□□□□ 0.87
SPSB3-202ENST00000563668 ZFYVE28Q9HCC9 887 aa20.5■□□□□ 0.87
SPSB3-202ENST00000563668 SALL3Q9BXA9 1300 aa20.5■□□□□ 0.87
SPSB3-202ENST00000563668 ATAD5Q96QE3 1844 aa20.5■□□□□ 0.87
SPSB3-202ENST00000563668 GDF11O95390 407 aa20.49■□□□□ 0.87
SPSB3-202ENST00000563668 UBE3CQ15386 1083 aa20.49■□□□□ 0.87
SPSB3-202ENST00000563668 ANKRD23Q86SG2 305 aa20.49■□□□□ 0.87
SPSB3-202ENST00000563668 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.49■□□□□ 0.872e-17■■■■■ 95.5
SPSB3-202ENST00000563668 DDX60LQ5H9U9 1706 aaKnown RBP20.49■□□□□ 0.87
SPSB3-202ENST00000563668 CYP2D6P10635 497 aa20.48■□□□□ 0.87
SPSB3-202ENST00000563668 SP3Q02447 781 aa20.48■□□□□ 0.87
SPSB3-202ENST00000563668 SPP2Q13103 211 aa20.48■□□□□ 0.87
SPSB3-202ENST00000563668 KBTBD3Q8NAB2 608 aa20.48■□□□□ 0.87
SPSB3-202ENST00000563668 GPATCH3Q96I76 525 aa20.48■□□□□ 0.87
SPSB3-202ENST00000563668 CRNKL1Q9BZJ0 848 aaKnown RBP20.48■□□□□ 0.87
SPSB3-202ENST00000563668 DCP1AQ9NPI6 582 aaPredicted RBP20.48■□□□□ 0.87
SPSB3-202ENST00000563668 PTPRFP10586 1907 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms