RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 PTPRAP18433 802 aa17.99■□□□□ 0.47
RPUSD1-204ENST00000563560 JAG1P78504 1218 aa17.99■□□□□ 0.47
RPUSD1-204ENST00000563560 CRHR2Q13324 411 aa17.99■□□□□ 0.47
RPUSD1-204ENST00000563560 CCL15Q16663 113 aa17.99■□□□□ 0.47
RPUSD1-204ENST00000563560 SLC9C2Q5TAH2 1124 aa17.99■□□□□ 0.47
RPUSD1-204ENST00000563560 OTUD7AQ8TE49 926 aaPredicted RBP17.99■□□□□ 0.47
RPUSD1-204ENST00000563560 ECHDC1Q9NTX5 307 aa17.99■□□□□ 0.47
RPUSD1-204ENST00000563560 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.99■□□□□ 0.47
RPUSD1-204ENST00000563560 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.99■□□□□ 0.47
RPUSD1-204ENST00000563560 CTNND1O60716 968 aaKnown RBP17.98■□□□□ 0.47
RPUSD1-204ENST00000563560 ADD2P35612 726 aa17.98■□□□□ 0.47
RPUSD1-204ENST00000563560 AAMPQ13685 434 aa17.98■□□□□ 0.47
RPUSD1-204ENST00000563560 ZSCAN29Q8IWY8 852 aaPredicted RBP17.98■□□□□ 0.47
RPUSD1-204ENST00000563560 PI4K2BQ8TCG2 481 aa17.98■□□□□ 0.47
RPUSD1-204ENST00000563560 DHX36Q9H2U1 1008 aaKnown RBP17.98■□□□□ 0.47
RPUSD1-204ENST00000563560 HERC5Q9UII4 1024 aaKnown RBP17.98■□□□□ 0.47
RPUSD1-204ENST00000563560 AFG3L2Q9Y4W6 797 aa17.98■□□□□ 0.47
RPUSD1-204ENST00000563560 MYH8P13535 1937 aa17.98■□□□□ 0.47
RPUSD1-204ENST00000563560 ADGRA2Q96PE1 1338 aa17.98■□□□□ 0.47
RPUSD1-204ENST00000563560 BTBD19C9JJ37 291 aa17.97■□□□□ 0.47
RPUSD1-204ENST00000563560 TSHZ3Q63HK5 1081 aa17.97■□□□□ 0.47
RPUSD1-204ENST00000563560 GPAT2Q6NUI2 795 aa17.97■□□□□ 0.47
RPUSD1-204ENST00000563560 CERS3Q8IU89 383 aa17.97■□□□□ 0.47
RPUSD1-204ENST00000563560 EXOC6Q8TAG9 804 aa17.97■□□□□ 0.47
RPUSD1-204ENST00000563560 MCOLN1Q9GZU1 580 aa17.97■□□□□ 0.47
RPUSD1-204ENST00000563560 ZCCHC17Q9NP64 241 aaKnown RBP17.97■□□□□ 0.47
RPUSD1-204ENST00000563560 PI4KBQ9UBF8 816 aa17.97■□□□□ 0.47
RPUSD1-204ENST00000563560 PALD1Q9ULE6 856 aa17.97■□□□□ 0.47
RPUSD1-204ENST00000563560 CETPP11597 493 aa17.96■□□□□ 0.47
RPUSD1-204ENST00000563560 CAP2P40123 477 aa17.96■□□□□ 0.47
RPUSD1-204ENST00000563560 EVX2Q03828 476 aa17.96■□□□□ 0.47
RPUSD1-204ENST00000563560 SNAPC2Q13487 334 aa17.96■□□□□ 0.47
RPUSD1-204ENST00000563560 LCORLQ8N3X6 602 aa17.96■□□□□ 0.47
RPUSD1-204ENST00000563560 NOL10Q9BSC4 688 aaKnown RBP17.96■□□□□ 0.47
RPUSD1-204ENST00000563560 MGAMO43451 1857 aa17.95■□□□□ 0.46
RPUSD1-204ENST00000563560 A0A0G2JLL6 359 aaPredicted RBP17.95■□□□□ 0.46
RPUSD1-204ENST00000563560 CXCL11O14625 94 aa17.95■□□□□ 0.46
RPUSD1-204ENST00000563560 UBE3CQ15386 1083 aa17.95■□□□□ 0.46
RPUSD1-204ENST00000563560 SHROOM1Q2M3G4 852 aaPredicted RBP17.95■□□□□ 0.46
RPUSD1-204ENST00000563560 PRRT2Q7Z6L0 340 aaPredicted RBP17.95■□□□□ 0.46
RPUSD1-204ENST00000563560 CCDC84Q86UT8 332 aaPredicted RBP17.95■□□□□ 0.46
RPUSD1-204ENST00000563560 ABHD8Q96I13 439 aa17.95■□□□□ 0.46
RPUSD1-204ENST00000563560 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.95■□□□□ 0.46
RPUSD1-204ENST00000563560 TTC41PQ6P2S7 1318 aa17.95■□□□□ 0.46
RPUSD1-204ENST00000563560 MAGEB6P1A0A0J9YX57 407 aa17.94■□□□□ 0.46
RPUSD1-204ENST00000563560 GABPAQ06546 454 aa17.94■□□□□ 0.46
RPUSD1-204ENST00000563560 FOXP4Q8IVH2 680 aaPredicted RBP17.94■□□□□ 0.46
RPUSD1-204ENST00000563560 SMC5Q8IY18 1101 aa17.94■□□□□ 0.46
RPUSD1-204ENST00000563560 EHD4Q9H223 541 aa17.94■□□□□ 0.46
RPUSD1-204ENST00000563560 SUPT16HQ9Y5B9 1047 aaKnown RBP17.94■□□□□ 0.46
RPUSD1-204ENST00000563560 ZHX2Q9Y6X8 837 aa17.94■□□□□ 0.46
RPUSD1-204ENST00000563560 GREB1LQ9C091 1923 aaPredicted RBP17.94■□□□□ 0.46
RPUSD1-204ENST00000563560 IGHDP01880 384 aa17.93■□□□□ 0.46
RPUSD1-204ENST00000563560 TATDN1Q6P1N9 297 aa17.93■□□□□ 0.46
RPUSD1-204ENST00000563560 ANKRD23Q86SG2 305 aa17.93■□□□□ 0.46
RPUSD1-204ENST00000563560 KBTBD3Q8NAB2 608 aa17.93■□□□□ 0.46
RPUSD1-204ENST00000563560 GCC1Q96CN9 775 aa17.93■□□□□ 0.46
RPUSD1-204ENST00000563560 BCL11AQ9H165 835 aa17.93■□□□□ 0.46
RPUSD1-204ENST00000563560 SAP30BPQ9UHR5 308 aaKnown RBP17.93■□□□□ 0.46
RPUSD1-204ENST00000563560 FKTNO75072 461 aa17.92■□□□□ 0.46
RPUSD1-204ENST00000563560 PLCD1P51178 756 aa17.92■□□□□ 0.46
RPUSD1-204ENST00000563560 DGKZQ13574 1117 aa17.92■□□□□ 0.46
RPUSD1-204ENST00000563560 OTUD7BQ6GQQ9 843 aa17.92■□□□□ 0.46
RPUSD1-204ENST00000563560 CTU1Q7Z7A3 348 aaKnown RBP17.92■□□□□ 0.46
RPUSD1-204ENST00000563560 PUS7LQ9H0K6 701 aaKnown RBP17.92■□□□□ 0.46
RPUSD1-204ENST00000563560 DCP1AQ9NPI6 582 aaPredicted RBP17.92■□□□□ 0.46
RPUSD1-204ENST00000563560 STAP2Q9UGK3 403 aa17.92■□□□□ 0.46
RPUSD1-204ENST00000563560 PRKAB2O43741 272 aa17.91■□□□□ 0.46
RPUSD1-204ENST00000563560 SDR42E1Q8WUS8 393 aa17.91■□□□□ 0.46
RPUSD1-204ENST00000563560 ARMT1Q9H993 441 aa17.91■□□□□ 0.46
RPUSD1-204ENST00000563560 TNRC18O15417 2968 aaPredicted RBP17.9■□□□□ 0.46
RPUSD1-204ENST00000563560 SMIM22K7EJ46 135 aa17.9■□□□□ 0.46
RPUSD1-204ENST00000563560 TLR2O60603 784 aa17.9■□□□□ 0.46
RPUSD1-204ENST00000563560 MBD4O95243 580 aa17.9■□□□□ 0.46
RPUSD1-204ENST00000563560 SHMT1P34896 483 aa17.9■□□□□ 0.46
RPUSD1-204ENST00000563560 USP5P45974 858 aa17.9■□□□□ 0.46
RPUSD1-204ENST00000563560 TAF1CQ15572 869 aaPredicted RBP17.9■□□□□ 0.46
RPUSD1-204ENST00000563560 SLC4A8Q2Y0W8 1093 aa17.9■□□□□ 0.46
RPUSD1-204ENST00000563560 C17orf99Q6UX52 265 aa17.9■□□□□ 0.46
RPUSD1-204ENST00000563560 PICK1Q9NRD5 415 aa17.9■□□□□ 0.46
RPUSD1-204ENST00000563560 PDHXO00330 501 aa17.89■□□□□ 0.45
RPUSD1-204ENST00000563560 MX1P20591 662 aa17.89■□□□□ 0.45
RPUSD1-204ENST00000563560 SH3D19Q5HYK7 790 aa17.89■□□□□ 0.45
RPUSD1-204ENST00000563560 OSBP2Q969R2 916 aa17.89■□□□□ 0.45
RPUSD1-204ENST00000563560 WDR18Q9BV38 432 aa17.89■□□□□ 0.45
RPUSD1-204ENST00000563560 CRNKL1Q9BZJ0 848 aaKnown RBP17.89■□□□□ 0.45
RPUSD1-204ENST00000563560 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.89■□□□□ 0.45
RPUSD1-204ENST00000563560 SERPINB13Q9UIV8 391 aa17.89■□□□□ 0.45
RPUSD1-204ENST00000563560 RLFQ13129 1914 aa17.89■□□□□ 0.45
RPUSD1-204ENST00000563560 RBBP6Q7Z6E9 1792 aaKnown RBP17.89■□□□□ 0.45
RPUSD1-204ENST00000563560 CTGFP29279 349 aa17.88■□□□□ 0.45
RPUSD1-204ENST00000563560 GUCY1A2P33402 732 aa17.88■□□□□ 0.45
RPUSD1-204ENST00000563560 ANKRD45Q5TZF3 282 aa17.88■□□□□ 0.45
RPUSD1-204ENST00000563560 TBC1D2Q9BYX2 928 aa17.88■□□□□ 0.45
RPUSD1-204ENST00000563560 ZFYVE28Q9HCC9 887 aa17.88■□□□□ 0.45
RPUSD1-204ENST00000563560 GINM1Q9NU53 330 aa17.88■□□□□ 0.45
RPUSD1-204ENST00000563560 ZBTB21Q9ULJ3 1066 aa17.88■□□□□ 0.45
RPUSD1-204ENST00000563560 SLC45A1Q9Y2W3 748 aa17.88■□□□□ 0.45
RPUSD1-204ENST00000563560 PARP14Q460N5 1801 aa17.88■□□□□ 0.45
RPUSD1-204ENST00000563560 DOCK3Q8IZD9 2030 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms