RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 HIRIP3Q9BW71 556 aaPredicted RBP7.27□□□□□ -1.25
CNOT1-205ENST00000563283 CARD10Q9BWT7 1032 aa7.27□□□□□ -1.25
CNOT1-205ENST00000563283 FOXD3Q9UJU5 478 aaPredicted RBP7.27□□□□□ -1.25
CNOT1-205ENST00000563283 H3BRB1 525 aa7.26□□□□□ -1.25
CNOT1-205ENST00000563283 EDN3P14138 238 aa7.26□□□□□ -1.25
CNOT1-205ENST00000563283 RETREG2Q8NC44 543 aa7.26□□□□□ -1.25
CNOT1-205ENST00000563283 WNT8BQ93098 351 aa7.26□□□□□ -1.25
CNOT1-205ENST00000563283 HHIPQ96QV1 700 aa7.26□□□□□ -1.25
CNOT1-205ENST00000563283 TUT1Q9H6E5 874 aaKnown RBP7.26□□□□□ -1.25
CNOT1-205ENST00000563283 KCNK4Q9NYG8 393 aa7.26□□□□□ -1.25
CNOT1-205ENST00000563283 RGS17Q9UGC6 210 aaPredicted RBP7.26□□□□□ -1.25
CNOT1-205ENST00000563283 MED1Q15648 1581 aaPredicted RBP7.25□□□□□ -1.25
CNOT1-205ENST00000563283 PXDNQ92626 1479 aa7.25□□□□□ -1.25
CNOT1-205ENST00000563283 GPRASP1Q5JY77 1395 aa7.25□□□□□ -1.25
CNOT1-205ENST00000563283 TRPA1O75762 1119 aa7.25□□□□□ -1.25
CNOT1-205ENST00000563283 WISP1O95388 367 aa7.25□□□□□ -1.25
CNOT1-205ENST00000563283 CDC25BP30305 580 aa7.25□□□□□ -1.25
CNOT1-205ENST00000563283 CABP4P57796 275 aa7.25□□□□□ -1.25
CNOT1-205ENST00000563283 ECM1Q16610 540 aa7.25□□□□□ -1.25
CNOT1-205ENST00000563283 GLYCTKQ8IVS8 523 aa7.25□□□□□ -1.25
CNOT1-205ENST00000563283 AGGF1Q8N302 714 aaeCLIP7.25□□□□□ -1.25
CNOT1-205ENST00000563283 ZKSCAN3Q9BRR0 538 aa7.25□□□□□ -1.25
CNOT1-205ENST00000563283 SEC31BQ9NQW1 1179 aa7.25□□□□□ -1.25
CNOT1-205ENST00000563283 POGKQ9P215 609 aa7.25□□□□□ -1.25
CNOT1-205ENST00000563283 SOX13Q9UN79 622 aa7.25□□□□□ -1.25
CNOT1-205ENST00000563283 TIMELESSQ9UNS1 1208 aa7.25□□□□□ -1.25
CNOT1-205ENST00000563283 SHPRHQ149N8 1683 aa7.25□□□□□ -1.25
CNOT1-205ENST00000563283 QRICH2Q9H0J4 1663 aa7.25□□□□□ -1.25
CNOT1-205ENST00000563283 LRP6O75581 1613 aa7.24□□□□□ -1.25
CNOT1-205ENST00000563283 TULP4Q9NRJ4 1543 aa7.24□□□□□ -1.25
CNOT1-205ENST00000563283 XPCQ01831 940 aaPredicted RBP7.24□□□□□ -1.25
CNOT1-205ENST00000563283 PDE4CQ08493 712 aa7.24□□□□□ -1.25
CNOT1-205ENST00000563283 PRR23CQ6ZRP0 262 aa7.24□□□□□ -1.25
CNOT1-205ENST00000563283 ACAD11Q709F0 780 aa7.24□□□□□ -1.25
CNOT1-205ENST00000563283 FOXD4L4Q8WXT5 416 aaPredicted RBP7.24□□□□□ -1.25
CNOT1-205ENST00000563283 NXPE3Q969Y0 559 aa7.24□□□□□ -1.25
CNOT1-205ENST00000563283 OSMRQ99650 979 aa7.24□□□□□ -1.25
CNOT1-205ENST00000563283 ZFYVE28Q9HCC9 887 aa7.24□□□□□ -1.25
CNOT1-205ENST00000563283 OSGEPQ9NPF4 335 aa7.24□□□□□ -1.25
CNOT1-205ENST00000563283 RALGAPBQ86X10 1494 aa7.24□□□□□ -1.25
CNOT1-205ENST00000563283 TOPAZ1Q8N9V7 1692 aa7.23□□□□□ -1.25
CNOT1-205ENST00000563283 ADAM11O75078 769 aa7.23□□□□□ -1.25
CNOT1-205ENST00000563283 GLB1P16278 677 aa7.23□□□□□ -1.25
CNOT1-205ENST00000563283 KLHDC7BQ96G42 594 aa7.23□□□□□ -1.25
CNOT1-205ENST00000563283 CDK19Q9BWU1 502 aa7.23□□□□□ -1.25
CNOT1-205ENST00000563283 BHLHE41Q9C0J9 482 aaPredicted RBP7.23□□□□□ -1.25
CNOT1-205ENST00000563283 ATP7BP35670 1465 aa7.23□□□□□ -1.25
CNOT1-205ENST00000563283 TRPM3Q9HCF6 1732 aaPredicted RBP7.22□□□□□ -1.25
CNOT1-205ENST00000563283 ANKARQ7Z5J8 1434 aa7.22□□□□□ -1.25
CNOT1-205ENST00000563283 ARHGAP4P98171 946 aa7.22□□□□□ -1.25
CNOT1-205ENST00000563283 PEAR1Q5VY43 1037 aaPredicted RBP7.22□□□□□ -1.25
CNOT1-205ENST00000563283 KIAA1211Q6ZU35 1233 aa7.22□□□□□ -1.25
CNOT1-205ENST00000563283 BSNDQ8WZ55 320 aa7.22□□□□□ -1.25
CNOT1-205ENST00000563283 BRPF3Q9ULD4 1205 aa7.22□□□□□ -1.25
CNOT1-205ENST00000563283 COL22A1Q8NFW1 1626 aaPredicted RBP7.22□□□□□ -1.25
CNOT1-205ENST00000563283 ROCK2O75116 1388 aaKnown RBP7.21□□□□□ -1.25
CNOT1-205ENST00000563283 PNPLA6Q8IY17 1366 aa7.21□□□□□ -1.25
CNOT1-205ENST00000563283 JCADQ9P266 1359 aa7.21□□□□□ -1.25
CNOT1-205ENST00000563283 DDX3YO15523 660 aaKnown RBP7.21□□□□□ -1.26
CNOT1-205ENST00000563283 DUOXA2Q1HG44 320 aa7.21□□□□□ -1.26
CNOT1-205ENST00000563283 PMFBP1Q8TBY8 1022 aa7.21□□□□□ -1.26
CNOT1-205ENST00000563283 UBASH3BQ8TF42 649 aa7.21□□□□□ -1.26
CNOT1-205ENST00000563283 TESK2Q96S53 571 aa7.21□□□□□ -1.26
CNOT1-205ENST00000563283 UBL7Q96S82 380 aaPredicted RBP7.21□□□□□ -1.26
CNOT1-205ENST00000563283 CEP41Q9BYV8 373 aa7.21□□□□□ -1.26
CNOT1-205ENST00000563283 LATS2Q9NRM7 1088 aa7.21□□□□□ -1.26
CNOT1-205ENST00000563283 KIF1AQ12756 1690 aa7.21□□□□□ -1.26
CNOT1-205ENST00000563283 CENPJQ9HC77 1338 aaPredicted RBP7.21□□□□□ -1.26
CNOT1-205ENST00000563283 NDUFB5O43674 189 aa7.2□□□□□ -1.26
CNOT1-205ENST00000563283 UVSSAQ2YD98 709 aa7.2□□□□□ -1.26
CNOT1-205ENST00000563283 KRT28Q7Z3Y7 464 aa7.2□□□□□ -1.26
CNOT1-205ENST00000563283 VN1R5Q7Z5H4 357 aa7.2□□□□□ -1.26
CNOT1-205ENST00000563283 LRRC59Q96AG4 307 aaKnown RBP7.2□□□□□ -1.26
CNOT1-205ENST00000563283 FAM129BQ96TA1 746 aa7.2□□□□□ -1.26
CNOT1-205ENST00000563283 CARD11Q9BXL7 1154 aa7.2□□□□□ -1.26
CNOT1-205ENST00000563283 DISP3Q9P2K9 1392 aa7.2□□□□□ -1.26
CNOT1-205ENST00000563283 ALS2Q96Q42 1657 aa7.19□□□□□ -1.26
CNOT1-205ENST00000563283 CRYBG1Q9Y4K1 1723 aa7.19□□□□□ -1.26
CNOT1-205ENST00000563283 SCO2A0A1W2PP80 73 aa7.19□□□□□ -1.26
CNOT1-205ENST00000563283 POLR3DP05423 398 aaPredicted RBP7.19□□□□□ -1.26
CNOT1-205ENST00000563283 ZEB1P37275 1124 aaPredicted RBP7.19□□□□□ -1.26
CNOT1-205ENST00000563283 ARL4DP49703 201 aa7.19□□□□□ -1.26
CNOT1-205ENST00000563283 C19orf57Q0VDD7 668 aa7.19□□□□□ -1.26
CNOT1-205ENST00000563283 GALNT12Q8IXK2 581 aa7.19□□□□□ -1.26
CNOT1-205ENST00000563283 SLC7A3Q8WY07 619 aa7.19□□□□□ -1.26
CNOT1-205ENST00000563283 SPATA31A3Q5VYP0 1347 aa7.19□□□□□ -1.26
CNOT1-205ENST00000563283 ST20-MTHFSA0A0A6YYL1 179 aa7.18□□□□□ -1.26
CNOT1-205ENST00000563283 SOX1O00570 391 aaPredicted RBP7.18□□□□□ -1.26
CNOT1-205ENST00000563283 NEFLP07196 543 aa7.18□□□□□ -1.26
CNOT1-205ENST00000563283 NLRP12P59046 1061 aa7.18□□□□□ -1.26
CNOT1-205ENST00000563283 PDE3BQ13370 1112 aa7.18□□□□□ -1.26
CNOT1-205ENST00000563283 IKBKEQ14164 716 aa7.18□□□□□ -1.26
CNOT1-205ENST00000563283 HGSNATQ68CP4 663 aa7.18□□□□□ -1.26
CNOT1-205ENST00000563283 SLC51AQ86UW1 340 aa7.18□□□□□ -1.26
CNOT1-205ENST00000563283 ARMC10Q8N2F6 343 aa7.18□□□□□ -1.26
CNOT1-205ENST00000563283 ASAP3Q8TDY4 903 aa7.18□□□□□ -1.26
CNOT1-205ENST00000563283 FAM46AQ96IP4 442 aaKnown RBP7.18□□□□□ -1.26
CNOT1-205ENST00000563283 CITED4Q96RK1 184 aa7.18□□□□□ -1.26
CNOT1-205ENST00000563283 SOX17Q9H6I2 414 aaPredicted RBP7.18□□□□□ -1.26
CNOT1-205ENST00000563283 RAXQ9Y2V3 346 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms