RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 DPY19L2Q6NUT2 758 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 LARGE2Q8N3Y3 721 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 FNBP1Q96RU3 617 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 ACBD3Q9H3P7 528 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 NCOA1Q15788 1441 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 TMEM247A6NEH6 219 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 B4DLN1 442 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 TBC1D8O95759 1140 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 RBP3P10745 1247 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 CD53P19397 219 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 CNGA1P29973 690 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 GNAI1P63096 354 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 PIP4K2BP78356 416 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 COX10Q12887 443 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 ITGA7Q13683 1181 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 SPECC1Q5M775 1068 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 SPDYCQ5MJ68 293 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 ZNF804AQ7Z570 1209 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 GALNT15Q8N3T1 639 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 DTNBP1Q96EV8 351 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 CDCA7LQ96GN5 454 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 RHBDL2Q9NX52 303 aa10.57□□□□□ -0.72
CDH1-205ENST00000562836 TUBA8Q9NY65 449 aaPredicted RBP10.57□□□□□ -0.72
CDH1-205ENST00000562836 THOC2Q8NI27 1593 aaKnown RBP10.56□□□□□ -0.72
CDH1-205ENST00000562836 DIAPH1O60610 1272 aaKnown RBP10.56□□□□□ -0.72
CDH1-205ENST00000562836 SMIM24O75264 130 aa10.56□□□□□ -0.72
CDH1-205ENST00000562836 CD2BP2O95400 341 aaKnown RBP10.56□□□□□ -0.72
CDH1-205ENST00000562836 CNGA3Q16281 694 aa10.56□□□□□ -0.72
CDH1-205ENST00000562836 SH2D4BQ5SQS7 431 aa10.56□□□□□ -0.72
CDH1-205ENST00000562836 NBPF14Q5TI25 921 aa10.56□□□□□ -0.72
CDH1-205ENST00000562836 ESX1Q8N693 406 aa10.56□□□□□ -0.72
CDH1-205ENST00000562836 EPSTI1Q96J88 318 aa10.56□□□□□ -0.72
CDH1-205ENST00000562836 CDHR1Q96JP9 859 aa10.56□□□□□ -0.72
CDH1-205ENST00000562836 VPS33BQ9H267 617 aa10.56□□□□□ -0.72
CDH1-205ENST00000562836 LNPEPQ9UIQ6 1025 aa10.56□□□□□ -0.72
CDH1-205ENST00000562836 SLC30A1Q9Y6M5 507 aa10.56□□□□□ -0.72
CDH1-205ENST00000562836 CUL7Q14999 1698 aa10.56□□□□□ -0.72
CDH1-205ENST00000562836 VIRMAQ69YN4 1812 aaKnown RBP10.56□□□□□ -0.72
CDH1-205ENST00000562836 TRIM43BA6NCK2 446 aa10.56□□□□□ -0.72
CDH1-205ENST00000562836 FAM25EA8MYX2 175 aa10.56□□□□□ -0.72
CDH1-205ENST00000562836 SUPT3HO75486 399 aa10.56□□□□□ -0.72
CDH1-205ENST00000562836 SMNDC1O75940 238 aaKnown RBP eCLIP10.56□□□□□ -0.72
CDH1-205ENST00000562836 PPP1R15BQ5SWA1 713 aa10.56□□□□□ -0.72
CDH1-205ENST00000562836 C3orf67Q6ZVT6 689 aa10.56□□□□□ -0.72
CDH1-205ENST00000562836 TRIM58Q8NG06 486 aa10.56□□□□□ -0.72
CDH1-205ENST00000562836 CLIC6Q96NY7 704 aa10.56□□□□□ -0.72
CDH1-205ENST00000562836 EVI5O60447 810 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 STAM2O75886 525 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 PI16Q6UXB8 463 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 BZW1Q7L1Q6 419 aaKnown RBP10.55□□□□□ -0.72
CDH1-205ENST00000562836 SIX5Q8N196 739 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 LINC00469Q8N7U9 141 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 IL17RAQ96F46 866 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 NEK1Q96PY6 1258 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 ZWILCHQ9H900 591 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 KLC4Q9NSK0 619 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 EFR3BQ9Y2G0 817 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 CHMP3Q9Y3E7 222 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 INSRP06213 1382 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 GCC2Q8IWJ2 1684 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 MCM3P25205 808 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 TAF7Q15545 349 aaPredicted RBP10.55□□□□□ -0.72
CDH1-205ENST00000562836 TMEM53Q6P2H8 277 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 DPH6Q7L8W6 267 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 NT5DC4Q86YG4 428 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 UBXN4Q92575 508 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 GOLGA1Q92805 767 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 ATP6V0A1Q93050 837 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 ZHX3Q9H4I2 956 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 TPCN1Q9ULQ1 816 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 CCDC7Q96M83 1385 aa10.55□□□□□ -0.72
CDH1-205ENST00000562836 SUPT6HQ7KZ85 1726 aaKnown RBP10.55□□□□□ -0.72
CDH1-205ENST00000562836 RASA4BC9J798 803 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 PCNAP12004 261 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 GUCY2FP51841 1108 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 EFCAB2Q5VUJ9 269 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 RASGRP2Q7LDG7 609 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 KRT27Q7Z3Y8 459 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 MIGA1Q8NAN2 632 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 ZNF280CQ8ND82 737 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 HELQQ8TDG4 1101 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.54□□□□□ -0.72
CDH1-205ENST00000562836 ZFAND2BQ8WV99 257 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 ABCG4Q9H172 646 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 FBXL5Q9UKA1 691 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 NSFL1CQ9UNZ2 370 aaKnown RBP10.54□□□□□ -0.72
CDH1-205ENST00000562836 ABCA10Q8WWZ4 1543 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 GOLGA8AA7E2F4 631 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 TEX28O15482 410 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 PRLRP16471 622 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 CCT8P50990 548 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 PSMD7P51665 324 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 PHEXP78562 749 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 DCTN1Q14203 1278 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 FCHSD1Q86WN1 690 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 SNX32Q86XE0 403 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 GRAMD2AQ8IUY3 354 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 CTAGE1Q96RT6 745 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 GLT8D2Q9H1C3 349 aa10.54□□□□□ -0.72
CDH1-205ENST00000562836 MRPL46Q9H2W6 279 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms