RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 NAA16Q6N069 864 aaPredicted RBP11.36□□□□□ -0.59
CHRFAM7A-204ENST00000562729 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.36□□□□□ -0.59
CHRFAM7A-204ENST00000562729 CTU1Q7Z7A3 348 aaKnown RBP11.36□□□□□ -0.59
CHRFAM7A-204ENST00000562729 ERO1BQ86YB8 467 aa11.36□□□□□ -0.59
CHRFAM7A-204ENST00000562729 RPAP2Q8IXW5 612 aaPredicted RBP11.36□□□□□ -0.59
CHRFAM7A-204ENST00000562729 ZNF687Q8N1G0 1237 aa11.36□□□□□ -0.59
CHRFAM7A-204ENST00000562729 ZNF296Q8WUU4 475 aaPredicted RBP11.36□□□□□ -0.59
CHRFAM7A-204ENST00000562729 RNF166Q96A37 237 aaPredicted RBP11.36□□□□□ -0.59
CHRFAM7A-204ENST00000562729 YTHDC1Q96MU7 727 aaKnown RBP11.36□□□□□ -0.59
CHRFAM7A-204ENST00000562729 NOP58Q9Y2X3 529 aaKnown RBP11.36□□□□□ -0.59
CHRFAM7A-204ENST00000562729 GAKO14976 1311 aa11.35□□□□□ -0.59
CHRFAM7A-204ENST00000562729 IFIT2P09913 472 aaKnown RBP11.35□□□□□ -0.59
CHRFAM7A-204ENST00000562729 CETPP11597 493 aa11.35□□□□□ -0.59
CHRFAM7A-204ENST00000562729 SNAPC2Q13487 334 aa11.35□□□□□ -0.59
CHRFAM7A-204ENST00000562729 CLASRPQ8N2M8 674 aaKnown RBP11.35□□□□□ -0.59
CHRFAM7A-204ENST00000562729 NSUN4Q96CB9 384 aaKnown RBP11.35□□□□□ -0.59
CHRFAM7A-204ENST00000562729 TRIM34Q9BYJ4 488 aa11.35□□□□□ -0.59
CHRFAM7A-204ENST00000562729 PICK1Q9NRD5 415 aa11.35□□□□□ -0.59
CHRFAM7A-204ENST00000562729 FAM198AQ9UFP1 575 aa11.35□□□□□ -0.59
CHRFAM7A-204ENST00000562729 GPR75-ASB3A0A0A6YYF3 556 aa11.34□□□□□ -0.59
CHRFAM7A-204ENST00000562729 SPDYE5A6NIY4 337 aa11.34□□□□□ -0.59
CHRFAM7A-204ENST00000562729 IGF2BP3O00425 579 aaKnown RBP eCLIP11.34□□□□□ -0.59
CHRFAM7A-204ENST00000562729 IDH1O75874 414 aaKnown RBP11.34□□□□□ -0.59
CHRFAM7A-204ENST00000562729 MAP4K4O95819 1239 aaPredicted RBP11.34□□□□□ -0.59
CHRFAM7A-204ENST00000562729 GJA5P36382 358 aa11.34□□□□□ -0.59
CHRFAM7A-204ENST00000562729 PDE3AQ14432 1141 aa11.34□□□□□ -0.59
CHRFAM7A-204ENST00000562729 PKN2Q16513 984 aaKnown RBP11.34□□□□□ -0.59
CHRFAM7A-204ENST00000562729 TEX11Q8IYF3 940 aa11.34□□□□□ -0.59
CHRFAM7A-204ENST00000562729 IDI2Q9BXS1 227 aa11.34□□□□□ -0.59
CHRFAM7A-204ENST00000562729 IL1RAPL2Q9NP60 686 aa11.34□□□□□ -0.59
CHRFAM7A-204ENST00000562729 DBNLQ9UJU6 430 aaKnown RBP11.34□□□□□ -0.59
CHRFAM7A-204ENST00000562729 SNCAIPQ9Y6H5 919 aa11.34□□□□□ -0.59
CHRFAM7A-204ENST00000562729 DOCK2Q92608 1830 aa11.33□□□□□ -0.6
CHRFAM7A-204ENST00000562729 INPP5BP32019 993 aa11.33□□□□□ -0.6
CHRFAM7A-204ENST00000562729 ZAP70P43403 619 aa11.33□□□□□ -0.6
CHRFAM7A-204ENST00000562729 PPATQ06203 517 aa11.33□□□□□ -0.6
CHRFAM7A-204ENST00000562729 PPIL2Q13356 520 aa11.33□□□□□ -0.6
CHRFAM7A-204ENST00000562729 ARHGEF6Q15052 776 aa11.33□□□□□ -0.6
CHRFAM7A-204ENST00000562729 TAF1CQ15572 869 aaPredicted RBP11.33□□□□□ -0.6
CHRFAM7A-204ENST00000562729 ZFPM1Q8IX07 1006 aa11.33□□□□□ -0.6
CHRFAM7A-204ENST00000562729 RHPN1Q8TCX5 695 aa11.33□□□□□ -0.6
CHRFAM7A-204ENST00000562729 EAF2Q96CJ1 260 aaPredicted RBP11.33□□□□□ -0.6
CHRFAM7A-204ENST00000562729 KIF1BPQ96EK5 621 aa11.33□□□□□ -0.6
CHRFAM7A-204ENST00000562729 ERO1AQ96HE7 468 aa11.33□□□□□ -0.6
CHRFAM7A-204ENST00000562729 ZFYVE28Q9HCC9 887 aa11.33□□□□□ -0.6
CHRFAM7A-204ENST00000562729 ZBTB40Q9NUA8 1239 aa11.33□□□□□ -0.6
CHRFAM7A-204ENST00000562729 AATFQ9NY61 560 aaKnown RBP eCLIP11.33□□□□□ -0.6
CHRFAM7A-204ENST00000562729 TLR7Q9NYK1 1049 aaKnown RBP11.33□□□□□ -0.6
CHRFAM7A-204ENST00000562729 MAST2Q6P0Q8 1798 aa11.32□□□□□ -0.6
CHRFAM7A-204ENST00000562729 RAB11FIP3O75154 756 aa11.32□□□□□ -0.6
CHRFAM7A-204ENST00000562729 CYP2E1P05181 493 aaPredicted RBP11.32□□□□□ -0.6
CHRFAM7A-204ENST00000562729 MAP3K12Q12852 859 aa11.32□□□□□ -0.6
CHRFAM7A-204ENST00000562729 CRHR2Q13324 411 aa11.32□□□□□ -0.6
CHRFAM7A-204ENST00000562729 NOM1Q5C9Z4 860 aaKnown RBP11.32□□□□□ -0.6
CHRFAM7A-204ENST00000562729 ZNF512BQ96KM6 892 aaPredicted RBP11.32□□□□□ -0.6
CHRFAM7A-204ENST00000562729 CFHR5Q9BXR6 569 aa11.32□□□□□ -0.6
CHRFAM7A-204ENST00000562729 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.32□□□□□ -0.6
CHRFAM7A-204ENST00000562729 TESPA1A2RU30 521 aaPredicted RBP11.31□□□□□ -0.6
CHRFAM7A-204ENST00000562729 IRF6O14896 467 aa11.31□□□□□ -0.6
CHRFAM7A-204ENST00000562729 CYP7A1P22680 504 aa11.31□□□□□ -0.6
CHRFAM7A-204ENST00000562729 SP3Q02447 781 aa11.31□□□□□ -0.6
CHRFAM7A-204ENST00000562729 KIF22Q14807 665 aa11.31□□□□□ -0.6
CHRFAM7A-204ENST00000562729 TTF1Q15361 905 aaPredicted RBP11.31□□□□□ -0.6
CHRFAM7A-204ENST00000562729 SCYL3Q8IZE3 742 aa11.31□□□□□ -0.6
CHRFAM7A-204ENST00000562729 CRACR2BQ8N4Y2 399 aaPredicted RBP11.31□□□□□ -0.6
CHRFAM7A-204ENST00000562729 SH3RF3Q8TEJ3 882 aaPredicted RBP11.31□□□□□ -0.6
CHRFAM7A-204ENST00000562729 BRI3BPQ8WY22 251 aa11.31□□□□□ -0.6
CHRFAM7A-204ENST00000562729 DNAJC2Q99543 621 aaKnown RBP11.31□□□□□ -0.6
CHRFAM7A-204ENST00000562729 PTPN18Q99952 460 aa11.31□□□□□ -0.6
CHRFAM7A-204ENST00000562729 DDX4Q9NQI0 724 aaKnown RBP11.31□□□□□ -0.6
CHRFAM7A-204ENST00000562729 TRIM17Q9Y577 477 aa11.31□□□□□ -0.6
CHRFAM7A-204ENST00000562729 DDTLA6NHG4 134 aaPredicted RBP11.3□□□□□ -0.6
CHRFAM7A-204ENST00000562729 IGSF3O75054 1194 aa11.3□□□□□ -0.6
CHRFAM7A-204ENST00000562729 HLA-DOAP06340 250 aa11.3□□□□□ -0.6
CHRFAM7A-204ENST00000562729 USP5P45974 858 aa11.3□□□□□ -0.6
CHRFAM7A-204ENST00000562729 RHBDL3P58872 404 aa11.3□□□□□ -0.6
CHRFAM7A-204ENST00000562729 C20orf194Q5TEA3 1177 aa11.3□□□□□ -0.6
CHRFAM7A-204ENST00000562729 CERS3Q8IU89 383 aa11.3□□□□□ -0.6
CHRFAM7A-204ENST00000562729 MAGEB6Q8N7X4 407 aa11.3□□□□□ -0.6
CHRFAM7A-204ENST00000562729 TGFBRAP1Q8WUH2 860 aa11.3□□□□□ -0.6
CHRFAM7A-204ENST00000562729 OSBPL5Q9H0X9 879 aaPredicted RBP11.3□□□□□ -0.6
CHRFAM7A-204ENST00000562729 R3HDMLQ9H3Y0 253 aa11.3□□□□□ -0.6
CHRFAM7A-204ENST00000562729 PIH1D3Q9NQM4 214 aaKnown RBP11.3□□□□□ -0.6
CHRFAM7A-204ENST00000562729 ZNF112Q9UJU3 913 aa11.3□□□□□ -0.6
CHRFAM7A-204ENST00000562729 ZHX2Q9Y6X8 837 aa11.3□□□□□ -0.6
CHRFAM7A-204ENST00000562729 LAMB1P07942 1786 aa11.3□□□□□ -0.6
CHRFAM7A-204ENST00000562729 CTNND1O60716 968 aaKnown RBP11.29□□□□□ -0.6
CHRFAM7A-204ENST00000562729 ARSIQ5FYB1 569 aa11.29□□□□□ -0.6
CHRFAM7A-204ENST00000562729 NOL9Q5SY16 702 aaKnown RBP11.29□□□□□ -0.6
CHRFAM7A-204ENST00000562729 FBXO46Q6PJ61 603 aaPredicted RBP11.29□□□□□ -0.6
CHRFAM7A-204ENST00000562729 GADL1Q6ZQY3 521 aa11.29□□□□□ -0.6
CHRFAM7A-204ENST00000562729 MAPKAPK5Q8IW41 473 aa11.29□□□□□ -0.6
CHRFAM7A-204ENST00000562729 FAM43AQ8N2R8 423 aa11.29□□□□□ -0.6
CHRFAM7A-204ENST00000562729 MIGA1Q8NAN2 632 aa11.29□□□□□ -0.6
CHRFAM7A-204ENST00000562729 CD99L2Q8TCZ2 262 aa11.29□□□□□ -0.6
CHRFAM7A-204ENST00000562729 ZNF384Q8TF68 577 aa11.29□□□□□ -0.6
CHRFAM7A-204ENST00000562729 LRRCC1Q9C099 1032 aa11.29□□□□□ -0.6
CHRFAM7A-204ENST00000562729 DHX36Q9H2U1 1008 aaKnown RBP11.29□□□□□ -0.6
CHRFAM7A-204ENST00000562729 EFCC1Q9HA90 598 aa11.29□□□□□ -0.6
CHRFAM7A-204ENST00000562729 PI4KBQ9UBF8 816 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms